List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092525 | GGCG | 3 | 1000 | 1012 | 13 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 2. | NW_001092525 | AATA | 3 | 1298 | 1309 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092525 | CTTT | 4 | 1642 | 1657 | 16 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 4. | NW_001092525 | ACAA | 3 | 2257 | 2268 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 5. | NW_001092525 | CCAT | 3 | 6010 | 6021 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85105066 |
| 6. | NW_001092525 | GTAG | 4 | 7728 | 7743 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 7. | NW_001092525 | CAAA | 4 | 7950 | 7965 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NW_001092525 | AACT | 3 | 7974 | 7984 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092525 | TGTC | 4 | 8087 | 8102 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 10. | NW_001092525 | CATG | 3 | 12459 | 12470 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85105076 |
| 11. | NW_001092525 | AAGG | 3 | 13001 | 13013 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 85105076 |
| 12. | NW_001092525 | GAAC | 3 | 13962 | 13973 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 13. | NW_001092525 | GAGG | 3 | 14485 | 14496 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 14. | NW_001092525 | CGAA | 3 | 16738 | 16750 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | 85105079 |
| 15. | NW_001092525 | TGAT | 3 | 19298 | 19309 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NW_001092525 | GTGG | 3 | 19488 | 19499 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 17. | NW_001092525 | CAAC | 9 | 20065 | 20100 | 36 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 18. | NW_001092525 | AGCG | 3 | 25404 | 25415 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 19. | NW_001092525 | ACGG | 3 | 26567 | 26579 | 13 | 25.00% | 0.00% | 50.00% | 25.00% | 85105090 |
| 20. | NW_001092525 | CCAA | 3 | 27513 | 27523 | 11 | 50.00% | 0.00% | 0.00% | 50.00% | 85105090 |
| 21. | NW_001092525 | AGGG | 3 | 27811 | 27822 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85105090 |
| 22. | NW_001092525 | CCTC | 3 | 30827 | 30838 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 85105097 |
| 23. | NW_001092525 | GAAA | 3 | 30857 | 30867 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 85105097 |
| 24. | NW_001092525 | GATG | 7 | 32128 | 32155 | 28 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092525 | TGAT | 3 | 32995 | 33007 | 13 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092525 | GTGG | 3 | 33275 | 33287 | 13 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 27. | NW_001092525 | GCGT | 3 | 35101 | 35111 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 28. | NW_001092525 | GTAT | 5 | 37909 | 37929 | 21 | 25.00% | 50.00% | 25.00% | 0.00% | 85105105 |
| 29. | NW_001092525 | CTAC | 4 | 38413 | 38428 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 30. | NW_001092525 | TTGG | 3 | 39375 | 39386 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 31. | NW_001092525 | GCTT | 3 | 39483 | 39493 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 32. | NW_001092525 | GTAC | 3 | 46991 | 47002 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 33. | NW_001092525 | CTAC | 7 | 47471 | 47501 | 31 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |