IMEx: Genome-wide Analysis

Browse Genome By Alphabetical Order: A B C D E F G H I J K L M N O P R S T U V W X Y Z Selected: N

Select Genome:

Bacterial Genome print " Nanoarchaeum equitans Kin4-M"; print " Natranaerobius thermophilus JW/NM-WN-LF plasmid pNTHE01"; print " Natranaerobius thermophilus JW/NM-WN-LF plasmid pNTHE02"; print " Natranaerobius thermophilus JW/NM-WN-LF"; print " Natronomonas pharaonis DSM 2160 plasmid PL131"; print " Natronomonas pharaonis DSM 2160 plasmid PL23"; print " Natronomonas pharaonis DSM 2160"; print " Nautilia profundicola AmH"; print " Neisseria gonorrhoeae FA 1090"; print " Neisseria gonorrhoeae NCCP11945 plasmid pNGK"; print " Neisseria gonorrhoeae NCCP11945"; print " Neisseria meningitidis 053442"; print " Neisseria meningitidis FAM18"; print " Neisseria meningitidis MC58"; print " Neisseria meningitidis Z2491"; print " Neorickettsia sennetsu str. Miyayama"; print " Nitratiruptor sp. SB155-2"; print " Nitrobacter hamburgensis X14 plasmid 1"; print " Nitrobacter hamburgensis X14 plasmid 2"; print " Nitrobacter hamburgensis X14 plasmid 3"; print " Nitrobacter hamburgensis X14"; print " Nitrobacter winogradskyi Nb-255"; print " Nitrosococcus oceani ATCC 19707 plasmid A"; print " Nitrosococcus oceani ATCC 19707"; print " Nitrosomonas europaea ATCC 19718"; print " Nitrosomonas eutropha C91 plasmid1"; print " Nitrosomonas eutropha C91 plasmid2"; print " Nitrosomonas eutropha C91"; print " Nitrosopumilus maritimus SCM1"; print " Nitrosospira multiformis ATCC 25196 chromosome 1"; print " Nitrosospira multiformis ATCC 25196 plasmid 1"; print " Nitrosospira multiformis ATCC 25196 plasmid 2"; print " Nitrosospira multiformis ATCC 25196 plasmid 3"; print " Nocardia farcinica IFM 10152 plasmid pNF1"; print " Nocardia farcinica IFM 10152 plasmid pNF2"; print " Nocardia farcinica IFM 10152"; print " Nocardioides sp. JS614 plasmid pNOCA01"; print " Nocardioides sp. JS614"; print " Nostoc punctiforme PCC 73102 plasmid pNPUN01"; print " Nostoc punctiforme PCC 73102 plasmid pNPUN02"; print " Nostoc punctiforme PCC 73102 plasmid pNPUN03"; print " Nostoc punctiforme PCC 73102 plasmid pNPUN04"; print " Nostoc punctiforme PCC 73102 plasmid pNPUN05"; print " Nostoc punctiforme PCC 73102"; print " Nostoc sp. PCC 7120 plasmid pCC7120alpha"; print " Nostoc sp. PCC 7120 plasmid pCC7120beta"; print " Nostoc sp. PCC 7120 plasmid pCC7120delta"; print " Nostoc sp. PCC 7120 plasmid pCC7120epsilon"; print " Nostoc sp. PCC 7120 plasmid pCC7120gamma"; print " Nostoc sp. PCC 7120 plasmid pCC7120zeta"; print " Nostoc sp. PCC 7120"; print " Novosphingobium aromaticivorans DSM 12444 plasmid pNL1"; print " Novosphingobium aromaticivorans DSM 12444 plasmid pNL2"; print " Novosphingobium aromaticivorans DSM 12444"; Viral Genome print " Nanovirus-like particle"; print " Narcissus common latent virus"; print " Narcissus degeneration virus"; print " Narcissus mosaic virus"; print " Narcissus symptomless virus"; print " Narcissus yellow stripe virus"; print " Natrialba phage PhiCh1"; print " Nemesia ring necrosis virus"; print " Neodiprion abietis nucleopolyhedrovirus"; print " Neodiprion lecontei NPV"; print " Neodiprion sertifer nucleopolyhedrovirus"; print " Nerine virus X"; print " Newbury agent 1 virus"; print " Newcastle disease virus"; print " Nilaparvata lugens reovirus segment 1"; print " Nilaparvata lugens reovirus segment 10"; print " Nilaparvata lugens reovirus segment 2"; print " Nilaparvata lugens reovirus segment 3"; print " Nilaparvata lugens reovirus segment 4"; print " Nilaparvata lugens reovirus segment 5"; print " Nilaparvata lugens reovirus segment 6"; print " Nilaparvata lugens reovirus segment 7"; print " Nilaparvata lugens reovirus segment 8"; print " Nilaparvata lugens reovirus segment 9"; print " Nipah virus"; print " Nodamura virus RNA1"; print " Nodamura virus RNA2"; print " Nootka lupine vein-clearing virus"; print " Nora virus"; print " Northern cereal mosaic virus"; print " Norwalk virus"; print " Nudaurelia capensis beta virus";

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Set the parameters here: Include Flanking regions 5 10 15 20 30 40 50 100 150 200 Generate Alignments Generate Text output files

Type of Repeat: Imperfect Perfect Repeat Size: All Mono Di Tri Tetra Penta Hexa Enter a Pattern :

Main parameters Mono Di Tri Tetra Penta Hexa Minimum Repeat Number: Imperfection Limit/repeat unit: 0 1 0 1 2 0 1 2 3 0 1 2 3 4 0 1 2 3 4 5 0 1 2 3 4 5 6 % Imperfection in Repeat Tract: 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50%

Extract Compound Microsatellites Max. distance allowed between any two SSRs (dMAX) (0-50)

Level of Standardization: No Standardization Level 1 Standardization Level 2 Standardization Level 3 Standardization Full / Complete Standardization

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