List of
Perfect Penta
-nucleotide repeats in Gibberella zeae PH-1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_086559 | ATCGT | 3 | 18205 | 18219 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 46136697 |
| 2. | NT_086559 | ATCTC | 4 | 64146 | 64165 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 3. | NT_086559 | GCTTG | 4 | 75606 | 75625 | 20 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 4. | NT_086559 | GCTCA | 3 | 75626 | 75640 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 5. | NT_086559 | ACCAC | 3 | 89218 | 89232 | 15 | 40.00% | 0.00% | 0.00% | 60.00% | Non-Coding |
| 6. | NT_086559 | TTGCA | 4 | 91934 | 91953 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 7. | NT_086559 | TTTGC | 3 | 172619 | 172633 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 8. | NT_086559 | TTGCC | 3 | 242180 | 242194 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | 46136845 |
| 9. | NT_086559 | GTCCT | 5 | 251685 | 251709 | 25 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 10. | NT_086559 | ATTCA | 3 | 268308 | 268322 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 11. | NT_086559 | TTCGT | 3 | 274399 | 274413 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 46136855 |
| 12. | NT_086559 | GCGGA | 3 | 301183 | 301197 | 15 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 13. | NT_086559 | CATCC | 4 | 334297 | 334316 | 20 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 14. | NT_086559 | GGGCA | 3 | 350080 | 350094 | 15 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 15. | NT_086559 | ACCCT | 3 | 356107 | 356121 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 16. | NT_086559 | TATCC | 5 | 376419 | 376443 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 17. | NT_086559 | TGTGT | 3 | 384942 | 384956 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 18. | NT_086559 | TTCAA | 3 | 386998 | 387012 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NT_086559 | GCCTC | 3 | 404427 | 404441 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | 46136941 |
| 20. | NT_086559 | TATCC | 3 | 410718 | 410732 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 21. | NT_086559 | ATTGC | 3 | 413074 | 413088 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 22. | NT_086559 | GTGCA | 3 | 416874 | 416888 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 23. | NT_086559 | TGCGA | 3 | 420240 | 420254 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 24. | NT_086559 | GTACG | 3 | 420507 | 420521 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 25. | NT_086559 | AAACA | 4 | 423718 | 423737 | 20 | 80.00% | 0.00% | 0.00% | 20.00% | 46136951 |
| 26. | NT_086559 | CAAGC | 3 | 435799 | 435813 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 27. | NT_086559 | GGACT | 4 | 436940 | 436959 | 20 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 28. | NT_086559 | ATGGG | 3 | 438770 | 438784 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 29. | NT_086559 | GTGCA | 3 | 439370 | 439384 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 30. | NT_086559 | CCGTA | 3 | 439426 | 439440 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 31. | NT_086559 | ATCGA | 4 | 445088 | 445107 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 32. | NT_086559 | CACTT | 3 | 456744 | 456758 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 33. | NT_086559 | GTCTC | 3 | 503323 | 503337 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 34. | NT_086559 | GGCAG | 3 | 510948 | 510962 | 15 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 35. | NT_086559 | CCGTG | 3 | 537100 | 537114 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | Non-Coding |
| 36. | NT_086559 | CGCAC | 3 | 694685 | 694699 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 37. | NT_086559 | AAAGG | 3 | 696490 | 696504 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 38. | NT_086559 | CAGCC | 3 | 702103 | 702117 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | 46137085 |
| 39. | NT_086559 | TGATC | 4 | 728273 | 728292 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 40. | NT_086559 | TTTGA | 3 | 745506 | 745520 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 41. | NT_086559 | CTTTG | 3 | 754955 | 754969 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 42. | NT_086559 | ACTAC | 3 | 803699 | 803713 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | 46137145 |
| 43. | NT_086559 | CAGCT | 3 | 938468 | 938482 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 44. | NT_086559 | CCCTG | 3 | 945263 | 945277 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | 46137225 |
| 45. | NT_086559 | ACTGT | 4 | 949014 | 949033 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 46. | NT_086559 | ATCGC | 3 | 976211 | 976225 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 46137243 |
| 47. | NT_086559 | CCAGC | 3 | 1069538 | 1069552 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 48. | NT_086559 | GAAGA | 3 | 1075557 | 1075571 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 49. | NT_086559 | GAGTC | 3 | 1078865 | 1078879 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 50. | NT_086559 | CTTCA | 3 | 1080727 | 1080741 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 51. | NT_086559 | TACAC | 3 | 1130804 | 1130818 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 52. | NT_086559 | GGTAC | 3 | 1140200 | 1140214 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 53. | NT_086559 | TTGGA | 3 | 1150769 | 1150783 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 54. | NT_086559 | TTGCA | 3 | 1181930 | 1181944 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 55. | NT_086559 | GAACT | 3 | 1183400 | 1183414 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 56. | NT_086559 | ATAAA | 3 | 1203126 | 1203140 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NT_086559 | ACATC | 4 | 1229945 | 1229964 | 20 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 58. | NT_086559 | ACTTT | 3 | 1246550 | 1246564 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 59. | NT_086559 | ACTCT | 3 | 1278299 | 1278313 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 60. | NT_086559 | GGTTG | 3 | 1302405 | 1302419 | 15 | 0.00% | 40.00% | 60.00% | 0.00% | Non-Coding |
| 61. | NT_086559 | AAGCG | 5 | 1327807 | 1327831 | 25 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 62. | NT_086559 | AAGGA | 3 | 1341391 | 1341405 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 63. | NT_086559 | ATGTA | 3 | 1389849 | 1389863 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 64. | NT_086559 | GTCGA | 4 | 1399266 | 1399285 | 20 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 65. | NT_086559 | GATGT | 3 | 1414287 | 1414301 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 66. | NT_086559 | TCAGC | 3 | 1456986 | 1457000 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 67. | NT_086559 | CGCAT | 3 | 1466732 | 1466746 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 68. | NT_086559 | CTGGT | 3 | 1493894 | 1493908 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 69. | NT_086559 | TAGAT | 3 | 1499855 | 1499869 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 70. | NT_086559 | ATCTT | 3 | 1574593 | 1574607 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 71. | NT_086559 | CGAAT | 3 | 1591090 | 1591104 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 72. | NT_086559 | CGATG | 3 | 1599095 | 1599109 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 73. | NT_086559 | CAATT | 3 | 1618591 | 1618605 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 74. | NT_086559 | TGACA | 3 | 1620201 | 1620215 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 75. | NT_086559 | ATGGG | 3 | 1632048 | 1632062 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 76. | NT_086559 | ATGCG | 3 | 1636822 | 1636836 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 77. | NT_086559 | GCAAT | 3 | 1637664 | 1637678 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 78. | NT_086559 | CGACT | 3 | 1655920 | 1655934 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 46137689 |
| 79. | NT_086559 | GCAAC | 3 | 1692347 | 1692361 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 80. | NT_086559 | GTATC | 3 | 1692639 | 1692653 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 81. | NT_086559 | AGGCA | 4 | 1692721 | 1692740 | 20 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 82. | NT_086559 | TCTGT | 3 | 1693961 | 1693975 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 83. | NT_086559 | GCACA | 3 | 1715000 | 1715014 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 84. | NT_086559 | CAAGC | 3 | 1724854 | 1724868 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 85. | NT_086559 | GGATG | 5 | 1740368 | 1740392 | 25 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 86. | NT_086559 | CGCAT | 5 | 1787843 | 1787867 | 25 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 87. | NT_086559 | CTCAT | 3 | 1881825 | 1881839 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 46137845 |
| 88. | NT_086559 | TTTGC | 5 | 1890711 | 1890735 | 25 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 89. | NT_086559 | CGCCA | 3 | 1953947 | 1953961 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 90. | NT_086559 | ATGAG | 3 | 2023546 | 2023560 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 91. | NT_086559 | CTCAG | 3 | 2025931 | 2025945 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 92. | NT_086559 | TGGGC | 3 | 2029219 | 2029233 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 93. | NT_086559 | GCCCA | 3 | 2064030 | 2064044 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 94. | NT_086559 | TTGGT | 3 | 2085356 | 2085370 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 95. | NT_086559 | CTTCC | 3 | 2100051 | 2100065 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 96. | NT_086559 | AGAAC | 3 | 2100067 | 2100081 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 97. | NT_086559 | GATGT | 3 | 2125735 | 2125749 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 98. | NT_086559 | TGTCT | 3 | 2127154 | 2127168 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 99. | NT_086559 | TTAGC | 3 | 2127363 | 2127377 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 100. | NT_086559 | TCAGT | 3 | 2129261 | 2129275 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 101. | NT_086559 | GACAG | 3 | 2147616 | 2147630 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 102. | NT_086559 | GACTC | 3 | 2147954 | 2147968 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 103. | NT_086559 | TAAGA | 3 | 2443626 | 2443640 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 104. | NT_086559 | GTTGT | 3 | 2532963 | 2532977 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 105. | NT_086559 | TATCT | 3 | 2533878 | 2533892 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |