List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092328 | ATTA | 3 | 433 | 445 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092328 | TTAA | 3 | 558 | 570 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092328 | ATTA | 4 | 782 | 797 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092328 | GGCT | 3 | 2909 | 2920 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 85091140 |
| 5. | NW_001092328 | GGTA | 3 | 6376 | 6388 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 6. | NW_001092328 | TGCC | 4 | 9217 | 9232 | 16 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 7. | NW_001092328 | TGCA | 3 | 14129 | 14141 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 8. | NW_001092328 | CCCA | 3 | 14662 | 14673 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 9. | NW_001092328 | TTAT | 3 | 15274 | 15284 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | 85091148 |
| 10. | NW_001092328 | TGCT | 3 | 19175 | 19185 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85091152 |
| 11. | NW_001092328 | CTAC | 3 | 21144 | 21155 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 12. | NW_001092328 | GCAG | 5 | 29133 | 29153 | 21 | 25.00% | 0.00% | 50.00% | 25.00% | 85091158 |
| 13. | NW_001092328 | GCCC | 3 | 29670 | 29680 | 11 | 0.00% | 0.00% | 25.00% | 75.00% | 85091158 |
| 14. | NW_001092328 | CAAC | 3 | 30160 | 30172 | 13 | 50.00% | 0.00% | 0.00% | 50.00% | 85091158 |
| 15. | NW_001092328 | TGCA | 3 | 31800 | 31811 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 16. | NW_001092328 | TCAA | 3 | 32023 | 32033 | 11 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NW_001092328 | GGAG | 3 | 33042 | 33052 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | 85091160 |
| 18. | NW_001092328 | ACAA | 4 | 37022 | 37036 | 15 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 19. | NW_001092328 | GCTC | 3 | 40323 | 40333 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 20. | NW_001092328 | TCGG | 3 | 41372 | 41383 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 85091166 |
| 21. | NW_001092328 | ACGG | 3 | 41457 | 41467 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85091166 |
| 22. | NW_001092328 | GAAA | 3 | 42096 | 42107 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 23. | NW_001092328 | CCCA | 3 | 42307 | 42318 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 24. | NW_001092328 | GGCT | 3 | 43809 | 43820 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 85091168 |
| 25. | NW_001092328 | TGTT | 5 | 44815 | 44834 | 20 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 26. | NW_001092328 | GCGA | 3 | 45407 | 45417 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 85091170 |
| 27. | NW_001092328 | CCAT | 3 | 45447 | 45457 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 85091170 |
| 28. | NW_001092328 | GTGC | 3 | 46859 | 46869 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85091170 |
| 29. | NW_001092328 | CGAT | 3 | 47886 | 47897 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85091170 |
| 30. | NW_001092328 | GGTA | 3 | 49389 | 49400 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 31. | NW_001092328 | CCTA | 3 | 49410 | 49421 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 32. | NW_001092328 | GAAA | 3 | 51865 | 51876 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 33. | NW_001092328 | GTCT | 3 | 52729 | 52740 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NW_001092328 | TGCA | 3 | 55773 | 55784 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 35. | NW_001092328 | CAGC | 3 | 57747 | 57759 | 13 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 36. | NW_001092328 | AGGT | 5 | 59333 | 59353 | 21 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 37. | NW_001092328 | CTCC | 4 | 61345 | 61359 | 15 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 38. | NW_001092328 | GCCT | 3 | 65172 | 65183 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 85091178 |
| 39. | NW_001092328 | CTTT | 3 | 66702 | 66713 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 40. | NW_001092328 | GAGG | 4 | 67731 | 67746 | 16 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 41. | NW_001092328 | GGCT | 3 | 68343 | 68353 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |