List of
Imperfect Tri
-nucleotide repeats in Neurospora crassa OR74A
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NW_001091965 | CCT | 4 | 985 | 996 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 2. | NW_001091965 | ACC | 7 | 1580 | 1600 | 21 | 33.33% | 0.00% | 0.00% | 66.67% | 85075863 |
| 3. | NW_001091965 | AGC | 7 | 1598 | 1618 | 21 | 33.33% | 0.00% | 33.33% | 33.33% | 85075863 |
| 4. | NW_001091965 | CAG | 5 | 1822 | 1836 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 85075863 |
| 5. | NW_001091965 | CTT | 7 | 1921 | 1941 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 85075863 |
| 6. | NW_001091965 | TGA | 4 | 2144 | 2155 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85075863 |
| 7. | NW_001091965 | CCA | 4 | 2413 | 2424 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85075863 |
| 8. | NW_001091965 | CGG | 4 | 2639 | 2649 | 11 | 0.00% | 0.00% | 66.67% | 33.33% | 85075863 |
| 9. | NW_001091965 | TCT | 5 | 2715 | 2729 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85075863 |
| 10. | NW_001091965 | AAG | 4 | 2977 | 2988 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85075863 |
| 11. | NW_001091965 | CGC | 4 | 4085 | 4096 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 85075867 |
| 12. | NW_001091965 | CTT | 5 | 4283 | 4297 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 85075867 |
| 13. | NW_001091965 | GTT | 4 | 4585 | 4596 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85075867 |
| 14. | NW_001091965 | GTT | 4 | 4607 | 4618 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 85075867 |
| 15. | NW_001091965 | GGA | 5 | 4622 | 4637 | 16 | 33.33% | 0.00% | 66.67% | 0.00% | 85075867 |
| 16. | NW_001091965 | TCA | 4 | 4647 | 4658 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85075867 |
| 17. | NW_001091965 | GGC | 4 | 4670 | 4681 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 85075867 |
| 18. | NW_001091965 | GAC | 4 | 4707 | 4718 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85075867 |
| 19. | NW_001091965 | CAC | 5 | 6014 | 6028 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 20. | NW_001091965 | CAG | 4 | 6539 | 6550 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85075871 |
| 21. | NW_001091965 | CTC | 4 | 7680 | 7691 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85075871 |
| 22. | NW_001091965 | CTC | 11 | 7877 | 7910 | 34 | 0.00% | 33.33% | 0.00% | 66.67% | 85075871 |
| 23. | NW_001091965 | CTG | 4 | 8381 | 8392 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 85075871 |
| 24. | NW_001091965 | GTG | 4 | 8605 | 8617 | 13 | 0.00% | 33.33% | 66.67% | 0.00% | 85075871 |
| 25. | NW_001091965 | ATA | 5 | 8678 | 8692 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 26. | NW_001091965 | CTC | 4 | 8771 | 8782 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | Non-Coding |
| 27. | NW_001091965 | GCA | 4 | 9042 | 9053 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 28. | NW_001091965 | GTT | 5 | 11597 | 11611 | 15 | 0.00% | 66.67% | 33.33% | 0.00% | 85075875 |
| 29. | NW_001091965 | AGA | 5 | 12537 | 12550 | 14 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 30. | NW_001091965 | CAC | 4 | 19888 | 19899 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 31. | NW_001091965 | CAA | 4 | 19902 | 19912 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 32. | NW_001091965 | TCA | 5 | 19999 | 20013 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 33. | NW_001091965 | ACC | 4 | 20113 | 20124 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 85075887 |
| 34. | NW_001091965 | GAA | 4 | 20335 | 20346 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85075887 |
| 35. | NW_001091965 | CAG | 17 | 20995 | 21045 | 51 | 33.33% | 0.00% | 33.33% | 33.33% | 85075887 |
| 36. | NW_001091965 | CAG | 4 | 21265 | 21276 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 85075887 |
| 37. | NW_001091965 | CTC | 4 | 21314 | 21325 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 85075887 |
| 38. | NW_001091965 | ACA | 4 | 21336 | 21347 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85075887 |
| 39. | NW_001091965 | ACA | 4 | 21360 | 21371 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85075887 |
| 40. | NW_001091965 | CAA | 4 | 21373 | 21384 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 85075887 |
| 41. | NW_001091965 | CAA | 12 | 21385 | 21420 | 36 | 66.67% | 0.00% | 0.00% | 33.33% | 85075887 |
| 42. | NW_001091965 | GCA | 6 | 21465 | 21482 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 85075887 |
| 43. | NW_001091965 | AGT | 4 | 21577 | 21588 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 85075887 |
| 44. | NW_001091965 | CTA | 4 | 21617 | 21628 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 85075887 |
| 45. | NW_001091965 | CTG | 5 | 21626 | 21640 | 15 | 0.00% | 33.33% | 33.33% | 33.33% | 85075887 |
| 46. | NW_001091965 | TGG | 6 | 21702 | 21719 | 18 | 0.00% | 33.33% | 66.67% | 0.00% | 85075887 |
| 47. | NW_001091965 | ATG | 5 | 21790 | 21804 | 15 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 48. | NW_001091965 | AGA | 4 | 23481 | 23492 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 85075891 |
| 49. | NW_001091965 | CGA | 4 | 26070 | 26080 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 85075896 |