List of
Perfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092403 | TCT | 5 | 2524 | 2538 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85095221 |
| 2. | NW_001092403 | CTT | 4 | 7927 | 7938 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85095225 |
| 3. | NW_001092403 | TCC | 14 | 8097 | 8138 | 42 | 0.00% | 33.33% | 0.00% | 66.67% | 85095225 |
| 4. | NW_001092403 | TCC | 4 | 8319 | 8330 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85095225 |
| 5. | NW_001092403 | CGG | 4 | 11647 | 11658 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85095228 |
| 6. | NW_001092403 | AGT | 4 | 13705 | 13716 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092403 | TCG | 4 | 19129 | 19140 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85095232 |
| 8. | NW_001092403 | GTT | 4 | 27132 | 27143 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092403 | AGG | 7 | 28133 | 28153 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85095244 |
| 10. | NW_001092403 | TGT | 5 | 35979 | 35993 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85095261 |
| 11. | NW_001092403 | GCT | 14 | 37274 | 37315 | 42 | 0.00% | 33.33% | 33.33% | 33.33% | 85095261 |
| 12. | NW_001092403 | GTG | 4 | 38068 | 38079 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85095261 |
| 13. | NW_001092403 | GGT | 5 | 38092 | 38106 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85095261 |
| 14. | NW_001092403 | TGC | 4 | 42679 | 42690 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 15. | NW_001092403 | ACC | 4 | 48697 | 48708 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85095273 |
| 16. | NW_001092403 | GAC | 10 | 49030 | 49059 | 30 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 17. | NW_001092403 | ATG | 4 | 56452 | 56463 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 18. | NW_001092403 | GCC | 4 | 57019 | 57030 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | Non-Coding |
| 19. | NW_001092403 | GAA | 4 | 59150 | 59161 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092403 | GAC | 4 | 59605 | 59616 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 21. | NW_001092403 | TGT | 4 | 67827 | 67838 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85095292 |
| 22. | NW_001092403 | TGC | 6 | 69556 | 69573 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 85095292 |
| 23. | NW_001092403 | TGC | 5 | 70918 | 70932 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85095295 |
| 24. | NW_001092403 | GGC | 4 | 71382 | 71393 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 25. | NW_001092403 | TCT | 4 | 85658 | 85669 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001092403 | TCT | 4 | 85673 | 85684 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 27. | NW_001092403 | AAC | 6 | 86781 | 86798 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 85095316 |
| 28. | NW_001092403 | CAA | 9 | 86934 | 86960 | 27 | 66.67% | 0.00% | 0.00% | 33.33% | 85095316 |
| 29. | NW_001092403 | AGC | 6 | 90090 | 90107 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 30. | NW_001092403 | CTG | 4 | 90902 | 90913 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 31. | NW_001092403 | GAC | 4 | 91463 | 91474 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095320 |
| 32. | NW_001092403 | ACA | 6 | 91479 | 91496 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 85095320 |
| 33. | NW_001092403 | TGT | 5 | 98452 | 98466 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 34. | NW_001092403 | AGA | 6 | 98578 | 98595 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 35. | NW_001092403 | CGG | 5 | 99253 | 99267 | 15 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 36. | NW_001092403 | TCT | 9 | 100017 | 100043 | 27 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092403 | ACC | 4 | 107455 | 107466 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 38. | NW_001092403 | AGA | 4 | 116103 | 116114 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092403 | TGA | 5 | 116293 | 116307 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 40. | NW_001092403 | GCT | 5 | 118145 | 118159 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85095337 |
| 41. | NW_001092403 | ATC | 5 | 119031 | 119045 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85095337 |
| 42. | NW_001092403 | GAG | 4 | 119551 | 119562 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85095337 |
| 43. | NW_001092403 | AGA | 8 | 120888 | 120911 | 24 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001092403 | CAA | 4 | 121942 | 121953 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 45. | NW_001092403 | ACT | 27 | 124691 | 124771 | 81 | 33.33% | 33.33% | 0.00% | 33.33% | 85095346 |
| 46. | NW_001092403 | CTG | 8 | 126811 | 126834 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 85095350 |
| 47. | NW_001092403 | GTT | 5 | 129165 | 129179 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092403 | GCA | 4 | 134134 | 134145 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85095358 |
| 49. | NW_001092403 | TGC | 9 | 135621 | 135647 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | 85095363 |
| 50. | NW_001092403 | CTC | 11 | 138175 | 138207 | 33 | 0.00% | 33.33% | 0.00% | 66.67% | 85095367 |
| 51. | NW_001092403 | GTT | 5 | 138417 | 138431 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85095367 |
| 52. | NW_001092403 | GTC | 7 | 143325 | 143345 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85095376 |
| 53. | NW_001092403 | GCC | 5 | 144140 | 144154 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85095376 |
| 54. | NW_001092403 | GCT | 6 | 144710 | 144727 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 55. | NW_001092403 | GAA | 4 | 151885 | 151896 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 56. | NW_001092403 | GCT | 7 | 152288 | 152308 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 57. | NW_001092403 | TCC | 5 | 153706 | 153720 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85095390 |
| 58. | NW_001092403 | CAC | 6 | 158902 | 158919 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 59. | NW_001092403 | CTC | 4 | 160219 | 160230 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85095398 |
| 60. | NW_001092403 | GTT | 4 | 161558 | 161569 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85095402 |
| 61. | NW_001092403 | GTT | 4 | 162002 | 162013 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85095402 |
| 62. | NW_001092403 | CTT | 5 | 165670 | 165684 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85095406 |
| 63. | NW_001092403 | GTG | 6 | 171544 | 171561 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85095414 |
| 64. | NW_001092403 | GTG | 4 | 171565 | 171576 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85095414 |
| 65. | NW_001092403 | GTT | 6 | 171577 | 171594 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85095414 |
| 66. | NW_001092403 | CAC | 4 | 175336 | 175347 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85095418 |
| 67. | NW_001092403 | CGA | 5 | 178439 | 178453 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85095427 |
| 68. | NW_001092403 | CGA | 4 | 180844 | 180855 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 69. | NW_001092403 | CCT | 4 | 184167 | 184178 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 70. | NW_001092403 | ACG | 4 | 189640 | 189651 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 71. | NW_001092403 | CAC | 6 | 189683 | 189700 | 18 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 72. | NW_001092403 | GCG | 7 | 192159 | 192179 | 21 | 0.00% | 0.00% | 66.67% | 33.33% | 85095439 |
| 73. | NW_001092403 | TGG | 4 | 192193 | 192204 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85095439 |
| 74. | NW_001092403 | TGA | 4 | 199010 | 199021 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 75. | NW_001092403 | AAG | 4 | 213899 | 213910 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 76. | NW_001092403 | GTC | 7 | 242033 | 242053 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |