List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092298 | CTC | 21 | 53 | 115 | 63 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001092298 | TCG | 5 | 2282 | 2296 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 3. | NW_001092298 | TAG | 4 | 3015 | 3025 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001092298 | TAT | 5 | 3524 | 3539 | 16 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 5. | NW_001092298 | TTA | 4 | 3578 | 3590 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 6. | NW_001092298 | TAT | 5 | 3853 | 3866 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 7. | NW_001092298 | ATT | 4 | 4982 | 4993 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092298 | AGA | 4 | 5443 | 5453 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 9. | NW_001092298 | ATA | 4 | 5807 | 5817 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NW_001092298 | TTA | 4 | 6419 | 6430 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 11. | NW_001092298 | TTA | 4 | 6959 | 6970 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092298 | TCT | 4 | 7460 | 7470 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 13. | NW_001092298 | AAT | 5 | 7872 | 7886 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | 85090280 |
| 14. | NW_001092298 | AAG | 4 | 8180 | 8190 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 15. | NW_001092298 | ATT | 4 | 8272 | 8282 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092298 | TAC | 4 | 9285 | 9296 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 17. | NW_001092298 | ATT | 5 | 9629 | 9643 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 18. | NW_001092298 | ATA | 4 | 9693 | 9703 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092298 | ATT | 4 | 10384 | 10395 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 20. | NW_001092298 | TTA | 4 | 10550 | 10560 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092298 | TAA | 4 | 10883 | 10894 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092298 | ATT | 4 | 14102 | 14113 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001092298 | ATA | 4 | 14289 | 14300 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092298 | TAA | 5 | 14338 | 14352 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092298 | GTA | 4 | 15138 | 15149 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092298 | TAA | 4 | 16354 | 16365 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092298 | ATT | 4 | 16370 | 16382 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001092298 | TTA | 4 | 18439 | 18450 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092298 | TTA | 4 | 18598 | 18609 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092298 | TTA | 4 | 18700 | 18712 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092298 | ATA | 4 | 18909 | 18920 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092298 | GAA | 4 | 21675 | 21685 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 33. | NW_001092298 | TAA | 4 | 21942 | 21953 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 34. | NW_001092298 | TAA | 15 | 23958 | 24002 | 45 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 35. | NW_001092298 | TTA | 4 | 24099 | 24109 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092298 | ATT | 4 | 24242 | 24252 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092298 | TAC | 4 | 26041 | 26052 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092298 | TAC | 4 | 26426 | 26436 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 39. | NW_001092298 | TTA | 5 | 26520 | 26534 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092298 | ATA | 5 | 26857 | 26871 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092298 | TAA | 4 | 27076 | 27087 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092298 | TAA | 4 | 27789 | 27800 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 43. | NW_001092298 | TAA | 5 | 27824 | 27838 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092298 | TTA | 4 | 30588 | 30598 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001092298 | CTA | 4 | 31211 | 31221 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 46. | NW_001092298 | ATT | 5 | 31253 | 31266 | 14 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092298 | TAA | 4 | 31283 | 31295 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092298 | TAA | 4 | 31733 | 31744 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092298 | TAA | 4 | 32397 | 32407 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 50. | NW_001092298 | TAT | 4 | 32746 | 32756 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 51. | NW_001092298 | TAA | 4 | 33135 | 33146 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092298 | TAA | 4 | 33300 | 33310 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092298 | TAA | 4 | 33635 | 33645 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 54. | NW_001092298 | TAA | 4 | 34083 | 34094 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092298 | CTA | 4 | 34431 | 34441 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092298 | ATA | 4 | 34462 | 34473 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092298 | GTA | 4 | 34980 | 34992 | 13 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 58. | NW_001092298 | TAA | 4 | 35021 | 35032 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 59. | NW_001092298 | TTA | 4 | 35603 | 35614 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092298 | GTA | 4 | 36960 | 36971 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 61. | NW_001092298 | TCT | 4 | 37141 | 37151 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 62. | NW_001092298 | TAT | 4 | 38047 | 38058 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092298 | ATA | 4 | 38571 | 38582 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 64. | NW_001092298 | TAT | 4 | 38773 | 38783 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092298 | ATA | 4 | 39078 | 39090 | 13 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092298 | TAT | 4 | 39102 | 39113 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 67. | NW_001092298 | TAA | 4 | 39229 | 39240 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 68. | NW_001092298 | TTA | 4 | 39612 | 39623 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 69. | NW_001092298 | ATA | 4 | 39647 | 39657 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 70. | NW_001092298 | CTA | 4 | 40674 | 40684 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 71. | NW_001092298 | GTA | 4 | 41561 | 41572 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 72. | NW_001092298 | TAT | 7 | 42924 | 42944 | 21 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 73. | NW_001092298 | GTA | 4 | 43220 | 43231 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001092298 | ATT | 4 | 43288 | 43300 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 75. | NW_001092298 | TAT | 4 | 43593 | 43604 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 76. | NW_001092298 | ATT | 4 | 43624 | 43635 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 77. | NW_001092298 | TTA | 7 | 43732 | 43752 | 21 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 78. | NW_001092298 | TAA | 8 | 44506 | 44528 | 23 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 79. | NW_001092298 | ATA | 4 | 44909 | 44920 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |