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From this page, you can selectively browse the isomiRs and their information deposited in Plant IsomiR Atlas by setting the Following parameters and search interested categories using the embedded searching function.

Parameters

Quick Browse

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Species
Amborella trichopoda Arabidopsis lyrata Arabidopsis thaliana Brassica rapa Carica papaya Citrus clementina Citrus sinensis Glycine max Gossypium raimondii Malus domestica Manihot esculenta Medicago truncatula Nelumbo nucifera Populus trichocarpa Solanum lycopersicum Solanum tuberosum Vitis vinifera Brachypodium distachyon Oryza sativa Setaria italica Sorghum bicolor Triticum aestivum Zea mays

Click Here to Select Species

Advanced Browse

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Species
Amborella trichopoda Arabidopsis lyrata Arabidopsis thaliana Brassica rapa Carica papaya Citrus clementina Citrus sinensis Glycine max Gossypium raimondii Malus domestica Manihot esculenta Medicago truncatula Nelumbo nucifera Populus trichocarpa Solanum lycopersicum Solanum tuberosum Vitis vinifera Brachypodium distachyon Oryza sativa Setaria italica Sorghum bicolor Triticum aestivum Zea mays

Click Here to Select Species

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Mismatch
0 1 2

Mismatches against Precursor

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Seed Corruptness
FC Fc fC fc

Corruptness of Seed Region

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Overlap
26 25 24 23 22 21 20 19 18 17 16 15 14 13 12 11 10 9 8 7 6 5 4 3 2 1 0

Overlaps with Canonical MiRNA

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Length
18 19 20 21 22 23 24 25 26

Min

     to      18 19 20 21 22 23 24 25 26

Max

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Depth
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Type
no drift 3'end addition 3'end deletion 5'end addition 5'end deletion 5'end addition and 3'end addition 5'end addition and 3'end deletion 5'end deletion and 3'end addition 5'end deletion and 3'end deletion not overlap with canonical miRNAs

Types of Interested IsomiRs

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Workflow of IsomiR Identification