List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092532 | ATT | 4 | 596 | 608 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092532 | CTT | 4 | 1905 | 1916 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092532 | GTA | 4 | 2863 | 2874 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092532 | TAT | 4 | 3095 | 3106 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092532 | ATT | 4 | 3718 | 3729 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092532 | TAA | 5 | 4230 | 4243 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092532 | GTA | 5 | 4578 | 4592 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001092532 | TAT | 4 | 4591 | 4602 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092532 | AAT | 4 | 5604 | 5615 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092532 | ATG | 4 | 7578 | 7590 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 11. | NW_001092532 | CCT | 4 | 12705 | 12715 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 12. | NW_001092532 | ACA | 4 | 15553 | 15564 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85105556 |
| 13. | NW_001092532 | ACA | 4 | 15586 | 15597 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85105556 |
| 14. | NW_001092532 | CCT | 4 | 16273 | 16283 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85105556 |
| 15. | NW_001092532 | TCT | 4 | 17314 | 17326 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092532 | GTG | 4 | 18294 | 18304 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85105560 |
| 17. | NW_001092532 | AAC | 15 | 21912 | 21957 | 46 | 66.67% | 0.00% | 0.00% | 33.33% | 85105564 |
| 18. | NW_001092532 | GCA | 7 | 24504 | 24524 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 19. | NW_001092532 | GTT | 7 | 24574 | 24594 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092532 | TGG | 4 | 24907 | 24918 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 21. | NW_001092532 | CTC | 4 | 26460 | 26471 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85105567 |
| 22. | NW_001092532 | GAA | 4 | 26492 | 26503 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85105567 |
| 23. | NW_001092532 | CGG | 4 | 28062 | 28073 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 24. | NW_001092532 | AGA | 11 | 29406 | 29436 | 31 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 25. | NW_001092532 | GTT | 4 | 30468 | 30478 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092532 | CGC | 4 | 32559 | 32570 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 27. | NW_001092532 | CAG | 4 | 37477 | 37488 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105571 |
| 28. | NW_001092532 | CAG | 6 | 37786 | 37803 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85105571 |
| 29. | NW_001092532 | TGG | 4 | 38822 | 38832 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001092532 | CAC | 4 | 39876 | 39886 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 31. | NW_001092532 | CAT | 4 | 40250 | 40260 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092532 | GAC | 5 | 40899 | 40913 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 33. | NW_001092532 | CGC | 4 | 41709 | 41719 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 34. | NW_001092532 | ACA | 6 | 43309 | 43326 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092532 | AAG | 4 | 45414 | 45424 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092532 | AGC | 5 | 47970 | 47984 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092532 | ACC | 5 | 47982 | 47996 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 38. | NW_001092532 | AGG | 4 | 49448 | 49459 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 39. | NW_001092532 | ACA | 4 | 50856 | 50866 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 40. | NW_001092532 | GCA | 4 | 56316 | 56327 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85105587 |
| 41. | NW_001092532 | AGG | 4 | 56448 | 56459 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85105587 |
| 42. | NW_001092532 | GGA | 4 | 56494 | 56505 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85105587 |
| 43. | NW_001092532 | GGT | 4 | 56672 | 56683 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85105587 |
| 44. | NW_001092532 | GCG | 4 | 56705 | 56716 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85105587 |