List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092575 | TAC | 4 | 729 | 739 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092575 | CGT | 4 | 1686 | 1697 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 3. | NW_001092575 | GTG | 5 | 1785 | 1799 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 4. | NW_001092575 | TCA | 4 | 2484 | 2494 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 5. | NW_001092575 | AGA | 4 | 6809 | 6820 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85109152 |
| 6. | NW_001092575 | TGC | 4 | 7976 | 7987 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109152 |
| 7. | NW_001092575 | CCA | 4 | 9180 | 9190 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 8. | NW_001092575 | TCA | 4 | 9204 | 9215 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 9. | NW_001092575 | CCA | 4 | 11806 | 11817 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109156 |
| 10. | NW_001092575 | CAT | 4 | 11907 | 11918 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109156 |
| 11. | NW_001092575 | TTG | 4 | 11941 | 11952 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85109156 |
| 12. | NW_001092575 | ACC | 5 | 12334 | 12348 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85109156 |
| 13. | NW_001092575 | CTG | 4 | 12359 | 12370 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85109156 |
| 14. | NW_001092575 | GTC | 5 | 12535 | 12549 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85109156 |
| 15. | NW_001092575 | GTG | 4 | 12620 | 12630 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85109156 |
| 16. | NW_001092575 | GTG | 5 | 12665 | 12678 | 14 | 0.00% | 33.33% | 66.67% | 0.00% | 85109156 |
| 17. | NW_001092575 | GTG | 4 | 12692 | 12703 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109156 |
| 18. | NW_001092575 | GGT | 4 | 12706 | 12717 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109156 |
| 19. | NW_001092575 | GGA | 4 | 13986 | 13997 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109158 |
| 20. | NW_001092575 | CAG | 4 | 14007 | 14018 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109158 |
| 21. | NW_001092575 | CAG | 4 | 14061 | 14072 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85109158 |
| 22. | NW_001092575 | ACA | 5 | 14099 | 14113 | 15 | 66.67% | 0.00% | 0.00% | 33.33% | 85109158 |
| 23. | NW_001092575 | GCA | 9 | 14111 | 14135 | 25 | 33.33% | 0.00% | 33.33% | 33.33% | 85109158 |
| 24. | NW_001092575 | CAA | 9 | 14211 | 14237 | 27 | 66.67% | 0.00% | 0.00% | 33.33% | 85109158 |
| 25. | NW_001092575 | CAA | 8 | 14226 | 14249 | 24 | 66.67% | 0.00% | 0.00% | 33.33% | 85109158 |
| 26. | NW_001092575 | GGA | 4 | 14262 | 14273 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109158 |
| 27. | NW_001092575 | CGG | 7 | 14312 | 14332 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85109158 |
| 28. | NW_001092575 | CAC | 4 | 14405 | 14416 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109158 |
| 29. | NW_001092575 | CAC | 4 | 14456 | 14467 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109158 |
| 30. | NW_001092575 | CCA | 5 | 14727 | 14741 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85109158 |
| 31. | NW_001092575 | CAC | 4 | 14753 | 14763 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85109158 |
| 32. | NW_001092575 | CGG | 4 | 14767 | 14778 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85109158 |
| 33. | NW_001092575 | TGG | 4 | 15250 | 15261 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85109158 |
| 34. | NW_001092575 | AGG | 4 | 15331 | 15342 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109158 |
| 35. | NW_001092575 | AGG | 4 | 15355 | 15366 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85109158 |
| 36. | NW_001092575 | AGA | 4 | 15388 | 15399 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85109158 |
| 37. | NW_001092575 | ATC | 7 | 16612 | 16632 | 21 | 33.33% | 33.33% | 0.00% | 33.33% | 85109160 |
| 38. | NW_001092575 | TCA | 4 | 16754 | 16765 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85109160 |
| 39. | NW_001092575 | CCT | 4 | 16859 | 16870 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109160 |
| 40. | NW_001092575 | CGT | 6 | 16963 | 16983 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85109160 |
| 41. | NW_001092575 | TCC | 4 | 17467 | 17478 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85109160 |
| 42. | NW_001092575 | TGA | 4 | 17670 | 17681 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 43. | NW_001092575 | CAT | 5 | 18002 | 18016 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092575 | ACA | 15 | 18714 | 18758 | 45 | 66.67% | 0.00% | 0.00% | 33.33% | 85109162 |
| 45. | NW_001092575 | AGA | 4 | 18935 | 18945 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85109162 |
| 46. | NW_001092575 | AAC | 4 | 19080 | 19092 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85109162 |
| 47. | NW_001092575 | GAA | 5 | 19180 | 19194 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85109162 |
| 48. | NW_001092575 | ATC | 4 | 19803 | 19814 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092575 | CTT | 51 | 19840 | 19992 | 153 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092575 | ACC | 8 | 20484 | 20507 | 24 | 33.33% | 0.00% | 0.00% | 66.67% | 85109164 |
| 51. | NW_001092575 | CCA | 4 | 20885 | 20896 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85109164 |
| 52. | NW_001092575 | GCG | 5 | 21321 | 21336 | 16 | 0.00% | 0.00% | 66.67% | 33.33% | 85109164 |
| 53. | NW_001092575 | CCG | 5 | 23729 | 23743 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85109164 |
| 54. | NW_001092575 | TGT | 4 | 25201 | 25212 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85109164 |
| 55. | NW_001092575 | CGC | 4 | 26020 | 26032 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85109164 |
| 56. | NW_001092575 | TCG | 4 | 26332 | 26343 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 57. | NW_001092575 | GCC | 4 | 28938 | 28949 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 58. | NW_001092575 | CAC | 5 | 29046 | 29060 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 59. | NW_001092575 | GCC | 5 | 30056 | 30070 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85109166 |
| 60. | NW_001092575 | TGC | 4 | 35493 | 35504 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 61. | NW_001092575 | ATT | 4 | 36830 | 36841 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092575 | ATT | 4 | 37770 | 37782 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092575 | ATT | 4 | 38076 | 38088 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001092575 | TAA | 4 | 38552 | 38564 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092575 | AAT | 4 | 38753 | 38763 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092575 | TCC | 4 | 38984 | 38995 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |