List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001091995 | CGG | 4 | 6063 | 6074 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85078436 |
| 2. | NW_001091995 | AAC | 4 | 11723 | 11734 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85078436 |
| 3. | NW_001091995 | TTG | 4 | 12866 | 12876 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 4. | NW_001091995 | AGC | 4 | 13346 | 13356 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85078440 |
| 5. | NW_001091995 | CGG | 4 | 13424 | 13435 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85078440 |
| 6. | NW_001091995 | TCA | 4 | 16533 | 16544 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85078440 |
| 7. | NW_001091995 | TTG | 4 | 18609 | 18620 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 8. | NW_001091995 | TTC | 7 | 20475 | 20496 | 22 | 0.00% | 66.67% | 0.00% | 33.33% | 85078449 |
| 9. | NW_001091995 | TCT | 4 | 20785 | 20796 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85078449 |
| 10. | NW_001091995 | AGC | 7 | 20946 | 20966 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85078449 |
| 11. | NW_001091995 | TCA | 4 | 20981 | 20992 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85078449 |
| 12. | NW_001091995 | CTG | 5 | 24690 | 24704 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 13. | NW_001091995 | GCA | 4 | 25062 | 25072 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 14. | NW_001091995 | CAC | 11 | 25096 | 25128 | 33 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 15. | NW_001091995 | CAG | 9 | 25673 | 25699 | 27 | 33.33% | 0.00% | 33.33% | 33.33% | 85078461 |
| 16. | NW_001091995 | CAG | 8 | 26393 | 26416 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 85078461 |
| 17. | NW_001091995 | GAG | 4 | 29464 | 29476 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 85078465 |
| 18. | NW_001091995 | CAG | 4 | 29495 | 29506 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85078465 |
| 19. | NW_001091995 | GAG | 4 | 29509 | 29519 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85078465 |
| 20. | NW_001091995 | CAT | 4 | 30810 | 30821 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85078470 |
| 21. | NW_001091995 | TGA | 4 | 31502 | 31512 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85078470 |
| 22. | NW_001091995 | CAG | 4 | 33644 | 33656 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 85078470 |
| 23. | NW_001091995 | CAT | 4 | 34200 | 34210 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 85078470 |
| 24. | NW_001091995 | CGG | 4 | 34705 | 34716 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85078470 |
| 25. | NW_001091995 | CTG | 5 | 38112 | 38125 | 14 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 26. | NW_001091995 | AGG | 4 | 38999 | 39010 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85078476 |
| 27. | NW_001091995 | AGA | 5 | 40118 | 40131 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 28. | NW_001091995 | CTC | 6 | 40224 | 40245 | 22 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 29. | NW_001091995 | TGG | 4 | 40529 | 40539 | 11 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 30. | NW_001091995 | GAA | 4 | 40826 | 40837 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 31. | NW_001091995 | TTG | 4 | 41019 | 41029 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | 85078480 |
| 32. | NW_001091995 | TCC | 4 | 41110 | 41121 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85078480 |
| 33. | NW_001091995 | CGA | 4 | 42938 | 42949 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 34. | NW_001091995 | TGG | 4 | 43074 | 43085 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 35. | NW_001091995 | GGT | 4 | 43084 | 43095 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 36. | NW_001091995 | TCC | 4 | 46178 | 46188 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85078489 |
| 37. | NW_001091995 | CCT | 4 | 47238 | 47249 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85078489 |
| 38. | NW_001091995 | CTC | 4 | 48721 | 48732 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85078489 |
| 39. | NW_001091995 | CGC | 4 | 48786 | 48798 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85078489 |
| 40. | NW_001091995 | GTT | 4 | 50339 | 50350 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 41. | NW_001091995 | ATC | 4 | 52143 | 52154 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001091995 | CAA | 7 | 52641 | 52661 | 21 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 43. | NW_001091995 | GTT | 4 | 56034 | 56044 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 44. | NW_001091995 | GAG | 4 | 56621 | 56632 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 45. | NW_001091995 | CAC | 4 | 56686 | 56697 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 46. | NW_001091995 | CCA | 4 | 56717 | 56728 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 47. | NW_001091995 | GCC | 4 | 57117 | 57129 | 13 | 0.00% | 0.00% | 33.33% | 66.67% | 85078501 |
| 48. | NW_001091995 | GTG | 4 | 60916 | 60927 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85078501 |
| 49. | NW_001091995 | ATG | 4 | 61328 | 61338 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85078501 |