List of
Imperfect Tetra
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001092016 | CCTA | 3 | 478 | 489 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NW_001092016 | GTTT | 3 | 2553 | 2564 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 3. | NW_001092016 | TTCC | 4 | 3357 | 3372 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | 85080952 |
| 4. | NW_001092016 | CCAA | 4 | 9326 | 9342 | 17 | 50.00% | 0.00% | 0.00% | 50.00% | 85080952 |
| 5. | NW_001092016 | GTAG | 3 | 12446 | 12457 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 6. | NW_001092016 | TGTC | 3 | 13596 | 13607 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 7. | NW_001092016 | AACG | 3 | 14037 | 14048 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 8. | NW_001092016 | GTAG | 3 | 14647 | 14658 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NW_001092016 | GCTT | 4 | 15144 | 15158 | 15 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 10. | NW_001092016 | CAGG | 3 | 17304 | 17315 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85080958 |
| 11. | NW_001092016 | GTCG | 3 | 17368 | 17378 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85080958 |
| 12. | NW_001092016 | ATTT | 3 | 19163 | 19174 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 13. | NW_001092016 | CTGG | 3 | 22892 | 22902 | 11 | 0.00% | 25.00% | 50.00% | 25.00% | 85080967 |
| 14. | NW_001092016 | AGGG | 3 | 24109 | 24120 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 85080967 |
| 15. | NW_001092016 | CCGG | 3 | 24653 | 24664 | 12 | 0.00% | 0.00% | 50.00% | 50.00% | 85080967 |
| 16. | NW_001092016 | ACTC | 3 | 25167 | 25178 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 85080967 |
| 17. | NW_001092016 | CTAC | 4 | 26081 | 26096 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 18. | NW_001092016 | GTAA | 3 | 27700 | 27711 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 19. | NW_001092016 | CCGA | 3 | 28696 | 28707 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 20. | NW_001092016 | CGTC | 3 | 29153 | 29164 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | Non-Coding |
| 21. | NW_001092016 | TGCT | 4 | 30393 | 30408 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 22. | NW_001092016 | TTTG | 3 | 40296 | 40307 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 23. | NW_001092016 | CCTT | 3 | 40747 | 40759 | 13 | 0.00% | 50.00% | 0.00% | 50.00% | 85080993 |
| 24. | NW_001092016 | ATGG | 6 | 41067 | 41089 | 23 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NW_001092016 | CCAT | 3 | 43724 | 43735 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 26. | NW_001092016 | CAGT | 3 | 46029 | 46040 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 27. | NW_001092016 | ACCC | 3 | 48383 | 48393 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | 85081010 |
| 28. | NW_001092016 | TGCT | 3 | 49373 | 49383 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 85081010 |
| 29. | NW_001092016 | GACC | 3 | 51992 | 52003 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 85081014 |
| 30. | NW_001092016 | CTCC | 6 | 54451 | 54474 | 24 | 0.00% | 25.00% | 0.00% | 75.00% | 85081018 |
| 31. | NW_001092016 | GTGG | 3 | 55024 | 55035 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | Non-Coding |
| 32. | NW_001092016 | TCCC | 3 | 55980 | 55991 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 33. | NW_001092016 | CCAG | 3 | 57261 | 57271 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 34. | NW_001092016 | CGTC | 3 | 57937 | 57948 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 85081027 |
| 35. | NW_001092016 | ACTG | 3 | 64282 | 64293 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 85081035 |
| 36. | NW_001092016 | GGAA | 3 | 65481 | 65492 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 85081035 |
| 37. | NW_001092016 | AACA | 4 | 67706 | 67721 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 38. | NW_001092016 | GCCA | 3 | 69840 | 69850 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85081038 |
| 39. | NW_001092016 | GAAA | 3 | 70108 | 70118 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 85081038 |
| 40. | NW_001092016 | GTAT | 3 | 72279 | 72290 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 41. | NW_001092016 | GCAA | 3 | 72444 | 72456 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 42. | NW_001092016 | CCAG | 3 | 74788 | 74798 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 85081042 |
| 43. | NW_001092016 | GGTT | 4 | 75338 | 75353 | 16 | 0.00% | 50.00% | 50.00% | 0.00% | Non-Coding |
| 44. | NW_001092016 | GACG | 6 | 75862 | 75885 | 24 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 45. | NW_001092016 | AGGG | 3 | 75953 | 75964 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 46. | NW_001092016 | CGAG | 3 | 77499 | 77510 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 85081046 |
| 47. | NW_001092016 | TTCC | 3 | 81845 | 81855 | 11 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 48. | NW_001092016 | GGAA | 3 | 82073 | 82084 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 49. | NW_001092016 | CTCC | 3 | 83159 | 83170 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | Non-Coding |
| 50. | NW_001092016 | ACTA | 3 | 95331 | 95343 | 13 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 51. | NW_001092016 | AATT | 3 | 96067 | 96077 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |