List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092386 | AGG | 8 | 3 | 26 | 24 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 2. | NW_001092386 | TTG | 4 | 45 | 56 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 3. | NW_001092386 | AGT | 5 | 252 | 266 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092386 | GCT | 4 | 6915 | 6926 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85092835 |
| 5. | NW_001092386 | CTC | 4 | 6984 | 6995 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85092835 |
| 6. | NW_001092386 | AGT | 4 | 7525 | 7535 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092386 | TCT | 4 | 7810 | 7820 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 8. | NW_001092386 | GCA | 4 | 8005 | 8015 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 9. | NW_001092386 | ACA | 4 | 10200 | 10212 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 10. | NW_001092386 | CAA | 4 | 11318 | 11329 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85092837 |
| 11. | NW_001092386 | CTT | 4 | 12197 | 12208 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85092839 |
| 12. | NW_001092386 | GTG | 14 | 14297 | 14338 | 42 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 13. | NW_001092386 | CTT | 4 | 14447 | 14458 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 14. | NW_001092386 | TTC | 5 | 14941 | 14955 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 15. | NW_001092386 | TGA | 4 | 16493 | 16504 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85092841 |
| 16. | NW_001092386 | TGT | 36 | 20247 | 20353 | 107 | 0.00% | 66.67% | 33.33% | 0.00% | 85092843 |
| 17. | NW_001092386 | CGC | 4 | 20547 | 20558 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85092843 |
| 18. | NW_001092386 | TGT | 11 | 20583 | 20615 | 33 | 0.00% | 66.67% | 33.33% | 0.00% | 85092843 |
| 19. | NW_001092386 | GTT | 4 | 20647 | 20658 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85092843 |
| 20. | NW_001092386 | AGC | 9 | 20794 | 20820 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85092843 |
| 21. | NW_001092386 | AGA | 5 | 20809 | 20829 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | 85092843 |
| 22. | NW_001092386 | GAG | 7 | 21008 | 21028 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85092843 |
| 23. | NW_001092386 | GAT | 4 | 21082 | 21093 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85092843 |
| 24. | NW_001092386 | TGG | 4 | 21228 | 21239 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 25. | NW_001092386 | TGT | 4 | 21385 | 21395 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092386 | TGT | 4 | 21414 | 21424 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 27. | NW_001092386 | AGG | 6 | 23322 | 23339 | 18 | 33.33% | 0.00% | 66.67% | 0.00% | 85092845 |
| 28. | NW_001092386 | AGA | 4 | 23642 | 23653 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092845 |
| 29. | NW_001092386 | AGA | 4 | 24114 | 24126 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | 85092845 |
| 30. | NW_001092386 | GAT | 4 | 25328 | 25338 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85092845 |
| 31. | NW_001092386 | TGC | 4 | 26198 | 26210 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 32. | NW_001092386 | GAA | 4 | 26682 | 26693 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092386 | CGC | 4 | 32653 | 32663 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85092849 |
| 34. | NW_001092386 | ACA | 7 | 34044 | 34064 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | 85092849 |
| 35. | NW_001092386 | CCT | 4 | 34148 | 34159 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85092849 |
| 36. | NW_001092386 | GGT | 5 | 34846 | 34860 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092386 | GAC | 4 | 35121 | 35131 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 38. | NW_001092386 | CAA | 4 | 37593 | 37603 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092386 | TGG | 4 | 38748 | 38759 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85092855 |
| 40. | NW_001092386 | TGA | 4 | 39057 | 39068 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001092386 | AGA | 9 | 45612 | 45638 | 27 | 66.67% | 0.00% | 33.33% | 0.00% | 85092861 |
| 42. | NW_001092386 | TAT | 4 | 47375 | 47386 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092386 | CTA | 4 | 47626 | 47637 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092386 | TAT | 5 | 47757 | 47771 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |