IMEx: Genome-wide Analysis

Browse Genome By Alphabetical Order: A B C D E F G H I J K L M N O P R S T U V W X Y Z Selected: G

Select Genome:

Bacterial Genome print " Gemmatimonas aurantiaca T-27"; print " Geobacillus kaustophilus HTA426 plasmid pHTA426"; print " Geobacillus kaustophilus HTA426"; print " Geobacillus thermodenitrificans NG80-2 plasmid pLW1071"; print " Geobacillus thermodenitrificans NG80-2"; print " Geobacter bemidjiensis Bem"; print " Geobacter lovleyi SZ plasmid pGLOV01"; print " Geobacter lovleyi SZ"; print " Geobacter metallireducens GS-15 plasmid unnamed"; print " Geobacter metallireducens GS-15"; print " Geobacter sp. FRC-32"; print " Geobacter sulfurreducens PCA"; print " Geobacter uraniireducens Rf4"; print " Gloeobacter violaceus PCC 7421"; print " Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIA01"; print " Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5I"; print " Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIPal5II"; print " Gluconacetobacter diazotrophicus PAl 5"; print " Gluconacetobacter diazotrophicus PAl 5"; print " Gluconobacter oxydans 621H plasmid pGOX1"; print " Gluconobacter oxydans 621H plasmid pGOX2"; print " Gluconobacter oxydans 621H plasmid pGOX3"; print " Gluconobacter oxydans 621H plasmid pGOX4"; print " Gluconobacter oxydans 621H plasmid pGOX5"; print " Gluconobacter oxydans 621H"; print " Gramella forsetii KT0803"; print " Granulibacter bethesdensis CGDNIH1"; Viral Genome print " GB virus C/Hepatitis G virus"; print " Galinsoga mosaic virus"; print " Galleria mellonella densovirus"; print " Gallid herpesvirus 1"; print " Gallid herpesvirus 2"; print " Gallid herpesvirus 3"; print " Garlic latent virus"; print " Garlic virus A"; print " Garlic virus C"; print " Garlic virus E"; print " Garlic virus X"; print " Geobacillus phage GBSV1"; print " Geobacillus virus E2"; print " Getah virus"; print " Giardia lamblia virus"; print " Gibbon ape leukemia virus"; print " Gill-associated virus"; print " Glossina pallidipes salivary gland hypertrophy virus"; print " Glypta fumiferanae ichnovirus segment A1"; print " Glypta fumiferanae ichnovirus segment A10"; print " Glypta fumiferanae ichnovirus segment A2"; print " Glypta fumiferanae ichnovirus segment A3"; print " Glypta fumiferanae ichnovirus segment A4"; print " Glypta fumiferanae ichnovirus segment A5"; print " Glypta fumiferanae ichnovirus segment A6"; print " Glypta fumiferanae ichnovirus segment A7"; print " Glypta fumiferanae ichnovirus segment A8"; print " Glypta fumiferanae ichnovirus segment A9"; print " Glypta fumiferanae ichnovirus segment B1"; print " Glypta fumiferanae ichnovirus segment B10"; print " Glypta fumiferanae ichnovirus segment B11"; print " Glypta fumiferanae ichnovirus segment B12"; print " Glypta fumiferanae ichnovirus segment B13"; print " Glypta fumiferanae ichnovirus segment B14"; print " Glypta fumiferanae ichnovirus segment B15"; print " Glypta fumiferanae ichnovirus segment B16"; print " Glypta fumiferanae ichnovirus segment B17"; print " Glypta fumiferanae ichnovirus segment B18"; print " Glypta fumiferanae ichnovirus segment B19"; print " Glypta fumiferanae ichnovirus segment B2"; print " Glypta fumiferanae ichnovirus segment B20"; print " Glypta fumiferanae ichnovirus segment B21"; print " Glypta fumiferanae ichnovirus segment B22"; print " Glypta fumiferanae ichnovirus segment B23"; print " Glypta fumiferanae ichnovirus segment B24"; print " Glypta fumiferanae ichnovirus segment B25"; print " Glypta fumiferanae ichnovirus segment B26"; print " Glypta fumiferanae ichnovirus segment B27"; print " Glypta fumiferanae ichnovirus segment B28"; print " Glypta fumiferanae ichnovirus segment B29"; print " Glypta fumiferanae ichnovirus segment B3"; print " Glypta fumiferanae ichnovirus segment B30"; print " Glypta fumiferanae ichnovirus segment B31"; print " Glypta fumiferanae ichnovirus segment B32"; print " Glypta fumiferanae ichnovirus segment B33"; print " Glypta fumiferanae ichnovirus segment B34"; print " Glypta fumiferanae ichnovirus segment B35"; print " Glypta fumiferanae ichnovirus segment B36"; print " Glypta fumiferanae ichnovirus segment B37"; print " Glypta fumiferanae ichnovirus segment B38"; print " Glypta fumiferanae ichnovirus segment B39"; print " Glypta fumiferanae ichnovirus segment B4"; print " Glypta fumiferanae ichnovirus segment B40"; print " Glypta fumiferanae ichnovirus segment B41"; print " Glypta fumiferanae ichnovirus segment B42"; print " Glypta fumiferanae ichnovirus segment B43"; print " Glypta fumiferanae ichnovirus segment B44"; print " Glypta fumiferanae ichnovirus segment B45"; print " Glypta fumiferanae ichnovirus segment B46"; print " Glypta fumiferanae ichnovirus segment B47"; print " Glypta fumiferanae ichnovirus segment B48"; print " Glypta fumiferanae ichnovirus segment B49"; print " Glypta fumiferanae ichnovirus segment B5"; print " Glypta fumiferanae ichnovirus segment B50"; print " Glypta fumiferanae ichnovirus segment B51"; print " Glypta fumiferanae ichnovirus segment B52"; print " Glypta fumiferanae ichnovirus segment B53"; print " Glypta fumiferanae ichnovirus segment B54"; print " Glypta fumiferanae ichnovirus segment B55"; print " Glypta fumiferanae ichnovirus segment B56"; print " Glypta fumiferanae ichnovirus segment B57"; print " Glypta fumiferanae ichnovirus segment B58"; print " Glypta fumiferanae ichnovirus segment B59"; print " Glypta fumiferanae ichnovirus segment B6"; print " Glypta fumiferanae ichnovirus segment B60"; print " Glypta fumiferanae ichnovirus segment B61"; print " Glypta fumiferanae ichnovirus segment B62"; print " Glypta fumiferanae ichnovirus segment B63"; print " Glypta fumiferanae ichnovirus segment B64"; print " Glypta fumiferanae ichnovirus segment B65"; print " Glypta fumiferanae ichnovirus segment B7"; print " Glypta fumiferanae ichnovirus segment B8"; print " Glypta fumiferanae ichnovirus segment B9"; print " Glypta fumiferanae ichnovirus segment C1"; print " Glypta fumiferanae ichnovirus segment C10"; print " Glypta fumiferanae ichnovirus segment C11"; print " Glypta fumiferanae ichnovirus segment C12"; print " Glypta fumiferanae ichnovirus segment C13"; print " Glypta fumiferanae ichnovirus segment C14"; print " Glypta fumiferanae ichnovirus segment C15"; print " Glypta fumiferanae ichnovirus segment C16"; print " Glypta fumiferanae ichnovirus segment C17"; print " Glypta fumiferanae ichnovirus segment C18"; print " Glypta fumiferanae ichnovirus segment C19"; print " Glypta fumiferanae ichnovirus segment C2"; print " Glypta fumiferanae ichnovirus segment C20"; print " Glypta fumiferanae ichnovirus segment C21"; print " Glypta fumiferanae ichnovirus segment C22"; print " Glypta fumiferanae ichnovirus segment C3"; print " Glypta fumiferanae ichnovirus segment C4"; print " Glypta fumiferanae ichnovirus segment C5"; print " Glypta fumiferanae ichnovirus segment C6"; print " Glypta fumiferanae ichnovirus segment C7"; print " Glypta fumiferanae ichnovirus segment C8"; print " Glypta fumiferanae ichnovirus segment C9"; print " Glypta fumiferanae ichnovirus segment D1"; print " Glypta fumiferanae ichnovirus segment D2"; print " Glypta fumiferanae ichnovirus segment D3"; print " Glypta fumiferanae ichnovirus segment D4"; print " Glypta fumiferanae ichnovirus segment D5"; print " Glypta fumiferanae ichnovirus segment D6"; print " Glypta fumiferanae ichnovirus segment D7"; print " Glypta fumiferanae ichnovirus segment E1"; print " Goatpox virus Pellor"; print " Golden shiner reovirus segment 1"; print " Golden shiner reovirus segment 10"; print " Golden shiner reovirus segment 11"; print " Golden shiner reovirus segment 2"; print " Golden shiner reovirus segment 3"; print " Golden shiner reovirus segment 4"; print " Golden shiner reovirus segment 5"; print " Golden shiner reovirus segment 6"; print " Golden shiner reovirus segment 7"; print " Golden shiner reovirus segment 8"; print " Golden shiner reovirus segment 9"; print " Goose circovirus"; print " Goose hemorrhagic polyomavirus"; print " Goose paramyxovirus SF02"; print " Goose parvovirus"; print " Gossypium darwinii symptomless virus DNA-A"; print " Gossypium hirsutum leaf curl virus DNA-A"; print " Gossypium punctatum mild leaf curl virus DNA A"; print " Gossypium punctatum mild leaf curl virus DNA B"; print " Grapevine Algerian latent virus"; print " Grapevine chrome mosaic virus RNA 1"; print " Grapevine chrome mosaic virus RNA 2"; print " Grapevine fanleaf virus RNA 1"; print " Grapevine fanleaf virus RNA 2"; print " Grapevine fanleaf virus satellite RNA"; print " Grapevine fleck virus"; print " Grapevine leafroll-associated virus 10"; print " Grapevine leafroll-associated virus 2"; print " Grapevine leafroll-associated virus 3"; print " Grapevine rootstock stem lesion associated virus"; print " Grapevine virus A"; print " Grapevine virus B"; print " Grapevine virus E"; print " Grapevine yellow speckle viroid 1"; print " Grapevine yellow speckle viroid 2"; print " Gremmeniella abietina RNA virus L1"; print " Gremmeniella abietina RNA virus L2"; print " Gremmeniella abietina RNA virus MS1 RNA 1"; print " Gremmeniella abietina RNA virus MS1 RNA 2"; print " Gremmeniella abietina RNA virus MS1 RNA 3"; print " Gremmeniella abietina RNA virus MS2 RNA 1"; print " Gremmeniella abietina RNA virus MS2 RNA 2"; print " Gremmeniella abietina RNA virus MS2 RNA 3"; print " Gremmeniella abietina mitochondrial RNA virus S2"; print " Gremmeniella abietina type B RNA virus XL"; print " Ground squirrel hepatitis virus"; print " Groundnut bud necrosis virus segment L"; print " Groundnut bud necrosis virus segment M"; print " Groundnut bud necrosis virus segment S"; print " Groundnut rosette virus satellite RNA"; print " Groundnut rosette virus"; print " Gryllus bimaculatus nudivirus"; print " Guanarito virus segment L"; print " Guanarito virus segment S"; print " Gull circovirus";

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Set the parameters here: Include Flanking regions 5 10 15 20 30 40 50 100 150 200 Generate Alignments Generate Text output files

Type of Repeat: Imperfect Perfect Repeat Size: All Mono Di Tri Tetra Penta Hexa Enter a Pattern :

Main parameters Mono Di Tri Tetra Penta Hexa Minimum Repeat Number: Imperfection Limit/repeat unit: 0 1 0 1 2 0 1 2 3 0 1 2 3 4 0 1 2 3 4 5 0 1 2 3 4 5 6 % Imperfection in Repeat Tract: 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50%

Extract Compound Microsatellites Max. distance allowed between any two SSRs (dMAX) (0-50)

Level of Standardization: No Standardization Level 1 Standardization Level 2 Standardization Level 3 Standardization Full / Complete Standardization

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