List of
Imperfect Tri
-nucleotide repeats in Encephalitozoon cuniculi GB-M1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_003237 | AGG | 4 | 434 | 445 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 2. | NC_003237 | GCA | 4 | 2028 | 2038 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 3. | NC_003237 | TAC | 4 | 2849 | 2859 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 4. | NC_003237 | GAT | 4 | 2935 | 2946 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NC_003237 | CAC | 4 | 4670 | 4680 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 6. | NC_003237 | CTC | 4 | 5383 | 5394 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074803 |
| 7. | NC_003237 | CAA | 4 | 5673 | 5684 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19074803 |
| 8. | NC_003237 | CTC | 4 | 5779 | 5791 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 19074803 |
| 9. | NC_003237 | CAC | 4 | 6611 | 6621 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 10. | NC_003237 | GAT | 4 | 7551 | 7562 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074804 |
| 11. | NC_003237 | CTT | 7 | 8965 | 8985 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 19074805 |
| 12. | NC_003237 | CTT | 7 | 8998 | 9018 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 19074805 |
| 13. | NC_003237 | CTC | 4 | 9031 | 9042 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074805 |
| 14. | NC_003237 | CTT | 4 | 9040 | 9051 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074805 |
| 15. | NC_003237 | CTC | 4 | 9049 | 9060 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074805 |
| 16. | NC_003237 | CTT | 4 | 9058 | 9069 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074805 |
| 17. | NC_003237 | CTC | 4 | 9067 | 9078 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074805 |
| 18. | NC_003237 | TCC | 4 | 10599 | 10611 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 19. | NC_003237 | CTC | 4 | 10840 | 10850 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 20. | NC_003237 | TCT | 5 | 11179 | 11192 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 21. | NC_003237 | ACT | 4 | 12394 | 12404 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 19074807 |
| 22. | NC_003237 | ATG | 4 | 12623 | 12634 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074807 |
| 23. | NC_003237 | AAT | 4 | 12849 | 12860 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 24. | NC_003237 | ACA | 4 | 14810 | 14820 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 19074809 |
| 25. | NC_003237 | CTG | 4 | 15746 | 15756 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 26. | NC_003237 | CAG | 4 | 18555 | 18566 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19074813 |
| 27. | NC_003237 | TCC | 4 | 19075 | 19086 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074813 |
| 28. | NC_003237 | CTT | 4 | 26736 | 26747 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074820 |
| 29. | NC_003237 | CTC | 5 | 28413 | 28428 | 16 | 0.00% | 33.33% | 0.00% | 66.67% | 19074822 |
| 30. | NC_003237 | GAA | 4 | 30024 | 30036 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 19074824 |
| 31. | NC_003237 | AGG | 4 | 30839 | 30849 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19074824 |
| 32. | NC_003237 | TCT | 4 | 32430 | 32441 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074824 |
| 33. | NC_003237 | TCC | 4 | 33861 | 33871 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 19074825 |
| 34. | NC_003237 | ATT | 4 | 34361 | 34372 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 19074825 |
| 35. | NC_003237 | AGG | 4 | 35060 | 35072 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 36. | NC_003237 | GTT | 4 | 41483 | 41493 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 19074829 |
| 37. | NC_003237 | GTT | 4 | 50849 | 50860 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074837 |
| 38. | NC_003237 | TCA | 4 | 52515 | 52526 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19074837 |
| 39. | NC_003237 | GTT | 4 | 61632 | 61643 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074845 |
| 40. | NC_003237 | TCT | 4 | 64772 | 64782 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 19074845 |
| 41. | NC_003237 | CGA | 4 | 69789 | 69803 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 19074848 |
| 42. | NC_003237 | AGG | 4 | 72427 | 72438 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074850 |
| 43. | NC_003237 | AGG | 4 | 72492 | 72504 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 19074850 |
| 44. | NC_003237 | ACA | 4 | 78692 | 78703 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19074855 |
| 45. | NC_003237 | GCT | 4 | 79298 | 79309 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19074856 |
| 46. | NC_003237 | AGT | 4 | 79968 | 79979 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074857 |
| 47. | NC_003237 | ACC | 5 | 80241 | 80254 | 14 | 33.33% | 0.00% | 0.00% | 66.67% | 19074857 |
| 48. | NC_003237 | GAA | 4 | 83598 | 83609 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19074861 |
| 49. | NC_003237 | TCC | 4 | 84637 | 84648 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074861 |
| 50. | NC_003237 | AGA | 4 | 88342 | 88352 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19074863 |
| 51. | NC_003237 | TTG | 4 | 88492 | 88503 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074863 |
| 52. | NC_003237 | AGG | 4 | 88627 | 88638 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074863 |
| 53. | NC_003237 | CTC | 4 | 89357 | 89368 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074864 |
| 54. | NC_003237 | CAG | 4 | 91134 | 91146 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 19074866 |
| 55. | NC_003237 | GCA | 4 | 93028 | 93038 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 19074867 |
| 56. | NC_003237 | CTG | 4 | 96757 | 96768 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19074871 |
| 57. | NC_003237 | TCT | 4 | 97504 | 97515 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074873 |
| 58. | NC_003237 | AGA | 5 | 99798 | 99811 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | 19074876 |
| 59. | NC_003237 | AGG | 4 | 99858 | 99869 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074876 |
| 60. | NC_003237 | CAA | 4 | 103542 | 103553 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19074879 |
| 61. | NC_003237 | TGT | 4 | 104298 | 104309 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074879 |
| 62. | NC_003237 | AGA | 4 | 105301 | 105313 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 19074880 |
| 63. | NC_003237 | TGA | 4 | 107999 | 108010 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074882 |
| 64. | NC_003237 | TCC | 4 | 108333 | 108344 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074882 |
| 65. | NC_003237 | GTT | 4 | 110482 | 110493 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074884 |
| 66. | NC_003237 | TCT | 4 | 114261 | 114271 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 19074887 |
| 67. | NC_003237 | TCG | 4 | 114574 | 114584 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 19074887 |
| 68. | NC_003237 | CTC | 4 | 115041 | 115052 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074887 |
| 69. | NC_003237 | CGA | 4 | 116696 | 116710 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 19074888 |
| 70. | NC_003237 | CGA | 4 | 119386 | 119396 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 19074890 |
| 71. | NC_003237 | AGG | 4 | 123410 | 123420 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19074893 |
| 72. | NC_003237 | AGG | 4 | 123730 | 123741 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074893 |
| 73. | NC_003237 | CGA | 4 | 127152 | 127162 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 19074897 |
| 74. | NC_003237 | GAG | 4 | 128594 | 128606 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 19074900 |
| 75. | NC_003237 | CTT | 4 | 132704 | 132715 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074905 |
| 76. | NC_003237 | CTG | 4 | 133872 | 133883 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19074906 |
| 77. | NC_003237 | GTA | 4 | 136405 | 136415 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 19074908 |
| 78. | NC_003237 | AGC | 4 | 139551 | 139562 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19074910 |
| 79. | NC_003237 | GAA | 5 | 139709 | 139723 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 19074910 |
| 80. | NC_003237 | ACA | 4 | 141536 | 141547 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19074911 |
| 81. | NC_003237 | AGA | 4 | 142945 | 142956 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19074912 |
| 82. | NC_003237 | CTC | 4 | 143689 | 143700 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074913 |
| 83. | NC_003237 | CTT | 4 | 146972 | 146983 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074916 |
| 84. | NC_003237 | CTC | 4 | 147760 | 147772 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 19074917 |
| 85. | NC_003237 | AGG | 4 | 156447 | 156458 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074923 |
| 86. | NC_003237 | AGA | 4 | 157234 | 157244 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19074924 |
| 87. | NC_003237 | GAC | 4 | 157574 | 157585 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19074924 |
| 88. | NC_003237 | GAG | 5 | 157841 | 157855 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 19074924 |
| 89. | NC_003237 | GAG | 4 | 158233 | 158244 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074925 |
| 90. | NC_003237 | GTT | 4 | 158511 | 158521 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 91. | NC_003237 | TTC | 4 | 159660 | 159670 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 19074926 |
| 92. | NC_003237 | AGA | 5 | 159991 | 160006 | 16 | 66.67% | 0.00% | 33.33% | 0.00% | 19074926 |
| 93. | NC_003237 | TCA | 4 | 160141 | 160151 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 19074926 |
| 94. | NC_003237 | CGT | 4 | 160839 | 160850 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19074927 |
| 95. | NC_003237 | TTC | 5 | 163135 | 163148 | 14 | 0.00% | 66.67% | 0.00% | 33.33% | 19074928 |
| 96. | NC_003237 | AGA | 4 | 171740 | 171750 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 97. | NC_003237 | CTT | 4 | 171803 | 171814 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074936 |
| 98. | NC_003237 | TCC | 4 | 176690 | 176701 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074938 |
| 99. | NC_003237 | TCA | 4 | 177218 | 177228 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 19074938 |
| 100. | NC_003237 | CTC | 4 | 177795 | 177806 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074939 |
| 101. | NC_003237 | CTT | 4 | 179055 | 179065 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 19074941 |
| 102. | NC_003237 | AGA | 4 | 180076 | 180086 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19074942 |
| 103. | NC_003237 | GTC | 4 | 180102 | 180113 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19074942 |
| 104. | NC_003237 | TGT | 4 | 181757 | 181768 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074942 |
| 105. | NC_003237 | ATC | 4 | 183093 | 183104 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 106. | NC_003237 | CCT | 4 | 184967 | 184978 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074944 |
| 107. | NC_003237 | CTT | 4 | 185687 | 185699 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | 19074944 |
| 108. | NC_003237 | GTG | 4 | 186798 | 186809 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 19074944 |
| 109. | NC_003237 | GCG | 4 | 187994 | 188006 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 110. | NC_003237 | TTG | 4 | 188484 | 188495 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19074946 |
| 111. | NC_003237 | CTT | 4 | 190997 | 191007 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 19074947 |
| 112. | NC_003237 | AGG | 5 | 198842 | 198856 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 19074956 |
| 113. | NC_003237 | ATT | 4 | 199541 | 199552 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 19074956 |
| 114. | NC_003237 | TCA | 4 | 203199 | 203210 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19074959 |
| 115. | NC_003237 | TCC | 4 | 204286 | 204298 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 19074960 |
| 116. | NC_003237 | GAG | 6 | 207449 | 207466 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 19074964 |
| 117. | NC_003237 | AGA | 4 | 207711 | 207721 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19074964 |
| 118. | NC_003237 | CTC | 4 | 210619 | 210630 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074969 |
| 119. | NC_003237 | TGA | 4 | 211923 | 211934 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074970 |
| 120. | NC_003237 | CCT | 4 | 211950 | 211960 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 19074970 |
| 121. | NC_003237 | AGA | 4 | 213340 | 213351 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 122. | NC_003237 | CAG | 4 | 217791 | 217802 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19074974 |
| 123. | NC_003237 | CTG | 4 | 219294 | 219304 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 19074975 |
| 124. | NC_003237 | GAG | 5 | 220332 | 220347 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 125. | NC_003237 | GAG | 5 | 220368 | 220383 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 126. | NC_003237 | GAT | 4 | 224628 | 224639 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19074978 |
| 127. | NC_003237 | AAG | 4 | 224796 | 224807 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19074978 |
| 128. | NC_003237 | CAA | 4 | 225056 | 225066 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 19074978 |
| 129. | NC_003237 | CTT | 4 | 225471 | 225482 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19074979 |
| 130. | NC_003237 | GAG | 4 | 229776 | 229787 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074982 |
| 131. | NC_003237 | AGA | 4 | 233964 | 233974 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 132. | NC_003237 | AGG | 5 | 234613 | 234626 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 19074987 |
| 133. | NC_003237 | AAG | 4 | 235142 | 235152 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19074987 |
| 134. | NC_003237 | AGG | 4 | 241077 | 241088 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19074991 |
| 135. | NC_003237 | ACT | 4 | 241258 | 241268 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 19074991 |
| 136. | NC_003237 | CTC | 4 | 245859 | 245870 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19074995 |
| 137. | NC_003237 | GAA | 5 | 252809 | 252824 | 16 | 66.67% | 0.00% | 33.33% | 0.00% | 19075000 |
| 138. | NC_003237 | GCT | 4 | 259811 | 259822 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 139. | NC_003237 | GGC | 4 | 260680 | 260690 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 19075005 |
| 140. | NC_003237 | TTC | 4 | 261263 | 261274 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19075006 |
| 141. | NC_003237 | CTT | 4 | 262547 | 262557 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 142. | NC_003237 | TGA | 4 | 263186 | 263197 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19075009 |
| 143. | NC_003237 | AGG | 4 | 263447 | 263457 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19075009 |
| 144. | NC_003237 | AGA | 4 | 263770 | 263780 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19075009 |
| 145. | NC_003237 | AAG | 4 | 264289 | 264299 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19075009 |
| 146. | NC_003237 | AAG | 4 | 264931 | 264942 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19075009 |
| 147. | NC_003237 | AGA | 4 | 266472 | 266482 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 148. | NC_003237 | GAA | 4 | 266552 | 266563 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |