List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092475 | GCG | 4 | 62 | 73 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 2. | NW_001092475 | GGC | 4 | 1054 | 1065 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85100256 |
| 3. | NW_001092475 | TGG | 4 | 1209 | 1220 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85100256 |
| 4. | NW_001092475 | GTG | 5 | 2630 | 2644 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85100256 |
| 5. | NW_001092475 | CGG | 4 | 2751 | 2762 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85100256 |
| 6. | NW_001092475 | TGG | 4 | 2766 | 2777 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85100256 |
| 7. | NW_001092475 | GGT | 5 | 2800 | 2814 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85100256 |
| 8. | NW_001092475 | CGG | 8 | 2820 | 2843 | 24 | 0.00% | 0.00% | 66.67% | 33.33% | 85100256 |
| 9. | NW_001092475 | ACC | 7 | 4755 | 4775 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85100260 |
| 10. | NW_001092475 | TGA | 4 | 5297 | 5308 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85100260 |
| 11. | NW_001092475 | TTG | 4 | 5309 | 5319 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85100260 |
| 12. | NW_001092475 | GGA | 4 | 5337 | 5348 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85100260 |
| 13. | NW_001092475 | CCT | 4 | 5680 | 5691 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85100260 |
| 14. | NW_001092475 | CAT | 4 | 6218 | 6229 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85100260 |
| 15. | NW_001092475 | TCT | 4 | 7583 | 7593 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 16. | NW_001092475 | GTT | 4 | 9053 | 9063 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 17. | NW_001092475 | GAG | 4 | 10306 | 10317 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85100272 |
| 18. | NW_001092475 | CAT | 4 | 11243 | 11254 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 19. | NW_001092475 | TTG | 4 | 14403 | 14414 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092475 | GAC | 4 | 15856 | 15867 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85100284 |
| 21. | NW_001092475 | TGG | 4 | 16631 | 16642 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85100284 |
| 22. | NW_001092475 | TGA | 4 | 17417 | 17428 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85100284 |
| 23. | NW_001092475 | GAC | 4 | 19431 | 19442 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85100288 |
| 24. | NW_001092475 | GAG | 4 | 19920 | 19931 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85100288 |
| 25. | NW_001092475 | CGA | 4 | 24106 | 24117 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85100292 |
| 26. | NW_001092475 | ATC | 4 | 25644 | 25654 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85100296 |
| 27. | NW_001092475 | TGC | 4 | 27396 | 27407 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85100296 |
| 28. | NW_001092475 | GAC | 4 | 30247 | 30258 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85100296 |
| 29. | NW_001092475 | GTG | 4 | 39238 | 39250 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85100300 |
| 30. | NW_001092475 | TCT | 4 | 49622 | 49632 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 31. | NW_001092475 | GGT | 4 | 51134 | 51145 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 32. | NW_001092475 | AGA | 4 | 52580 | 52590 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092475 | ATT | 4 | 54317 | 54328 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092475 | TAA | 4 | 55021 | 55032 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092475 | TTG | 4 | 55967 | 55978 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092475 | CAG | 4 | 56634 | 56648 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092475 | GGC | 4 | 59010 | 59021 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 38. | NW_001092475 | TTG | 4 | 59177 | 59188 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092475 | GGC | 6 | 59393 | 59410 | 18 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 40. | NW_001092475 | CCG | 4 | 60732 | 60743 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85100316 |
| 41. | NW_001092475 | TAC | 4 | 62537 | 62547 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092475 | TCT | 4 | 63269 | 63280 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001092475 | ATC | 14 | 65038 | 65078 | 41 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092475 | CAC | 4 | 66733 | 66745 | 13 | 33.33% | 0.00% | 0.00% | 66.67% | 85100325 |
| 45. | NW_001092475 | CAT | 4 | 69055 | 69066 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 46. | NW_001092475 | TCA | 4 | 72897 | 72908 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85100329 |
| 47. | NW_001092475 | TGC | 6 | 72993 | 73010 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85100329 |
| 48. | NW_001092475 | GTG | 4 | 73359 | 73370 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85100329 |
| 49. | NW_001092475 | TCT | 4 | 74931 | 74942 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85100329 |
| 50. | NW_001092475 | GGC | 4 | 76267 | 76278 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 51. | NW_001092475 | GAA | 4 | 77322 | 77332 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 85100333 |
| 52. | NW_001092475 | GGT | 7 | 79656 | 79676 | 21 | 0.00% | 33.33% | 66.67% | 0.00% | 85100337 |
| 53. | NW_001092475 | GGA | 4 | 81467 | 81477 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85100341 |
| 54. | NW_001092475 | GAG | 15 | 81635 | 81677 | 43 | 33.33% | 0.00% | 66.67% | 0.00% | 85100341 |
| 55. | NW_001092475 | GAG | 4 | 81744 | 81755 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85100341 |
| 56. | NW_001092475 | ACC | 4 | 82680 | 82691 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 57. | NW_001092475 | GAG | 5 | 83308 | 83321 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 85100345 |
| 58. | NW_001092475 | AGG | 4 | 83600 | 83610 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |