List of
Perfect Penta
-nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006692 | TACAG | 3 | 93833 | 93847 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 2. | NC_006692 | TTATA | 3 | 99297 | 99311 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NC_006692 | GAAAA | 3 | 226714 | 226728 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 58269298 |
| 4. | NC_006692 | ACGCG | 3 | 291218 | 291232 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 5. | NC_006692 | TCGCA | 3 | 739429 | 739443 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 58269726 |
| 6. | NC_006692 | AAAAT | 3 | 828016 | 828030 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 58269666 |
| 7. | NC_006692 | TTCTT | 3 | 831465 | 831479 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 8. | NC_006692 | CGCGT | 3 | 947771 | 947785 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | 58269818 |
| 9. | NC_006692 | AAAAT | 3 | 1143311 | 1143325 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NC_006692 | CTTCA | 3 | 1154934 | 1154948 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 58270006 |
| 11. | NC_006692 | CATAT | 3 | 1159377 | 1159391 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 12. | NC_006692 | GAAAA | 3 | 1167665 | 1167679 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 58270018 |
| 13. | NC_006692 | GTAAA | 3 | 1200353 | 1200367 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | 58269878 |
| 14. | NC_006692 | CATCT | 3 | 1205950 | 1205964 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 58269886 |
| 15. | NC_006692 | AAAAT | 3 | 1325622 | 1325636 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 58269976 |
| 16. | NC_006692 | AGATT | 3 | 1327391 | 1327405 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 58269976 |