List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092427 | GGA | 4 | 86 | 97 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 2. | NW_001092427 | CTC | 4 | 1049 | 1059 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85096412 |
| 3. | NW_001092427 | GAA | 4 | 2682 | 2692 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092427 | AAG | 4 | 3834 | 3845 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096416 |
| 5. | NW_001092427 | GAA | 4 | 3967 | 3978 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096416 |
| 6. | NW_001092427 | GGA | 5 | 4844 | 4859 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | 85096416 |
| 7. | NW_001092427 | AGA | 4 | 4906 | 4917 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001092427 | GAA | 4 | 4922 | 4932 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092427 | CCG | 4 | 5686 | 5697 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85096421 |
| 10. | NW_001092427 | GTT | 4 | 5894 | 5905 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85096421 |
| 11. | NW_001092427 | AGG | 5 | 5932 | 5946 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85096421 |
| 12. | NW_001092427 | GGA | 4 | 6295 | 6306 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85096421 |
| 13. | NW_001092427 | CGA | 4 | 12952 | 12963 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092427 | GTG | 8 | 12986 | 13009 | 24 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 15. | NW_001092427 | CAG | 4 | 14532 | 14543 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 16. | NW_001092427 | CCA | 4 | 17101 | 17112 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 17. | NW_001092427 | ACC | 4 | 17229 | 17240 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85096437 |
| 18. | NW_001092427 | TGC | 4 | 17647 | 17658 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85096437 |
| 19. | NW_001092427 | GAG | 4 | 22567 | 22577 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 20. | NW_001092427 | TCA | 4 | 22872 | 22882 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092427 | CAG | 4 | 22901 | 22912 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 22. | NW_001092427 | CGT | 4 | 23897 | 23907 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 85096451 |
| 23. | NW_001092427 | TTG | 4 | 24013 | 24024 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85096451 |
| 24. | NW_001092427 | GGA | 4 | 24072 | 24082 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85096451 |
| 25. | NW_001092427 | GAG | 4 | 24489 | 24501 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85096451 |
| 26. | NW_001092427 | TGC | 4 | 24896 | 24907 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85096451 |
| 27. | NW_001092427 | GAG | 4 | 25412 | 25423 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85096451 |
| 28. | NW_001092427 | GAC | 4 | 25570 | 25581 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85096451 |
| 29. | NW_001092427 | GTG | 5 | 25607 | 25621 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85096451 |
| 30. | NW_001092427 | GTG | 4 | 25688 | 25699 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 31. | NW_001092427 | AGA | 4 | 26753 | 26764 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092427 | TCA | 4 | 28098 | 28109 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001092427 | CCG | 4 | 32039 | 32050 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85096461 |
| 34. | NW_001092427 | GAC | 4 | 32074 | 32084 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85096461 |
| 35. | NW_001092427 | GTC | 5 | 32646 | 32660 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85096461 |
| 36. | NW_001092427 | CGA | 4 | 33087 | 33098 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 37. | NW_001092427 | GAG | 4 | 38339 | 38350 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 38. | NW_001092427 | CCT | 4 | 39432 | 39443 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 39. | NW_001092427 | GGT | 4 | 40280 | 40292 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 40. | NW_001092427 | CAC | 5 | 42852 | 42866 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 41. | NW_001092427 | CCT | 4 | 43407 | 43418 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 42. | NW_001092427 | CAA | 4 | 43708 | 43719 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85096487 |
| 43. | NW_001092427 | CCT | 4 | 47439 | 47450 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85096491 |
| 44. | NW_001092427 | AAG | 4 | 49949 | 49960 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 45. | NW_001092427 | GAG | 4 | 53751 | 53762 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 46. | NW_001092427 | AGA | 4 | 54220 | 54231 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 47. | NW_001092427 | ATG | 4 | 55257 | 55268 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092427 | TCA | 4 | 55931 | 55942 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 49. | NW_001092427 | CTT | 4 | 57411 | 57422 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 50. | NW_001092427 | GGA | 4 | 59629 | 59639 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85096503 |
| 51. | NW_001092427 | AGG | 4 | 60946 | 60958 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85096507 |
| 52. | NW_001092427 | GTG | 4 | 61198 | 61209 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85096507 |
| 53. | NW_001092427 | ACC | 4 | 62394 | 62405 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85096512 |
| 54. | NW_001092427 | TCC | 4 | 64099 | 64110 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85096516 |
| 55. | NW_001092427 | AGG | 4 | 64383 | 64395 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85096516 |
| 56. | NW_001092427 | GTG | 5 | 66148 | 66162 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85096520 |
| 57. | NW_001092427 | ATC | 4 | 66359 | 66371 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | 85096520 |
| 58. | NW_001092427 | GTT | 4 | 68070 | 68080 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85096520 |
| 59. | NW_001092427 | GTC | 4 | 68336 | 68347 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85096520 |
| 60. | NW_001092427 | AAG | 4 | 74968 | 74979 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096529 |
| 61. | NW_001092427 | TCC | 5 | 75864 | 75878 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85096529 |
| 62. | NW_001092427 | ACC | 4 | 75980 | 75993 | 14 | 33.33% | 0.00% | 0.00% | 66.67% | 85096529 |
| 63. | NW_001092427 | ACA | 4 | 76025 | 76036 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85096529 |
| 64. | NW_001092427 | AGA | 4 | 76167 | 76178 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096529 |
| 65. | NW_001092427 | GGA | 5 | 76173 | 76187 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85096529 |
| 66. | NW_001092427 | GAA | 5 | 76230 | 76244 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 85096529 |
| 67. | NW_001092427 | AGA | 4 | 76250 | 76261 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096529 |
| 68. | NW_001092427 | GAC | 4 | 76900 | 76911 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85096529 |
| 69. | NW_001092427 | AAG | 4 | 79354 | 79365 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85096529 |
| 70. | NW_001092427 | CAG | 4 | 79652 | 79663 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85096529 |
| 71. | NW_001092427 | GGA | 4 | 81261 | 81272 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 72. | NW_001092427 | TAA | 4 | 82429 | 82439 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 73. | NW_001092427 | GGA | 4 | 83287 | 83298 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 74. | NW_001092427 | TAA | 4 | 83424 | 83435 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 75. | NW_001092427 | AAT | 4 | 84256 | 84266 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 76. | NW_001092427 | AGA | 4 | 84765 | 84776 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 77. | NW_001092427 | ATA | 4 | 86133 | 86144 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |