List of
Perfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092346 | CAC | 4 | 62 | 73 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001092346 | TCA | 5 | 212 | 226 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NW_001092346 | TGG | 5 | 835 | 849 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 4. | NW_001092346 | ACA | 4 | 5373 | 5384 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85091994 |
| 5. | NW_001092346 | GAG | 5 | 5546 | 5560 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85091994 |
| 6. | NW_001092346 | CCT | 4 | 6551 | 6562 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85091996 |
| 7. | NW_001092346 | ATC | 4 | 6826 | 6837 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85091996 |
| 8. | NW_001092346 | AGA | 4 | 7636 | 7647 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85091996 |
| 9. | NW_001092346 | GCA | 9 | 9587 | 9613 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85091996 |
| 10. | NW_001092346 | CTT | 5 | 11167 | 11181 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 11. | NW_001092346 | TGG | 4 | 13312 | 13323 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85091998 |
| 12. | NW_001092346 | GGT | 10 | 17021 | 17050 | 30 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 13. | NW_001092346 | GAC | 6 | 34066 | 34083 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001092346 | GTG | 4 | 35943 | 35954 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 15. | NW_001092346 | TGC | 5 | 38794 | 38808 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85092012 |
| 16. | NW_001092346 | GAA | 6 | 38848 | 38865 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | 85092012 |
| 17. | NW_001092346 | AGA | 4 | 38955 | 38966 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092012 |
| 18. | NW_001092346 | GTT | 4 | 41111 | 41122 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85092014 |
| 19. | NW_001092346 | CAG | 6 | 41185 | 41202 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85092014 |
| 20. | NW_001092346 | GAG | 4 | 44120 | 44131 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85092016 |
| 21. | NW_001092346 | CAC | 5 | 46140 | 46154 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85092018 |
| 22. | NW_001092346 | CAT | 5 | 46188 | 46202 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85092018 |
| 23. | NW_001092346 | GAG | 4 | 46685 | 46696 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85092018 |
| 24. | NW_001092346 | GAC | 5 | 46706 | 46720 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85092018 |
| 25. | NW_001092346 | GAG | 5 | 47090 | 47104 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 85092018 |
| 26. | NW_001092346 | TCC | 4 | 52365 | 52376 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85092022 |
| 27. | NW_001092346 | CAG | 7 | 52444 | 52464 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85092022 |
| 28. | NW_001092346 | CAG | 5 | 52756 | 52770 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85092022 |
| 29. | NW_001092346 | CTC | 4 | 54766 | 54777 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85092024 |
| 30. | NW_001092346 | CAG | 4 | 55046 | 55057 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85092024 |
| 31. | NW_001092346 | TGT | 6 | 57791 | 57808 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85092026 |
| 32. | NW_001092346 | GGT | 6 | 62635 | 62652 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85092030 |
| 33. | NW_001092346 | CTA | 4 | 63026 | 63037 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85092030 |
| 34. | NW_001092346 | GAA | 4 | 63174 | 63185 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092030 |
| 35. | NW_001092346 | TAC | 4 | 64472 | 64483 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85092032 |
| 36. | NW_001092346 | CCA | 4 | 64693 | 64704 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85092032 |
| 37. | NW_001092346 | CCT | 5 | 65289 | 65303 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85092032 |
| 38. | NW_001092346 | TCC | 5 | 66430 | 66444 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85092032 |
| 39. | NW_001092346 | CGA | 6 | 73036 | 73053 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 40. | NW_001092346 | AAG | 4 | 76491 | 76502 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092036 |
| 41. | NW_001092346 | GAA | 4 | 76586 | 76597 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092036 |
| 42. | NW_001092346 | AAG | 4 | 76710 | 76721 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85092036 |
| 43. | NW_001092346 | GGC | 4 | 88310 | 88321 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85092046 |
| 44. | NW_001092346 | TCG | 4 | 91124 | 91135 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 45. | NW_001092346 | GTC | 5 | 91138 | 91152 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 46. | NW_001092346 | TTA | 4 | 93289 | 93300 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092346 | ATT | 4 | 93947 | 93958 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092346 | CTC | 4 | 94382 | 94393 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 49. | NW_001092346 | GAG | 4 | 95028 | 95039 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 50. | NW_001092346 | GAG | 4 | 95046 | 95057 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 51. | NW_001092346 | GTA | 5 | 97619 | 97633 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001092346 | TAT | 5 | 101042 | 101056 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092346 | TAT | 4 | 101790 | 101801 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092346 | TAA | 4 | 101936 | 101947 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092346 | GCC | 4 | 109413 | 109424 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85092054 |
| 56. | NW_001092346 | ATC | 5 | 113209 | 113223 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 85092056 |
| 57. | NW_001092346 | GCG | 4 | 116186 | 116197 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85092058 |
| 58. | NW_001092346 | GGC | 6 | 119594 | 119611 | 18 | 0.00% | 0.00% | 66.67% | 33.33% | 85092058 |
| 59. | NW_001092346 | GAA | 4 | 124763 | 124774 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 60. | NW_001092346 | ACA | 6 | 126283 | 126300 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 61. | NW_001092346 | GAC | 8 | 126313 | 126336 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 62. | NW_001092346 | TGA | 4 | 143851 | 143862 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 63. | NW_001092346 | AGC | 4 | 153632 | 153643 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85092072 |