List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092711 | AGA | 32 | 451 | 546 | 96 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092711 | AGA | 4 | 6218 | 6229 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092711 | TCC | 5 | 6569 | 6584 | 16 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 4. | NW_001092711 | TCA | 4 | 7167 | 7178 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85111883 |
| 5. | NW_001092711 | CGC | 5 | 7741 | 7755 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85111883 |
| 6. | NW_001092711 | TGC | 4 | 7875 | 7886 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111883 |
| 7. | NW_001092711 | ATC | 4 | 7988 | 8000 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | 85111883 |
| 8. | NW_001092711 | AGC | 4 | 12974 | 12985 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 9. | NW_001092711 | CAG | 4 | 13050 | 13060 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 10. | NW_001092711 | CAC | 4 | 14944 | 14955 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85111885 |
| 11. | NW_001092711 | GAA | 4 | 15298 | 15309 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111885 |
| 12. | NW_001092711 | GAA | 4 | 17105 | 17116 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092711 | GAA | 14 | 17105 | 17146 | 42 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 14. | NW_001092711 | TCC | 4 | 17538 | 17548 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 15. | NW_001092711 | AGT | 4 | 18309 | 18319 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 16. | NW_001092711 | TGG | 4 | 22555 | 22566 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 17. | NW_001092711 | CAT | 4 | 23210 | 23220 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092711 | AAC | 4 | 25545 | 25555 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85111891 |
| 19. | NW_001092711 | GTG | 4 | 25912 | 25924 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85111891 |
| 20. | NW_001092711 | TGA | 11 | 26142 | 26175 | 34 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 21. | NW_001092711 | GCC | 4 | 30020 | 30031 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111893 |
| 22. | NW_001092711 | GCA | 5 | 34025 | 34038 | 14 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 23. | NW_001092711 | GAC | 4 | 34107 | 34118 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 24. | NW_001092711 | CAC | 7 | 34930 | 34950 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 25. | NW_001092711 | AGG | 4 | 35433 | 35444 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 26. | NW_001092711 | CCT | 5 | 37839 | 37853 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85111895 |
| 27. | NW_001092711 | GGA | 5 | 37874 | 37887 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 85111895 |
| 28. | NW_001092711 | CGG | 5 | 38100 | 38113 | 14 | 0.00% | 0.00% | 66.67% | 33.33% | 85111895 |
| 29. | NW_001092711 | GTG | 11 | 39625 | 39656 | 32 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001092711 | CTT | 4 | 40411 | 40422 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092711 | ATC | 4 | 44297 | 44307 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85111899 |
| 32. | NW_001092711 | CGG | 4 | 45336 | 45347 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111899 |
| 33. | NW_001092711 | GCG | 4 | 45757 | 45768 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85111899 |
| 34. | NW_001092711 | GCC | 4 | 47388 | 47399 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85111901 |
| 35. | NW_001092711 | TCC | 4 | 48887 | 48898 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111903 |
| 36. | NW_001092711 | TCC | 4 | 48984 | 48995 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85111903 |
| 37. | NW_001092711 | GCT | 6 | 49669 | 49686 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85111903 |
| 38. | NW_001092711 | TGC | 5 | 50321 | 50335 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85111903 |
| 39. | NW_001092711 | TGC | 4 | 52464 | 52475 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85111903 |
| 40. | NW_001092711 | TGC | 4 | 52519 | 52531 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85111903 |
| 41. | NW_001092711 | TGA | 4 | 53491 | 53502 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 42. | NW_001092711 | GAG | 4 | 53507 | 53518 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 43. | NW_001092711 | GGT | 6 | 53923 | 53943 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85111905 |
| 44. | NW_001092711 | TGG | 5 | 54104 | 54118 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85111905 |
| 45. | NW_001092711 | GGT | 4 | 54151 | 54162 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85111905 |
| 46. | NW_001092711 | GAA | 6 | 58532 | 58548 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001092711 | GAG | 4 | 58569 | 58580 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 48. | NW_001092711 | CGA | 4 | 60717 | 60727 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001092711 | GAA | 4 | 62228 | 62239 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85111907 |