List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001091985 | ACG | 4 | 424 | 435 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 2. | NW_001091985 | CGA | 4 | 618 | 629 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85077353 |
| 3. | NW_001091985 | CAA | 4 | 707 | 719 | 13 | 66.67% | 0.00% | 0.00% | 33.33% | 85077353 |
| 4. | NW_001091985 | CCG | 4 | 848 | 858 | 11 | 0.00% | 0.00% | 33.33% | 66.67% | 85077353 |
| 5. | NW_001091985 | AGA | 4 | 1586 | 1597 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85077353 |
| 6. | NW_001091985 | GGA | 4 | 3061 | 3072 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85077353 |
| 7. | NW_001091985 | CAG | 5 | 3090 | 3104 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85077353 |
| 8. | NW_001091985 | GGA | 7 | 3463 | 3483 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 9. | NW_001091985 | GAG | 5 | 3491 | 3505 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 10. | NW_001091985 | GTG | 7 | 3500 | 3521 | 22 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 11. | NW_001091985 | GCA | 7 | 3576 | 3596 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 12. | NW_001091985 | AGA | 5 | 4310 | 4324 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 13. | NW_001091985 | CTC | 4 | 4367 | 4378 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 14. | NW_001091985 | ACC | 4 | 4503 | 4514 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85077357 |
| 15. | NW_001091985 | ACC | 4 | 4521 | 4532 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85077357 |
| 16. | NW_001091985 | GCA | 4 | 4659 | 4670 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85077357 |
| 17. | NW_001091985 | GTT | 4 | 4820 | 4831 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85077357 |
| 18. | NW_001091985 | GAT | 5 | 4823 | 4843 | 21 | 33.33% | 33.33% | 33.33% | 0.00% | 85077357 |
| 19. | NW_001091985 | CAA | 4 | 5932 | 5942 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | 85077357 |
| 20. | NW_001091985 | CGA | 5 | 6018 | 6032 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85077357 |
| 21. | NW_001091985 | GCG | 4 | 6937 | 6948 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85077357 |
| 22. | NW_001091985 | AGA | 7 | 7288 | 7308 | 21 | 66.67% | 0.00% | 33.33% | 0.00% | 85077357 |
| 23. | NW_001091985 | CAA | 5 | 8310 | 8323 | 14 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 24. | NW_001091985 | CAC | 4 | 8371 | 8381 | 11 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 25. | NW_001091985 | CAA | 4 | 8382 | 8392 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 26. | NW_001091985 | CTT | 4 | 8447 | 8458 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 27. | NW_001091985 | TCG | 7 | 9272 | 9292 | 21 | 0.00% | 33.33% | 33.33% | 33.33% | 85077361 |
| 28. | NW_001091985 | GCC | 5 | 9310 | 9324 | 15 | 0.00% | 0.00% | 33.33% | 66.67% | 85077361 |
| 29. | NW_001091985 | TGA | 4 | 9478 | 9488 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85077361 |
| 30. | NW_001091985 | TGG | 4 | 9628 | 9639 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 85077361 |
| 31. | NW_001091985 | GAG | 4 | 10658 | 10668 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 85077361 |
| 32. | NW_001091985 | TTC | 4 | 10846 | 10857 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 85077361 |
| 33. | NW_001091985 | TCG | 4 | 11723 | 11734 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85077361 |
| 34. | NW_001091985 | GGA | 4 | 12025 | 12036 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 85077361 |
| 35. | NW_001091985 | GGC | 4 | 12082 | 12093 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85077361 |
| 36. | NW_001091985 | CTC | 4 | 12239 | 12249 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 85077361 |
| 37. | NW_001091985 | GCT | 4 | 12303 | 12314 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85077361 |
| 38. | NW_001091985 | TAG | 4 | 13076 | 13086 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 85077361 |
| 39. | NW_001091985 | TTG | 5 | 13159 | 13173 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85077361 |
| 40. | NW_001091985 | TGG | 4 | 13914 | 13925 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 41. | NW_001091985 | CAT | 5 | 14924 | 14939 | 16 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 42. | NW_001091985 | CTC | 4 | 15069 | 15083 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 85077369 |
| 43. | NW_001091985 | CGA | 4 | 17717 | 17728 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85077369 |
| 44. | NW_001091985 | TGG | 5 | 18376 | 18390 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 45. | NW_001091985 | TGG | 4 | 18706 | 18717 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 46. | NW_001091985 | ACG | 5 | 20049 | 20063 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85077373 |
| 47. | NW_001091985 | ATG | 4 | 21697 | 21708 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001091985 | AGC | 4 | 23025 | 23036 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 49. | NW_001091985 | TCG | 4 | 23157 | 23168 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85077542 |
| 50. | NW_001091985 | GTT | 5 | 23765 | 23779 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85077542 |
| 51. | NW_001091985 | AGG | 4 | 25356 | 25366 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 52. | NW_001091985 | ATC | 4 | 26855 | 26867 | 13 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 53. | NW_001091985 | CGT | 5 | 27590 | 27604 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85077546 |
| 54. | NW_001091985 | CCT | 4 | 27665 | 27676 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85077546 |
| 55. | NW_001091985 | CAC | 5 | 27860 | 27874 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 85077546 |
| 56. | NW_001091985 | CTC | 4 | 28458 | 28470 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 85077546 |
| 57. | NW_001091985 | CTC | 4 | 29013 | 29024 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85077546 |
| 58. | NW_001091985 | TCT | 5 | 29366 | 29380 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85077546 |
| 59. | NW_001091985 | CCG | 8 | 33118 | 33141 | 24 | 0.00% | 0.00% | 33.33% | 66.67% | 85077546 |
| 60. | NW_001091985 | CGA | 4 | 33771 | 33782 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85077546 |
| 61. | NW_001091985 | TCT | 4 | 35350 | 35360 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 62. | NW_001091985 | GTA | 4 | 35522 | 35533 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 63. | NW_001091985 | TGT | 4 | 35931 | 35942 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 64. | NW_001091985 | CAT | 4 | 37503 | 37513 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 65. | NW_001091985 | CAT | 4 | 39222 | 39233 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 66. | NW_001091985 | TCT | 4 | 40648 | 40659 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 67. | NW_001091985 | GTG | 5 | 42091 | 42105 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 68. | NW_001091985 | TCG | 4 | 43363 | 43375 | 13 | 0.00% | 33.33% | 33.33% | 33.33% | 85077558 |
| 69. | NW_001091985 | CCG | 4 | 43481 | 43492 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85077558 |
| 70. | NW_001091985 | GGA | 7 | 43619 | 43639 | 21 | 33.33% | 0.00% | 66.67% | 0.00% | 85077558 |
| 71. | NW_001091985 | CAA | 4 | 44632 | 44643 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 72. | NW_001091985 | GTG | 4 | 45805 | 45816 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 73. | NW_001091985 | GAT | 4 | 45818 | 45829 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 74. | NW_001091985 | ATT | 4 | 46656 | 46667 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 75. | NW_001091985 | TAT | 4 | 47371 | 47381 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 76. | NW_001091985 | ATT | 4 | 48305 | 48315 | 11 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |