List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092725 | TGT | 4 | 82 | 92 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092725 | TTC | 4 | 1084 | 1095 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092725 | GTT | 24 | 1224 | 1295 | 72 | 0.00% | 66.67% | 33.33% | 0.00% | 85113040 |
| 4. | NW_001092725 | GAG | 5 | 1296 | 1310 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85113040 |
| 5. | NW_001092725 | GCG | 4 | 1545 | 1555 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85113040 |
| 6. | NW_001092725 | GTC | 4 | 3596 | 3607 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85113040 |
| 7. | NW_001092725 | TTC | 8 | 3602 | 3625 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | 85113040 |
| 8. | NW_001092725 | TCC | 4 | 3668 | 3679 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113040 |
| 9. | NW_001092725 | TGC | 4 | 5083 | 5094 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85113040 |
| 10. | NW_001092725 | CCG | 4 | 5201 | 5211 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85113040 |
| 11. | NW_001092725 | CCG | 4 | 5612 | 5623 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85113040 |
| 12. | NW_001092725 | GCC | 4 | 6121 | 6131 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85113040 |
| 13. | NW_001092725 | GTA | 4 | 7214 | 7225 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092725 | ACT | 4 | 8029 | 8040 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092725 | CCA | 4 | 8239 | 8249 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 16. | NW_001092725 | GTC | 5 | 8707 | 8721 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 17. | NW_001092725 | TTC | 7 | 8713 | 8733 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092725 | CAC | 4 | 10187 | 10197 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85113045 |
| 19. | NW_001092725 | TCC | 4 | 10270 | 10282 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 85113045 |
| 20. | NW_001092725 | CGG | 6 | 10294 | 10311 | 18 | 0.00% | 0.00% | 66.67% | 33.33% | 85113045 |
| 21. | NW_001092725 | GCG | 4 | 10362 | 10373 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85113045 |
| 22. | NW_001092725 | GAC | 4 | 10535 | 10546 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113045 |
| 23. | NW_001092725 | AAC | 4 | 10805 | 10816 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85113045 |
| 24. | NW_001092725 | AGG | 4 | 10933 | 10944 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85113045 |
| 25. | NW_001092725 | GTA | 4 | 10996 | 11007 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092725 | TGT | 4 | 12063 | 12074 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85113050 |
| 27. | NW_001092725 | AGG | 4 | 13795 | 13805 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 28. | NW_001092725 | TTA | 4 | 14363 | 14374 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092725 | TCT | 4 | 15828 | 15839 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 30. | NW_001092725 | ACC | 13 | 15877 | 15915 | 39 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 31. | NW_001092725 | AGT | 4 | 18220 | 18233 | 14 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092725 | ACC | 4 | 18744 | 18755 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 33. | NW_001092725 | AGC | 11 | 18750 | 18782 | 33 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001092725 | TGG | 4 | 19183 | 19193 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 35. | NW_001092725 | CTC | 4 | 20251 | 20262 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113054 |
| 36. | NW_001092725 | GTT | 11 | 20332 | 20365 | 34 | 0.00% | 66.67% | 33.33% | 0.00% | 85113054 |
| 37. | NW_001092725 | GGC | 4 | 20530 | 20541 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85113054 |
| 38. | NW_001092725 | CAT | 9 | 21838 | 21864 | 27 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092725 | CAT | 5 | 23139 | 23153 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85113057 |
| 40. | NW_001092725 | CTG | 4 | 24676 | 24687 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 41. | NW_001092725 | TGA | 17 | 24940 | 24989 | 50 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092725 | CTG | 11 | 24993 | 25025 | 33 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 43. | NW_001092725 | TCA | 4 | 25045 | 25056 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092725 | TGA | 4 | 25310 | 25321 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 45. | NW_001092725 | CGT | 4 | 25626 | 25637 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 46. | NW_001092725 | GAA | 4 | 27899 | 27909 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85113061 |
| 47. | NW_001092725 | CTT | 4 | 28461 | 28472 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85113061 |
| 48. | NW_001092725 | AGA | 6 | 30507 | 30524 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 49. | NW_001092725 | GTG | 7 | 30587 | 30607 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 50. | NW_001092725 | TGA | 9 | 30606 | 30632 | 27 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092725 | GAG | 4 | 30646 | 30656 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 52. | NW_001092725 | AGA | 5 | 30723 | 30737 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 53. | NW_001092725 | GGA | 4 | 31204 | 31215 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 54. | NW_001092725 | ACC | 4 | 31761 | 31772 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 55. | NW_001092725 | TCC | 4 | 32061 | 32071 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85113065 |
| 56. | NW_001092725 | CTT | 4 | 32334 | 32345 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85113065 |
| 57. | NW_001092725 | CCA | 4 | 32385 | 32397 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85113065 |
| 58. | NW_001092725 | GAG | 4 | 32672 | 32683 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85113065 |
| 59. | NW_001092725 | CCT | 4 | 33011 | 33022 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 60. | NW_001092725 | CAC | 4 | 33634 | 33645 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85113069 |
| 61. | NW_001092725 | CCT | 4 | 33772 | 33783 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113069 |
| 62. | NW_001092725 | AGA | 4 | 34166 | 34176 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85113069 |
| 63. | NW_001092725 | GCA | 4 | 34534 | 34545 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113069 |
| 64. | NW_001092725 | GTT | 4 | 34929 | 34940 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 65. | NW_001092725 | CCA | 4 | 35400 | 35411 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 66. | NW_001092725 | TCC | 4 | 37947 | 37958 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113073 |
| 67. | NW_001092725 | TCT | 4 | 37953 | 37964 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85113073 |
| 68. | NW_001092725 | GCG | 4 | 38387 | 38398 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85113073 |
| 69. | NW_001092725 | CTT | 4 | 38404 | 38415 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85113073 |
| 70. | NW_001092725 | GCT | 9 | 39385 | 39411 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | 85113079 |
| 71. | NW_001092725 | CTC | 4 | 40332 | 40343 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113082 |
| 72. | NW_001092725 | TCT | 10 | 40483 | 40513 | 31 | 0.00% | 66.67% | 0.00% | 33.33% | 85113082 |
| 73. | NW_001092725 | CTA | 4 | 40512 | 40522 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85113082 |
| 74. | NW_001092725 | AGA | 4 | 40527 | 40538 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85113082 |
| 75. | NW_001092725 | GAG | 12 | 40783 | 40818 | 36 | 33.33% | 0.00% | 66.67% | 0.00% | 85113082 |
| 76. | NW_001092725 | CAT | 4 | 40872 | 40883 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 77. | NW_001092725 | GTG | 5 | 40989 | 41003 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 78. | NW_001092725 | GTG | 4 | 42696 | 42706 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 79. | NW_001092725 | TGA | 10 | 43142 | 43171 | 30 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 80. | NW_001092725 | AGC | 4 | 46398 | 46409 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113091 |
| 81. | NW_001092725 | AAC | 7 | 46671 | 46692 | 22 | 66.67% | 0.00% | 0.00% | 33.33% | 85113091 |
| 82. | NW_001092725 | GCT | 4 | 48508 | 48519 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85113096 |
| 83. | NW_001092725 | GGT | 5 | 48842 | 48856 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85113096 |
| 84. | NW_001092725 | TGG | 4 | 48877 | 48888 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85113096 |
| 85. | NW_001092725 | GGT | 4 | 48896 | 48906 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85113096 |
| 86. | NW_001092725 | CTC | 4 | 49570 | 49581 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85113096 |
| 87. | NW_001092725 | GTC | 4 | 50244 | 50255 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 88. | NW_001092725 | CAA | 4 | 50315 | 50326 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 89. | NW_001092725 | TGG | 4 | 51066 | 51076 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 90. | NW_001092725 | CGA | 4 | 52497 | 52508 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113100 |
| 91. | NW_001092725 | AGG | 4 | 52532 | 52543 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85113100 |
| 92. | NW_001092725 | ACG | 7 | 52832 | 52852 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85113100 |
| 93. | NW_001092725 | GAC | 4 | 53038 | 53049 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113100 |
| 94. | NW_001092725 | CGA | 4 | 53281 | 53292 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113100 |
| 95. | NW_001092725 | CTC | 4 | 53293 | 53307 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85113100 |
| 96. | NW_001092725 | GCC | 4 | 53588 | 53599 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85113100 |
| 97. | NW_001092725 | CGC | 5 | 53692 | 53706 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85113100 |
| 98. | NW_001092725 | GAT | 4 | 54136 | 54147 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 99. | NW_001092725 | GAT | 4 | 55929 | 55940 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85113104 |
| 100. | NW_001092725 | GAG | 4 | 56103 | 56113 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85113104 |
| 101. | NW_001092725 | AGA | 4 | 60451 | 60461 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 102. | NW_001092725 | CCA | 4 | 60955 | 60967 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 103. | NW_001092725 | GAG | 4 | 61652 | 61663 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85113108 |
| 104. | NW_001092725 | CAG | 9 | 62620 | 62647 | 28 | 33.33% | 0.00% | 33.33% | 33.33% | 85113108 |
| 105. | NW_001092725 | CGC | 5 | 62961 | 62974 | 14 | 0.00% | 0.00% | 33.33% | 66.67% | 85113108 |
| 106. | NW_001092725 | CCG | 5 | 64520 | 64535 | 16 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 107. | NW_001092725 | AGA | 4 | 64566 | 64577 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 108. | NW_001092725 | CTA | 4 | 64924 | 64934 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 109. | NW_001092725 | ACT | 8 | 64989 | 65011 | 23 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 110. | NW_001092725 | CCG | 4 | 65016 | 65028 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 111. | NW_001092725 | AAG | 8 | 65276 | 65299 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 112. | NW_001092725 | AGA | 6 | 65303 | 65319 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 113. | NW_001092725 | CTG | 4 | 65482 | 65494 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 114. | NW_001092725 | TGC | 12 | 65498 | 65533 | 36 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 115. | NW_001092725 | ACA | 4 | 65704 | 65714 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 116. | NW_001092725 | CCT | 5 | 65757 | 65771 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85113113 |
| 117. | NW_001092725 | ACA | 5 | 66957 | 66971 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 118. | NW_001092725 | AAC | 4 | 67056 | 67067 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 119. | NW_001092725 | TCA | 4 | 67251 | 67262 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85113117 |
| 120. | NW_001092725 | GCT | 4 | 67363 | 67374 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85113117 |
| 121. | NW_001092725 | ACG | 4 | 67416 | 67427 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113117 |
| 122. | NW_001092725 | GTG | 4 | 68968 | 68978 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 123. | NW_001092725 | GTG | 4 | 69765 | 69775 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 124. | NW_001092725 | CAC | 8 | 70481 | 70504 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 125. | NW_001092725 | CGA | 4 | 70855 | 70866 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85113121 |
| 126. | NW_001092725 | GAG | 4 | 71254 | 71264 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85113121 |
| 127. | NW_001092725 | ACT | 4 | 72191 | 72201 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85113121 |
| 128. | NW_001092725 | TGT | 5 | 73249 | 73263 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85113121 |
| 129. | NW_001092725 | CTT | 4 | 73599 | 73610 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 130. | NW_001092725 | TAG | 4 | 73978 | 73988 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 131. | NW_001092725 | AGC | 10 | 74223 | 74252 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 132. | NW_001092725 | TTG | 4 | 77527 | 77538 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85113126 |
| 133. | NW_001092725 | GAT | 4 | 77970 | 77980 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85113126 |
| 134. | NW_001092725 | CTG | 11 | 79600 | 79632 | 33 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 135. | NW_001092725 | GCT | 4 | 79670 | 79681 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 136. | NW_001092725 | GTG | 8 | 79700 | 79724 | 25 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 137. | NW_001092725 | GAG | 9 | 79982 | 80008 | 27 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 138. | NW_001092725 | TGT | 12 | 80470 | 80506 | 37 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 139. | NW_001092725 | ACA | 4 | 83965 | 83976 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 140. | NW_001092725 | CAC | 4 | 84990 | 85002 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 141. | NW_001092725 | CAA | 5 | 86829 | 86843 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85113130 |
| 142. | NW_001092725 | ATC | 4 | 88440 | 88450 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 143. | NW_001092725 | GGT | 6 | 89009 | 89026 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85113135 |
| 144. | NW_001092725 | GCG | 4 | 90025 | 90035 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85113142 |
| 145. | NW_001092725 | CCA | 5 | 90201 | 90215 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85113142 |
| 146. | NW_001092725 | CCA | 4 | 90252 | 90263 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85113142 |
| 147. | NW_001092725 | CCA | 9 | 90309 | 90335 | 27 | 33.33% | 0.00% | 0.00% | 66.67% | 85113142 |
| 148. | NW_001092725 | CAT | 5 | 91362 | 91376 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 149. | NW_001092725 | GCG | 4 | 91676 | 91688 | 13 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 150. | NW_001092725 | GTT | 4 | 92067 | 92078 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |