List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092317 | ATC | 9 | 1902 | 1928 | 27 | 33.33% | 33.33% | 0.00% | 33.33% | 85090753 |
| 2. | NW_001092317 | GGA | 4 | 2382 | 2392 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85090753 |
| 3. | NW_001092317 | CTG | 4 | 2981 | 2992 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090753 |
| 4. | NW_001092317 | GAC | 5 | 3034 | 3048 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85090753 |
| 5. | NW_001092317 | CGA | 6 | 3066 | 3083 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85090753 |
| 6. | NW_001092317 | CAG | 6 | 3328 | 3345 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85090753 |
| 7. | NW_001092317 | GGC | 4 | 3577 | 3588 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85090753 |
| 8. | NW_001092317 | CGG | 4 | 3743 | 3754 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85090753 |
| 9. | NW_001092317 | GGA | 5 | 3858 | 3873 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | 85090753 |
| 10. | NW_001092317 | AGT | 7 | 3979 | 3999 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | 85090753 |
| 11. | NW_001092317 | TGG | 4 | 4044 | 4055 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090753 |
| 12. | NW_001092317 | GTA | 4 | 6152 | 6163 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85090755 |
| 13. | NW_001092317 | AGC | 4 | 6196 | 6207 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090755 |
| 14. | NW_001092317 | AGC | 4 | 6232 | 6243 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090755 |
| 15. | NW_001092317 | AGC | 5 | 6280 | 6294 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85090755 |
| 16. | NW_001092317 | TTG | 4 | 8030 | 8041 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85090755 |
| 17. | NW_001092317 | ACC | 4 | 8652 | 8663 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85090755 |
| 18. | NW_001092317 | AGC | 4 | 8685 | 8696 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85090755 |
| 19. | NW_001092317 | GAG | 4 | 9074 | 9085 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 20. | NW_001092317 | AAC | 4 | 9552 | 9563 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092317 | TCT | 4 | 9754 | 9765 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 22. | NW_001092317 | GGT | 4 | 11335 | 11346 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85090757 |
| 23. | NW_001092317 | AGA | 4 | 11843 | 11854 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090757 |
| 24. | NW_001092317 | GCC | 4 | 12254 | 12266 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85090757 |
| 25. | NW_001092317 | AGG | 4 | 13157 | 13168 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090757 |
| 26. | NW_001092317 | GCA | 4 | 13470 | 13482 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 27. | NW_001092317 | CAT | 4 | 18162 | 18173 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090761 |
| 28. | NW_001092317 | CTT | 4 | 18180 | 18191 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85090761 |
| 29. | NW_001092317 | TTC | 4 | 18262 | 18272 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | 85090761 |
| 30. | NW_001092317 | GCG | 4 | 19266 | 19276 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85090761 |
| 31. | NW_001092317 | AGA | 4 | 20962 | 20972 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 32. | NW_001092317 | CGG | 6 | 21591 | 21608 | 18 | 0.00% | 0.00% | 66.67% | 33.33% | Non-Coding |
| 33. | NW_001092317 | CGA | 4 | 22779 | 22790 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001092317 | TGG | 4 | 23428 | 23440 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85090763 |
| 35. | NW_001092317 | CAC | 4 | 23628 | 23638 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85090763 |
| 36. | NW_001092317 | GGT | 4 | 23964 | 23976 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 37. | NW_001092317 | GTC | 4 | 24943 | 24954 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 38. | NW_001092317 | TGT | 7 | 25404 | 25424 | 21 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 39. | NW_001092317 | ACC | 4 | 27140 | 27150 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | 85090765 |
| 40. | NW_001092317 | TGG | 4 | 28100 | 28110 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | 85090765 |
| 41. | NW_001092317 | CCT | 4 | 28212 | 28223 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85090765 |
| 42. | NW_001092317 | TGG | 5 | 28599 | 28613 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 85090765 |
| 43. | NW_001092317 | GCA | 12 | 29318 | 29354 | 37 | 33.33% | 0.00% | 33.33% | 33.33% | 85090765 |
| 44. | NW_001092317 | GAA | 4 | 29352 | 29363 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090765 |
| 45. | NW_001092317 | AAG | 4 | 33056 | 33067 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090769 |
| 46. | NW_001092317 | TCC | 4 | 34016 | 34027 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 47. | NW_001092317 | GAA | 12 | 34617 | 34652 | 36 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001092317 | CAC | 4 | 37884 | 37894 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 49. | NW_001092317 | AAG | 4 | 42582 | 42592 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 50. | NW_001092317 | CAC | 4 | 43547 | 43557 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 51. | NW_001092317 | AGA | 4 | 45098 | 45110 | 13 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 52. | NW_001092317 | CGG | 4 | 47559 | 47570 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85090773 |
| 53. | NW_001092317 | CGC | 4 | 47592 | 47602 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85090773 |
| 54. | NW_001092317 | ATC | 4 | 47777 | 47788 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85090773 |
| 55. | NW_001092317 | TTG | 4 | 49011 | 49022 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 56. | NW_001092317 | AGG | 10 | 49559 | 49589 | 31 | 33.33% | 0.00% | 66.67% | 0.00% | 85090775 |
| 57. | NW_001092317 | AGG | 4 | 55177 | 55188 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85090779 |
| 58. | NW_001092317 | TCT | 4 | 56191 | 56202 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 59. | NW_001092317 | TGT | 6 | 56397 | 56414 | 18 | 0.00% | 66.67% | 33.33% | 0.00% | 85090781 |
| 60. | NW_001092317 | AGA | 4 | 56903 | 56914 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85090781 |
| 61. | NW_001092317 | CAT | 5 | 60319 | 60332 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 62. | NW_001092317 | CAA | 4 | 62223 | 62234 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85090783 |
| 63. | NW_001092317 | GCT | 4 | 62614 | 62625 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85090783 |
| 64. | NW_001092317 | TGA | 5 | 63052 | 63066 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |