List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092578 | AGA | 4 | 978 | 989 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 2. | NW_001092578 | CGA | 4 | 1556 | 1567 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109215 |
| 3. | NW_001092578 | GCA | 4 | 2014 | 2025 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109215 |
| 4. | NW_001092578 | GAT | 6 | 2703 | 2719 | 17 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092578 | TCG | 8 | 2737 | 2760 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092578 | AGC | 5 | 2763 | 2777 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 7. | NW_001092578 | GAT | 4 | 2996 | 3007 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001092578 | TGC | 4 | 3010 | 3021 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 9. | NW_001092578 | CGC | 4 | 6398 | 6408 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85109217 |
| 10. | NW_001092578 | CAA | 4 | 7892 | 7903 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109217 |
| 11. | NW_001092578 | CAC | 4 | 8191 | 8202 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109217 |
| 12. | NW_001092578 | CTC | 5 | 8490 | 8503 | 14 | 0.00% | 33.33% | 0.00% | 66.67% | 85109217 |
| 13. | NW_001092578 | TGG | 5 | 8718 | 8732 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85109217 |
| 14. | NW_001092578 | TTC | 4 | 8916 | 8927 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85109217 |
| 15. | NW_001092578 | CGA | 4 | 8930 | 8941 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109217 |
| 16. | NW_001092578 | CCT | 4 | 9000 | 9011 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109217 |
| 17. | NW_001092578 | TGG | 4 | 9513 | 9524 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109217 |
| 18. | NW_001092578 | CCT | 4 | 10205 | 10216 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 19. | NW_001092578 | TCC | 4 | 10478 | 10489 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109219 |
| 20. | NW_001092578 | GTT | 4 | 11249 | 11260 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85109219 |
| 21. | NW_001092578 | GCC | 4 | 11279 | 11290 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85109219 |
| 22. | NW_001092578 | ATC | 4 | 12170 | 12180 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 23. | NW_001092578 | CAA | 4 | 12759 | 12770 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85109221 |
| 24. | NW_001092578 | CCT | 5 | 12771 | 12785 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85109221 |
| 25. | NW_001092578 | TCG | 4 | 13106 | 13117 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109221 |
| 26. | NW_001092578 | TGG | 4 | 13528 | 13539 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109221 |
| 27. | NW_001092578 | TGG | 4 | 13951 | 13962 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109221 |
| 28. | NW_001092578 | GTT | 4 | 14029 | 14040 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 29. | NW_001092578 | TTG | 4 | 14192 | 14203 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001092578 | GTG | 4 | 14206 | 14217 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 31. | NW_001092578 | GCG | 4 | 16065 | 16076 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85109223 |
| 32. | NW_001092578 | ACA | 9 | 16076 | 16102 | 27 | 66.67% | 0.00% | 0.00% | 33.33% | 85109223 |
| 33. | NW_001092578 | GCA | 5 | 16170 | 16184 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85109223 |
| 34. | NW_001092578 | CGA | 4 | 16475 | 16485 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85109223 |
| 35. | NW_001092578 | CTC | 4 | 16675 | 16685 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85109223 |
| 36. | NW_001092578 | TCT | 10 | 17088 | 17117 | 30 | 0.00% | 66.67% | 0.00% | 33.33% | 85109223 |
| 37. | NW_001092578 | CCG | 4 | 17167 | 17178 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85109223 |
| 38. | NW_001092578 | GAT | 4 | 20069 | 20080 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092578 | TGA | 4 | 23842 | 23853 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85109229 |
| 40. | NW_001092578 | ACG | 4 | 27423 | 27434 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 41. | NW_001092578 | CGT | 4 | 30701 | 30711 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 42. | NW_001092578 | CAG | 8 | 31023 | 31046 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 85109235 |
| 43. | NW_001092578 | GAA | 4 | 31057 | 31068 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85109235 |
| 44. | NW_001092578 | GCG | 5 | 31090 | 31104 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85109235 |
| 45. | NW_001092578 | GCT | 8 | 31291 | 31314 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85109235 |
| 46. | NW_001092578 | GCG | 5 | 31327 | 31341 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | 85109235 |
| 47. | NW_001092578 | AGA | 5 | 31415 | 31429 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85109235 |
| 48. | NW_001092578 | CTT | 4 | 31754 | 31764 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092578 | GAC | 4 | 33655 | 33665 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 50. | NW_001092578 | GAA | 4 | 33737 | 33748 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092578 | TCC | 4 | 36487 | 36499 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 52. | NW_001092578 | CCG | 6 | 38658 | 38674 | 17 | 0.00% | 0.00% | 33.33% | 66.67% | 85109241 |
| 53. | NW_001092578 | ACA | 4 | 41300 | 41311 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 54. | NW_001092578 | CGG | 4 | 42827 | 42838 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85109243 |
| 55. | NW_001092578 | CGT | 5 | 43450 | 43464 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85109243 |
| 56. | NW_001092578 | CGG | 7 | 44856 | 44876 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85109243 |
| 57. | NW_001092578 | GAG | 4 | 46090 | 46101 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109243 |
| 58. | NW_001092578 | TGC | 4 | 46525 | 46535 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 59. | NW_001092578 | TCC | 4 | 47245 | 47256 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 60. | NW_001092578 | TCC | 6 | 47593 | 47610 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 61. | NW_001092578 | TAT | 5 | 47916 | 47929 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092578 | ATA | 4 | 48335 | 48347 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092578 | ACA | 5 | 48968 | 48982 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 64. | NW_001092578 | TAT | 4 | 49681 | 49693 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092578 | ATT | 4 | 50036 | 50046 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092578 | TAT | 4 | 50472 | 50483 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092578 | CTA | 4 | 51249 | 51260 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |