List of
Perfect Tri
-nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006679 | TAT | 4 | 16622 | 16633 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_006679 | CTT | 5 | 46906 | 46920 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 58259729 |
| 3. | NC_006679 | AAG | 4 | 64528 | 64539 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 4. | NC_006679 | GTA | 4 | 64752 | 64763 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NC_006679 | TTC | 4 | 88339 | 88350 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 6. | NC_006679 | TCC | 4 | 104523 | 104534 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58259767 |
| 7. | NC_006679 | TCA | 4 | 105393 | 105404 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 58259767 |
| 8. | NC_006679 | TCG | 4 | 105405 | 105416 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58259767 |
| 9. | NC_006679 | TCT | 4 | 109116 | 109127 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 10. | NC_006679 | ATA | 4 | 111820 | 111831 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_006679 | GAG | 4 | 116016 | 116027 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 12. | NC_006679 | CCA | 7 | 116622 | 116642 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 13. | NC_006679 | TTC | 4 | 132348 | 132359 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 14. | NC_006679 | TTA | 4 | 148644 | 148655 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 15. | NC_006679 | ACA | 4 | 188700 | 188711 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 16. | NC_006679 | GAA | 4 | 191696 | 191707 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58260076 |
| 17. | NC_006679 | GCT | 4 | 198178 | 198189 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58260080 |
| 18. | NC_006679 | GAG | 5 | 217727 | 217741 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 58260090 |
| 19. | NC_006679 | TCC | 4 | 237774 | 237785 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 20. | NC_006679 | GCC | 4 | 241102 | 241113 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 58260106 |
| 21. | NC_006679 | GCT | 5 | 242659 | 242673 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 58260106 |
| 22. | NC_006679 | GTT | 5 | 242674 | 242688 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 58260106 |
| 23. | NC_006679 | AAG | 4 | 251909 | 251920 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58260112 |
| 24. | NC_006679 | GAG | 4 | 254712 | 254723 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58260116 |
| 25. | NC_006679 | CAA | 4 | 274391 | 274402 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 58260130 |
| 26. | NC_006679 | TCT | 4 | 283077 | 283088 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 27. | NC_006679 | TGG | 4 | 296038 | 296049 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 58260144 |
| 28. | NC_006679 | CAA | 5 | 297075 | 297089 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 58260146 |
| 29. | NC_006679 | CAG | 7 | 297258 | 297278 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 58260146 |
| 30. | NC_006679 | CAT | 5 | 298168 | 298182 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 58260146 |
| 31. | NC_006679 | CAC | 5 | 299391 | 299405 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 58260148 |
| 32. | NC_006679 | GAG | 4 | 300769 | 300780 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58260148 |
| 33. | NC_006679 | AAG | 5 | 304299 | 304313 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 58260152 |
| 34. | NC_006679 | GAC | 4 | 322526 | 322537 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58260164 |
| 35. | NC_006679 | TGG | 4 | 337815 | 337826 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 36. | NC_006679 | ACG | 4 | 354698 | 354709 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58260188 |
| 37. | NC_006679 | GCT | 6 | 426533 | 426550 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 38. | NC_006679 | TCT | 6 | 426553 | 426570 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 39. | NC_006679 | CAT | 4 | 445366 | 445377 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 40. | NC_006679 | ATG | 5 | 526614 | 526628 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NC_006679 | AGC | 4 | 526829 | 526840 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58260046 |
| 42. | NC_006679 | CCG | 5 | 559943 | 559957 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 58260050 |
| 43. | NC_006679 | TCC | 4 | 583727 | 583738 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58259928 |
| 44. | NC_006679 | TGC | 4 | 588863 | 588874 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 45. | NC_006679 | CGA | 4 | 595562 | 595573 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 46. | NC_006679 | GAT | 6 | 625505 | 625522 | 18 | 33.33% | 33.33% | 33.33% | 0.00% | 58259948 |
| 47. | NC_006679 | CAG | 4 | 627696 | 627707 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 48. | NC_006679 | CAG | 4 | 657632 | 657643 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NC_006679 | CAC | 4 | 660553 | 660564 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 58260224 |
| 50. | NC_006679 | CAG | 4 | 671592 | 671603 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58260230 |
| 51. | NC_006679 | TAG | 4 | 672876 | 672887 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 52. | NC_006679 | GAA | 4 | 676861 | 676872 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NC_006679 | ACA | 4 | 685065 | 685076 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 54. | NC_006679 | GAG | 4 | 696355 | 696366 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58260240 |
| 55. | NC_006679 | TCT | 4 | 696563 | 696574 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58260240 |
| 56. | NC_006679 | CGG | 4 | 699187 | 699198 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 58260054 |
| 57. | NC_006679 | CCA | 4 | 702848 | 702859 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 58260244 |
| 58. | NC_006679 | CCA | 4 | 702863 | 702874 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 58260244 |
| 59. | NC_006679 | CCG | 5 | 702875 | 702889 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 58260244 |
| 60. | NC_006679 | GCT | 4 | 719410 | 719421 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58260256 |
| 61. | NC_006679 | AAG | 4 | 719662 | 719673 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58260256 |
| 62. | NC_006679 | TCT | 4 | 734815 | 734826 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 63. | NC_006679 | TAG | 4 | 752402 | 752413 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 64. | NC_006679 | GCT | 4 | 783512 | 783523 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 65. | NC_006679 | CGA | 4 | 843271 | 843282 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 66. | NC_006679 | TCG | 4 | 849126 | 849137 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 67. | NC_006679 | GAT | 4 | 883347 | 883358 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 58260312 |
| 68. | NC_006679 | ACA | 11 | 885197 | 885229 | 33 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 69. | NC_006679 | GAT | 4 | 889199 | 889210 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 58260318 |
| 70. | NC_006679 | GAG | 4 | 896797 | 896808 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58260322 |
| 71. | NC_006679 | AGA | 4 | 918469 | 918480 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58260328 |
| 72. | NC_006679 | GAG | 4 | 919306 | 919317 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58260328 |
| 73. | NC_006679 | TGT | 5 | 921312 | 921326 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 58260330 |
| 74. | NC_006679 | GTG | 5 | 928132 | 928146 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 58260334 |
| 75. | NC_006679 | GAA | 4 | 935010 | 935021 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58260338 |
| 76. | NC_006679 | TCC | 4 | 947042 | 947053 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 77. | NC_006679 | CTT | 4 | 978917 | 978928 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 78. | NC_006679 | TTC | 4 | 981319 | 981330 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 79. | NC_006679 | CTG | 6 | 1061867 | 1061884 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 58260014 |
| 80. | NC_006679 | GAA | 5 | 1062157 | 1062171 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 58260014 |
| 81. | NC_006679 | AGA | 8 | 1073937 | 1073960 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | 58260020 |