List of
Imperfect Penta
-nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006692 | CGAAG | 3 | 13401 | 13415 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | 58269134 |
| 2. | NC_006692 | AAGAG | 3 | 71520 | 71533 | 14 | 60.00% | 0.00% | 40.00% | 0.00% | 58269216 |
| 3. | NC_006692 | TACAG | 3 | 93833 | 93847 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 4. | NC_006692 | TTATA | 3 | 99297 | 99311 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NC_006692 | TCCCC | 3 | 111477 | 111490 | 14 | 0.00% | 20.00% | 0.00% | 80.00% | Non-Coding |
| 6. | NC_006692 | ACTCC | 3 | 131501 | 131515 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 7. | NC_006692 | ACTGG | 3 | 191185 | 191199 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | 58269266 |
| 8. | NC_006692 | GAGAA | 4 | 203092 | 203110 | 19 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 9. | NC_006692 | CTCCT | 3 | 222314 | 222327 | 14 | 0.00% | 40.00% | 0.00% | 60.00% | 58270002 |
| 10. | NC_006692 | GAAAA | 5 | 226704 | 226728 | 25 | 80.00% | 0.00% | 20.00% | 0.00% | 58269298 |
| 11. | NC_006692 | TGCCT | 3 | 228797 | 228812 | 16 | 0.00% | 40.00% | 20.00% | 40.00% | 58269308 |
| 12. | NC_006692 | TCCGC | 3 | 232951 | 232964 | 14 | 0.00% | 20.00% | 20.00% | 60.00% | 58269320 |
| 13. | NC_006692 | GGCAA | 3 | 238725 | 238739 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 14. | NC_006692 | TGTGC | 3 | 243214 | 243228 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | 58269342 |
| 15. | NC_006692 | ATTTT | 3 | 264601 | 264615 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NC_006692 | AACAG | 3 | 289674 | 289688 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | 58269414 |
| 17. | NC_006692 | ACGCG | 3 | 291218 | 291232 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 18. | NC_006692 | GGTAT | 3 | 322374 | 322387 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | 58269256 |
| 19. | NC_006692 | GGGCC | 3 | 382470 | 382484 | 15 | 0.00% | 0.00% | 60.00% | 40.00% | Non-Coding |
| 20. | NC_006692 | GCTTC | 4 | 382505 | 382524 | 20 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 21. | NC_006692 | AGGTA | 3 | 407161 | 407174 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | 58269352 |
| 22. | NC_006692 | CCTTC | 3 | 433807 | 433820 | 14 | 0.00% | 40.00% | 0.00% | 60.00% | 58269384 |
| 23. | NC_006692 | TGGAT | 3 | 434137 | 434151 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 24. | NC_006692 | TTTAC | 3 | 438500 | 438513 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NC_006692 | GAAAA | 3 | 448338 | 448351 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 26. | NC_006692 | TTTTC | 3 | 455024 | 455038 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 27. | NC_006692 | CAAAA | 3 | 518929 | 518942 | 14 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 28. | NC_006692 | ACCCT | 3 | 536820 | 536833 | 14 | 20.00% | 20.00% | 0.00% | 60.00% | 58269450 |
| 29. | NC_006692 | TTTTA | 4 | 548757 | 548775 | 19 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_006692 | TTGCA | 3 | 591471 | 591484 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 31. | NC_006692 | TCTAA | 3 | 606866 | 606880 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 58269532 |
| 32. | NC_006692 | TCATA | 4 | 646047 | 646065 | 19 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 33. | NC_006692 | TCCAG | 3 | 649803 | 649816 | 14 | 20.00% | 20.00% | 20.00% | 40.00% | 58269596 |
| 34. | NC_006692 | CCGCC | 3 | 664352 | 664365 | 14 | 0.00% | 0.00% | 20.00% | 80.00% | 58269602 |
| 35. | NC_006692 | TGCTG | 3 | 716570 | 716584 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | 58269678 |
| 36. | NC_006692 | AGGAT | 3 | 719421 | 719435 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 58269682 |
| 37. | NC_006692 | TCGCA | 3 | 739429 | 739443 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 58269726 |
| 38. | NC_006692 | AAAAT | 3 | 828016 | 828030 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 58269666 |
| 39. | NC_006692 | TTCTT | 3 | 831465 | 831479 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 40. | NC_006692 | ACCCC | 3 | 876920 | 876933 | 14 | 20.00% | 0.00% | 0.00% | 80.00% | 58269736 |
| 41. | NC_006692 | TTTTG | 3 | 888614 | 888627 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 42. | NC_006692 | GAAAA | 4 | 910573 | 910592 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 43. | NC_006692 | CGCGT | 3 | 947771 | 947785 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | 58269818 |
| 44. | NC_006692 | GGGCG | 3 | 1012048 | 1012062 | 15 | 0.00% | 0.00% | 80.00% | 20.00% | 58269820 |
| 45. | NC_006692 | TGGGA | 3 | 1047252 | 1047265 | 14 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 46. | NC_006692 | CCCCA | 3 | 1094898 | 1094913 | 16 | 20.00% | 0.00% | 0.00% | 80.00% | 58269902 |
| 47. | NC_006692 | GGCAG | 3 | 1102029 | 1102042 | 14 | 20.00% | 0.00% | 60.00% | 20.00% | 58269906 |
| 48. | NC_006692 | CCTCT | 3 | 1128323 | 1128338 | 16 | 0.00% | 40.00% | 0.00% | 60.00% | 58269940 |
| 49. | NC_006692 | AAAAT | 3 | 1143311 | 1143325 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NC_006692 | CTTCA | 4 | 1154934 | 1154954 | 21 | 20.00% | 40.00% | 0.00% | 40.00% | 58270006 |
| 51. | NC_006692 | CATAT | 3 | 1159377 | 1159391 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 52. | NC_006692 | GAAAA | 3 | 1167665 | 1167679 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 58270018 |
| 53. | NC_006692 | GGACA | 3 | 1170184 | 1170198 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 54. | NC_006692 | CTTTT | 3 | 1180213 | 1180226 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | 58270030 |
| 55. | NC_006692 | GGAAT | 3 | 1187485 | 1187499 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 56. | NC_006692 | GTAAA | 3 | 1200353 | 1200367 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | 58269878 |
| 57. | NC_006692 | CATCT | 3 | 1205950 | 1205964 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 58269886 |
| 58. | NC_006692 | TCCAT | 3 | 1246428 | 1246443 | 16 | 20.00% | 40.00% | 0.00% | 40.00% | 58269926 |
| 59. | NC_006692 | AAAAG | 3 | 1259487 | 1259500 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 60. | NC_006692 | CCCAA | 3 | 1263525 | 1263538 | 14 | 40.00% | 0.00% | 0.00% | 60.00% | 58269938 |
| 61. | NC_006692 | TGTAC | 3 | 1302070 | 1302084 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 62. | NC_006692 | CCCGC | 4 | 1312582 | 1312601 | 20 | 0.00% | 0.00% | 20.00% | 80.00% | 58269968 |
| 63. | NC_006692 | GGTTT | 3 | 1316626 | 1316639 | 14 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 64. | NC_006692 | AGATT | 3 | 1327391 | 1327405 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 58269976 |