List of
Perfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092484 | GTTG | 3 | 278 | 289 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 85101859 |
| 2. | NW_001092484 | ACCA | 7 | 1218 | 1245 | 28 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 3. | NW_001092484 | CGTT | 3 | 1298 | 1309 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 4. | NW_001092484 | GTGG | 3 | 3435 | 3446 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 5. | NW_001092484 | CGGG | 3 | 3814 | 3825 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 6. | NW_001092484 | ACCA | 3 | 10037 | 10048 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 7. | NW_001092484 | GAAA | 5 | 10108 | 10127 | 20 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NW_001092484 | ACAT | 4 | 10408 | 10423 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 9. | NW_001092484 | CCAC | 4 | 10575 | 10590 | 16 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 10. | NW_001092484 | TATG | 3 | 10616 | 10627 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 11. | NW_001092484 | AAGC | 3 | 12517 | 12528 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 12. | NW_001092484 | CTAG | 3 | 24718 | 24729 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 13. | NW_001092484 | GTAG | 3 | 24797 | 24808 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 14. | NW_001092484 | CATC | 3 | 25262 | 25273 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 15. | NW_001092484 | CTTC | 4 | 25274 | 25289 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 16. | NW_001092484 | AGCT | 3 | 32590 | 32601 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85101903 |
| 17. | NW_001092484 | AGAA | 3 | 32929 | 32940 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 18. | NW_001092484 | GTGG | 3 | 32961 | 32972 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 19. | NW_001092484 | GTAG | 3 | 38753 | 38764 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 20. | NW_001092484 | AAAG | 3 | 40918 | 40929 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NW_001092484 | CATC | 3 | 42459 | 42470 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 22. | NW_001092484 | TACC | 4 | 42635 | 42650 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 23. | NW_001092484 | TACG | 4 | 45456 | 45471 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 24. | NW_001092484 | CCAT | 3 | 46286 | 46297 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 25. | NW_001092484 | GACT | 3 | 51881 | 51892 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 26. | NW_001092484 | GAGC | 3 | 53782 | 53793 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 27. | NW_001092484 | GATG | 3 | 55165 | 55176 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 85101933 |
| 28. | NW_001092484 | TGAA | 3 | 55179 | 55190 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 85101933 |
| 29. | NW_001092484 | TTAC | 3 | 55548 | 55559 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 85101933 |
| 30. | NW_001092484 | TGTA | 3 | 56051 | 56062 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 85101933 |
| 31. | NW_001092484 | CATT | 3 | 56256 | 56267 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 32. | NW_001092484 | TTTC | 3 | 56959 | 56970 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NW_001092484 | TGCT | 4 | 57029 | 57044 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NW_001092484 | CCTA | 3 | 88825 | 88836 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 35. | NW_001092484 | TACC | 4 | 93953 | 93968 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 36. | NW_001092484 | ACCT | 3 | 96072 | 96083 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85101973 |
| 37. | NW_001092484 | GATG | 3 | 102408 | 102419 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 38. | NW_001092484 | GCGT | 3 | 102457 | 102468 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 39. | NW_001092484 | TACC | 9 | 106380 | 106415 | 36 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 40. | NW_001092484 | GAGG | 3 | 108663 | 108674 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85101990 |
| 41. | NW_001092484 | TATT | 3 | 113488 | 113499 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092484 | GACG | 4 | 127044 | 127059 | 16 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 43. | NW_001092484 | AACC | 3 | 139087 | 139098 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 44. | NW_001092484 | TACC | 3 | 139387 | 139398 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 45. | NW_001092484 | GGTA | 3 | 139699 | 139710 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 46. | NW_001092484 | TACA | 5 | 139833 | 139852 | 20 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 47. | NW_001092484 | TGAA | 3 | 139937 | 139948 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 48. | NW_001092484 | AGGT | 3 | 143873 | 143884 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |