List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092299 | TTA | 4 | 896 | 907 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 2. | NW_001092299 | TAT | 4 | 2256 | 2266 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092299 | AGA | 4 | 2966 | 2976 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092299 | TGG | 4 | 3083 | 3094 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 5. | NW_001092299 | TAT | 4 | 3232 | 3242 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092299 | ATA | 5 | 5615 | 5629 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092299 | ATA | 6 | 5863 | 5880 | 18 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092299 | ATA | 4 | 6079 | 6089 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092299 | TAT | 4 | 6565 | 6575 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092299 | TTA | 4 | 6693 | 6703 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092299 | TAT | 4 | 8263 | 8273 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092299 | GAA | 4 | 8337 | 8347 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001092299 | TAT | 4 | 8994 | 9004 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092299 | GTA | 4 | 9217 | 9228 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092299 | ATA | 5 | 9721 | 9734 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092299 | ATT | 4 | 9939 | 9950 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092299 | TAA | 4 | 9953 | 9963 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092299 | AGA | 4 | 10229 | 10239 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 19. | NW_001092299 | AGA | 4 | 10535 | 10546 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092299 | TAC | 4 | 10673 | 10684 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NW_001092299 | TAT | 4 | 11220 | 11231 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092299 | TAT | 4 | 11561 | 11573 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001092299 | ATT | 4 | 11821 | 11832 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092299 | TTA | 7 | 11876 | 11894 | 19 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092299 | TAT | 4 | 12315 | 12327 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 26. | NW_001092299 | AAT | 4 | 12375 | 12386 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092299 | CTA | 4 | 12733 | 12744 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 28. | NW_001092299 | TTA | 4 | 12875 | 12886 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092299 | TAA | 4 | 15066 | 15077 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092299 | ATT | 5 | 15937 | 15952 | 16 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092299 | CTA | 4 | 16053 | 16064 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001092299 | TAT | 5 | 16477 | 16491 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001092299 | TAA | 5 | 18389 | 18403 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092299 | ATT | 4 | 18852 | 18862 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092299 | GTA | 4 | 20056 | 20067 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 36. | NW_001092299 | TCT | 4 | 20239 | 20249 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 37. | NW_001092299 | TTA | 5 | 20337 | 20351 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 38. | NW_001092299 | ACT | 4 | 21486 | 21496 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85090291 |
| 39. | NW_001092299 | TCC | 4 | 21860 | 21871 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 40. | NW_001092299 | ATT | 7 | 21943 | 21963 | 21 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092299 | CTA | 4 | 22681 | 22692 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001092299 | TTA | 4 | 22929 | 22940 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092299 | TCT | 4 | 23173 | 23184 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 44. | NW_001092299 | ACT | 5 | 25191 | 25204 | 14 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 45. | NW_001092299 | TTA | 4 | 25548 | 25560 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 46. | NW_001092299 | ATA | 4 | 25820 | 25831 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092299 | TAT | 5 | 26067 | 26081 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092299 | ATT | 4 | 26705 | 26715 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092299 | AAT | 4 | 26833 | 26844 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092299 | ATT | 4 | 28097 | 28108 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092299 | GGA | 4 | 28122 | 28133 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 52. | NW_001092299 | AGG | 4 | 29530 | 29541 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 53. | NW_001092299 | CCT | 4 | 29563 | 29573 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 54. | NW_001092299 | AAT | 4 | 30615 | 30626 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092299 | ATA | 5 | 30772 | 30785 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 56. | NW_001092299 | TTA | 4 | 30858 | 30869 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092299 | TAA | 5 | 31009 | 31023 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 58. | NW_001092299 | GTA | 4 | 31276 | 31286 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 59. | NW_001092299 | CCT | 5 | 31288 | 31302 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 60. | NW_001092299 | TAT | 4 | 31351 | 31362 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092299 | TAA | 4 | 32493 | 32504 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092299 | CTA | 4 | 32513 | 32524 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 63. | NW_001092299 | TAG | 4 | 32812 | 32824 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | 85090293 |
| 64. | NW_001092299 | TAA | 4 | 33054 | 33064 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | 85090293 |
| 65. | NW_001092299 | ATA | 4 | 33765 | 33777 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092299 | ATA | 4 | 35619 | 35629 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092299 | TAT | 4 | 36105 | 36115 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 68. | NW_001092299 | TAG | 4 | 37535 | 37546 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 69. | NW_001092299 | TTA | 4 | 37588 | 37599 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 70. | NW_001092299 | TCT | 4 | 38341 | 38351 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 71. | NW_001092299 | TAA | 4 | 38404 | 38415 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 72. | NW_001092299 | ACT | 4 | 38640 | 38650 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 73. | NW_001092299 | ATT | 4 | 38683 | 38693 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 74. | NW_001092299 | CTA | 4 | 39331 | 39341 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 75. | NW_001092299 | TCT | 4 | 40384 | 40394 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 76. | NW_001092299 | CTT | 4 | 40693 | 40704 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 77. | NW_001092299 | GTA | 4 | 41632 | 41643 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 78. | NW_001092299 | TTA | 4 | 41863 | 41874 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 79. | NW_001092299 | TAA | 4 | 42542 | 42553 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 80. | NW_001092299 | TAG | 4 | 43466 | 43477 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 81. | NW_001092299 | TAA | 4 | 43511 | 43522 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 82. | NW_001092299 | TCT | 4 | 44192 | 44202 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 83. | NW_001092299 | TAA | 4 | 44255 | 44266 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 84. | NW_001092299 | TAG | 4 | 44397 | 44408 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 85. | NW_001092299 | ATA | 4 | 45190 | 45201 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |