List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092296 | TAC | 4 | 390 | 400 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 2. | NW_001092296 | TAT | 4 | 619 | 630 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 3. | NW_001092296 | TAT | 4 | 1275 | 1286 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 4. | NW_001092296 | GTA | 4 | 1332 | 1342 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 5. | NW_001092296 | AGC | 4 | 1736 | 1747 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 6. | NW_001092296 | AGA | 4 | 1896 | 1907 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 7. | NW_001092296 | TTA | 4 | 2062 | 2074 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 8. | NW_001092296 | TAA | 5 | 2140 | 2154 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 9. | NW_001092296 | TAG | 4 | 2520 | 2531 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 10. | NW_001092296 | GTA | 4 | 3304 | 3314 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 11. | NW_001092296 | TTA | 4 | 3373 | 3384 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 12. | NW_001092296 | TCG | 4 | 3775 | 3786 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 13. | NW_001092296 | TAA | 4 | 3879 | 3890 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 14. | NW_001092296 | TAT | 4 | 4022 | 4033 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 15. | NW_001092296 | TAA | 4 | 4516 | 4527 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 16. | NW_001092296 | TAA | 4 | 4795 | 4806 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 17. | NW_001092296 | TAC | 4 | 5866 | 5877 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 18. | NW_001092296 | TTA | 4 | 7599 | 7610 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 19. | NW_001092296 | TAG | 4 | 7783 | 7794 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 20. | NW_001092296 | AAT | 4 | 8187 | 8198 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 21. | NW_001092296 | TAA | 8 | 8975 | 8998 | 24 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 22. | NW_001092296 | TAA | 4 | 11750 | 11760 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 23. | NW_001092296 | ATT | 4 | 12808 | 12819 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 24. | NW_001092296 | ATT | 4 | 13695 | 13705 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 25. | NW_001092296 | TAG | 4 | 14828 | 14839 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 26. | NW_001092296 | ATA | 4 | 15015 | 15025 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 27. | NW_001092296 | TAT | 4 | 15079 | 15090 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 28. | NW_001092296 | ATT | 4 | 15905 | 15915 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 29. | NW_001092296 | TAT | 5 | 17155 | 17169 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 30. | NW_001092296 | ATA | 4 | 17898 | 17909 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 31. | NW_001092296 | TAT | 4 | 18231 | 18243 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 32. | NW_001092296 | AAT | 5 | 18346 | 18360 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 33. | NW_001092296 | TTC | 5 | 18981 | 18998 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 34. | NW_001092296 | TAC | 4 | 20081 | 20092 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 35. | NW_001092296 | TAT | 4 | 21739 | 21750 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 36. | NW_001092296 | AAT | 11 | 22024 | 22056 | 33 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 37. | NW_001092296 | CTA | 4 | 22276 | 22287 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 38. | NW_001092296 | TAT | 4 | 22584 | 22594 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 39. | NW_001092296 | TAA | 5 | 22733 | 22748 | 16 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 40. | NW_001092296 | ATT | 4 | 22819 | 22831 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 41. | NW_001092296 | ATA | 5 | 23316 | 23330 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 42. | NW_001092296 | TTG | 4 | 24727 | 24737 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 43. | NW_001092296 | ATA | 4 | 25938 | 25948 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 44. | NW_001092296 | TAT | 4 | 26286 | 26298 | 13 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 45. | NW_001092296 | TAC | 4 | 27288 | 27299 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 46. | NW_001092296 | TAA | 4 | 27856 | 27866 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 47. | NW_001092296 | TTA | 4 | 28190 | 28201 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 48. | NW_001092296 | TAA | 4 | 28749 | 28760 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 49. | NW_001092296 | ATA | 9 | 28763 | 28789 | 27 | 66.67% | 33.33% | 0.00% | 0.00% | 85090272 |
| 50. | NW_001092296 | AGA | 5 | 29206 | 29220 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 51. | NW_001092296 | TAA | 5 | 29674 | 29687 | 14 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 52. | NW_001092296 | TAA | 4 | 33130 | 33140 | 11 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 53. | NW_001092296 | TTC | 4 | 33324 | 33335 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 54. | NW_001092296 | TAA | 4 | 34798 | 34809 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NW_001092296 | TTC | 4 | 35480 | 35491 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 56. | NW_001092296 | TAT | 4 | 36467 | 36478 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 57. | NW_001092296 | ATA | 5 | 36786 | 36800 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 58. | NW_001092296 | TTC | 4 | 37312 | 37323 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 59. | NW_001092296 | TAT | 4 | 38152 | 38163 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 60. | NW_001092296 | TAA | 4 | 38221 | 38232 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 61. | NW_001092296 | TAA | 4 | 38967 | 38978 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 62. | NW_001092296 | TAT | 4 | 38984 | 38995 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 63. | NW_001092296 | TAC | 4 | 39001 | 39012 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 64. | NW_001092296 | TAA | 4 | 40026 | 40037 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 65. | NW_001092296 | TAT | 5 | 42053 | 42067 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 66. | NW_001092296 | GTA | 4 | 42214 | 42225 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |