List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092483 | GAC | 4 | 2660 | 2671 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85101608 |
| 2. | NW_001092483 | GGA | 4 | 3613 | 3623 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85101608 |
| 3. | NW_001092483 | GAA | 4 | 3622 | 3633 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101608 |
| 4. | NW_001092483 | AGG | 4 | 3660 | 3671 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101608 |
| 5. | NW_001092483 | CTG | 4 | 3783 | 3794 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85101608 |
| 6. | NW_001092483 | CCA | 4 | 3879 | 3890 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101608 |
| 7. | NW_001092483 | GAA | 11 | 3965 | 3997 | 33 | 66.67% | 0.00% | 33.33% | 0.00% | 85101608 |
| 8. | NW_001092483 | GAA | 8 | 4079 | 4102 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | 85101608 |
| 9. | NW_001092483 | GAG | 4 | 4442 | 4453 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101608 |
| 10. | NW_001092483 | CGG | 4 | 6915 | 6926 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101611 |
| 11. | NW_001092483 | CGG | 4 | 9477 | 9488 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101615 |
| 12. | NW_001092483 | TCT | 5 | 10130 | 10143 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | 85101615 |
| 13. | NW_001092483 | ACC | 4 | 11575 | 11585 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85101619 |
| 14. | NW_001092483 | CTG | 7 | 11710 | 11730 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85101619 |
| 15. | NW_001092483 | TGC | 4 | 11810 | 11821 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85101619 |
| 16. | NW_001092483 | GCG | 4 | 11859 | 11870 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101619 |
| 17. | NW_001092483 | CGG | 5 | 11959 | 11973 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85101619 |
| 18. | NW_001092483 | GGC | 4 | 12206 | 12217 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101619 |
| 19. | NW_001092483 | TGT | 4 | 12302 | 12313 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85101619 |
| 20. | NW_001092483 | GTG | 4 | 15050 | 15061 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 21. | NW_001092483 | ATG | 4 | 16654 | 16664 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 22. | NW_001092483 | CGT | 4 | 17565 | 17576 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 23. | NW_001092483 | GAA | 4 | 21153 | 21165 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85101628 |
| 24. | NW_001092483 | GAA | 4 | 22385 | 22396 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 25. | NW_001092483 | CAC | 4 | 23894 | 23905 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101632 |
| 26. | NW_001092483 | AGA | 4 | 24986 | 24997 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101632 |
| 27. | NW_001092483 | GTC | 4 | 27531 | 27542 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85101636 |
| 28. | NW_001092483 | GCT | 4 | 28457 | 28468 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 29. | NW_001092483 | ACC | 4 | 29402 | 29413 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 30. | NW_001092483 | AGG | 5 | 30701 | 30715 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85101640 |
| 31. | NW_001092483 | GTT | 4 | 34185 | 34195 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092483 | ACA | 4 | 36140 | 36150 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85101648 |
| 33. | NW_001092483 | TTC | 4 | 36405 | 36415 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85101648 |
| 34. | NW_001092483 | GAT | 4 | 37458 | 37469 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85101648 |
| 35. | NW_001092483 | CAA | 4 | 39262 | 39273 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85101648 |
| 36. | NW_001092483 | TTC | 4 | 40317 | 40327 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092483 | GTG | 4 | 41295 | 41306 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85101652 |
| 38. | NW_001092483 | AGG | 12 | 41405 | 41440 | 36 | 33.33% | 0.00% | 66.67% | 0.00% | 85101652 |
| 39. | NW_001092483 | TGG | 14 | 41423 | 41464 | 42 | 0.00% | 33.33% | 66.67% | 0.00% | 85101652 |
| 40. | NW_001092483 | ACG | 4 | 41692 | 41702 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85101652 |
| 41. | NW_001092483 | GCG | 4 | 42211 | 42222 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101652 |
| 42. | NW_001092483 | AGG | 4 | 42320 | 42330 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 43. | NW_001092483 | GGA | 4 | 44043 | 44054 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101656 |
| 44. | NW_001092483 | TCC | 15 | 51650 | 51694 | 45 | 0.00% | 33.33% | 0.00% | 66.67% | 85101669 |
| 45. | NW_001092483 | GAA | 4 | 51696 | 51707 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101669 |
| 46. | NW_001092483 | GGC | 5 | 51731 | 51745 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85101669 |
| 47. | NW_001092483 | GAG | 4 | 52040 | 52051 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101669 |
| 48. | NW_001092483 | TGA | 5 | 52124 | 52138 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | 85101669 |
| 49. | NW_001092483 | ACA | 8 | 52789 | 52812 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092483 | TGT | 4 | 53443 | 53454 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092483 | ACA | 4 | 53777 | 53788 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85101673 |
| 52. | NW_001092483 | CTA | 4 | 53869 | 53880 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85101673 |
| 53. | NW_001092483 | CTG | 5 | 53878 | 53891 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | 85101673 |
| 54. | NW_001092483 | TCC | 4 | 56514 | 56525 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85101677 |
| 55. | NW_001092483 | GGA | 4 | 59709 | 59720 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 56. | NW_001092483 | GGA | 4 | 61822 | 61833 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101686 |
| 57. | NW_001092483 | GGT | 4 | 62018 | 62029 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85101686 |
| 58. | NW_001092483 | ACA | 4 | 64118 | 64129 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85101696 |
| 59. | NW_001092483 | AGA | 4 | 64277 | 64288 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101696 |
| 60. | NW_001092483 | GAG | 5 | 64984 | 64998 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85101696 |
| 61. | NW_001092483 | CCA | 4 | 66119 | 66130 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101696 |
| 62. | NW_001092483 | GGA | 4 | 66246 | 66257 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101696 |
| 63. | NW_001092483 | CGC | 4 | 66731 | 66742 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85101696 |
| 64. | NW_001092483 | CGC | 4 | 66969 | 66980 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85101696 |
| 65. | NW_001092483 | TTC | 4 | 68370 | 68384 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 66. | NW_001092483 | GCC | 7 | 68535 | 68555 | 21 | 0.00% | 0.00% | 33.33% | 66.67% | 85101700 |
| 67. | NW_001092483 | GCC | 4 | 68616 | 68627 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85101700 |
| 68. | NW_001092483 | GGA | 5 | 70418 | 70432 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85101704 |
| 69. | NW_001092483 | CAC | 5 | 70932 | 70946 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85101704 |
| 70. | NW_001092483 | ATG | 5 | 71478 | 71491 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 71. | NW_001092483 | GTC | 4 | 72835 | 72845 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85101708 |
| 72. | NW_001092483 | CAA | 4 | 73470 | 73481 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85101708 |
| 73. | NW_001092483 | GGT | 11 | 76600 | 76633 | 34 | 0.00% | 33.33% | 66.67% | 0.00% | 85101708 |
| 74. | NW_001092483 | CAC | 4 | 77367 | 77378 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101708 |
| 75. | NW_001092483 | GCC | 4 | 77488 | 77499 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85101708 |
| 76. | NW_001092483 | CCT | 4 | 78339 | 78349 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 77. | NW_001092483 | AGT | 4 | 78618 | 78628 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 78. | NW_001092483 | TCG | 6 | 78716 | 78733 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 79. | NW_001092483 | CAA | 5 | 79590 | 79604 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 80. | NW_001092483 | ACA | 4 | 79999 | 80010 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 81. | NW_001092483 | CTC | 5 | 80476 | 80489 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 82. | NW_001092483 | ATC | 4 | 81697 | 81708 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85101717 |
| 83. | NW_001092483 | TAC | 4 | 82087 | 82098 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85101717 |
| 84. | NW_001092483 | AAG | 4 | 82246 | 82257 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101717 |
| 85. | NW_001092483 | GCT | 6 | 82606 | 82623 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85101717 |
| 86. | NW_001092483 | TGC | 4 | 84115 | 84126 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85101721 |
| 87. | NW_001092483 | CGG | 4 | 86568 | 86578 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 88. | NW_001092483 | ACA | 4 | 90544 | 90555 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 89. | NW_001092483 | CAT | 7 | 90594 | 90614 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 90. | NW_001092483 | CTC | 4 | 90635 | 90646 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 91. | NW_001092483 | GCC | 4 | 90647 | 90658 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 92. | NW_001092483 | AGA | 4 | 90873 | 90887 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 93. | NW_001092483 | AGG | 5 | 91332 | 91346 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 94. | NW_001092483 | CCA | 4 | 91632 | 91643 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 95. | NW_001092483 | GAG | 14 | 93211 | 93252 | 42 | 33.33% | 0.00% | 66.67% | 0.00% | 85101730 |
| 96. | NW_001092483 | TTA | 4 | 94166 | 94176 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 97. | NW_001092483 | TAA | 4 | 94904 | 94914 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 98. | NW_001092483 | GAA | 5 | 96185 | 96199 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85101734 |
| 99. | NW_001092483 | TCT | 7 | 96320 | 96340 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85101734 |
| 100. | NW_001092483 | CAC | 5 | 96379 | 96393 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85101734 |
| 101. | NW_001092483 | CAA | 10 | 96716 | 96745 | 30 | 66.67% | 0.00% | 0.00% | 33.33% | 85101734 |
| 102. | NW_001092483 | TCT | 8 | 97502 | 97526 | 25 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 103. | NW_001092483 | GAA | 5 | 101039 | 101053 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85101739 |
| 104. | NW_001092483 | CCA | 4 | 101313 | 101324 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101739 |
| 105. | NW_001092483 | CTA | 4 | 103860 | 103870 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85101743 |
| 106. | NW_001092483 | CAG | 6 | 104129 | 104146 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85101743 |
| 107. | NW_001092483 | GGA | 4 | 104453 | 104463 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85101743 |
| 108. | NW_001092483 | GAA | 4 | 106747 | 106758 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85101743 |
| 109. | NW_001092483 | TCC | 5 | 108184 | 108198 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85101743 |
| 110. | NW_001092483 | GAG | 4 | 108671 | 108681 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85101743 |
| 111. | NW_001092483 | GCC | 4 | 109110 | 109121 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85101743 |
| 112. | NW_001092483 | CCA | 4 | 109266 | 109278 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85101743 |
| 113. | NW_001092483 | GAA | 5 | 110270 | 110285 | 16 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 114. | NW_001092483 | TGG | 7 | 110467 | 110487 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 115. | NW_001092483 | TCT | 4 | 110647 | 110658 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 116. | NW_001092483 | ATC | 4 | 111178 | 111189 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85101747 |
| 117. | NW_001092483 | GAG | 4 | 111533 | 111544 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101747 |
| 118. | NW_001092483 | GTC | 4 | 111775 | 111786 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85101747 |
| 119. | NW_001092483 | GTT | 12 | 111808 | 111843 | 36 | 0.00% | 66.67% | 33.33% | 0.00% | 85101747 |
| 120. | NW_001092483 | AAT | 4 | 115227 | 115239 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 121. | NW_001092483 | CAG | 5 | 117692 | 117706 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85101761 |
| 122. | NW_001092483 | GGA | 4 | 118255 | 118266 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85101761 |
| 123. | NW_001092483 | CGG | 4 | 118624 | 118635 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85101761 |
| 124. | NW_001092483 | TCT | 4 | 120250 | 120261 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85101765 |
| 125. | NW_001092483 | TCC | 7 | 121153 | 121173 | 21 | 0.00% | 33.33% | 0.00% | 66.67% | 85101765 |
| 126. | NW_001092483 | GAT | 4 | 121868 | 121879 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85101770 |
| 127. | NW_001092483 | ACA | 7 | 122276 | 122296 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85101770 |
| 128. | NW_001092483 | CAG | 4 | 122406 | 122417 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85101770 |
| 129. | NW_001092483 | CAA | 7 | 122409 | 122429 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85101770 |
| 130. | NW_001092483 | AAC | 12 | 122622 | 122657 | 36 | 66.67% | 0.00% | 0.00% | 33.33% | 85101770 |
| 131. | NW_001092483 | CAA | 5 | 122741 | 122755 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85101770 |
| 132. | NW_001092483 | AAC | 5 | 122844 | 122858 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85101770 |
| 133. | NW_001092483 | ACC | 4 | 122994 | 123005 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85101770 |
| 134. | NW_001092483 | CGG | 4 | 130835 | 130846 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 135. | NW_001092483 | TGC | 6 | 132094 | 132111 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85101783 |
| 136. | NW_001092483 | CAC | 15 | 132371 | 132416 | 46 | 33.33% | 0.00% | 0.00% | 66.67% | 85101783 |
| 137. | NW_001092483 | CGC | 5 | 132414 | 132428 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85101783 |
| 138. | NW_001092483 | CAC | 4 | 134538 | 134549 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 139. | NW_001092483 | CAT | 5 | 134544 | 134558 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 140. | NW_001092483 | CGT | 4 | 134867 | 134878 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 141. | NW_001092483 | CTT | 4 | 138254 | 138265 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 142. | NW_001092483 | ACA | 4 | 140490 | 140501 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 143. | NW_001092483 | ACG | 4 | 140517 | 140528 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 144. | NW_001092483 | GGT | 4 | 143559 | 143571 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 145. | NW_001092483 | GTA | 4 | 143797 | 143807 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 146. | NW_001092483 | GCC | 4 | 144696 | 144707 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 147. | NW_001092483 | GCT | 5 | 144864 | 144878 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 148. | NW_001092483 | CTT | 4 | 147995 | 148005 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |