List of
Perfect Penta
-nucleotide repeats in Gibberella zeae PH-1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_086557 | AGTTG | 3 | 60158 | 60172 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 2. | NT_086557 | AGATG | 3 | 353706 | 353720 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 46127443 |
| 3. | NT_086557 | ATCTC | 3 | 420612 | 420626 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 4. | NT_086557 | AGTCA | 3 | 424070 | 424084 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 5. | NT_086557 | TTTTG | 3 | 544043 | 544057 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 6. | NT_086557 | GACGC | 3 | 635187 | 635201 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 7. | NT_086557 | AAAAG | 3 | 885310 | 885324 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 8. | NT_086557 | ATCTC | 3 | 906798 | 906812 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 9. | NT_086557 | TGATC | 3 | 925903 | 925917 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 10. | NT_086557 | CTAAT | 3 | 940647 | 940661 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 11. | NT_086557 | AAAAG | 3 | 941279 | 941293 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 12. | NT_086557 | TCTGT | 3 | 970409 | 970423 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 13. | NT_086557 | AATGC | 3 | 1040943 | 1040957 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 14. | NT_086557 | TTGCC | 3 | 1055133 | 1055147 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 15. | NT_086557 | CTCGA | 3 | 1061664 | 1061678 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 16. | NT_086557 | AAGTC | 3 | 1075004 | 1075018 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | 46127901 |
| 17. | NT_086557 | GGGCT | 3 | 1093713 | 1093727 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 18. | NT_086557 | TGGGT | 3 | 1107103 | 1107117 | 15 | 0.00% | 40.00% | 60.00% | 0.00% | Non-Coding |
| 19. | NT_086557 | CAGCG | 3 | 1132994 | 1133008 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 20. | NT_086557 | TCGTC | 3 | 1159435 | 1159449 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 21. | NT_086557 | AGAAA | 3 | 1193191 | 1193205 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 22. | NT_086557 | CACGA | 4 | 1236215 | 1236234 | 20 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 23. | NT_086557 | CGATA | 3 | 1297178 | 1297192 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 24. | NT_086557 | TCATA | 3 | 1297409 | 1297423 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 25. | NT_086557 | CTTTT | 3 | 1345898 | 1345912 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 26. | NT_086557 | ATGAC | 3 | 1386701 | 1386715 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 27. | NT_086557 | CTCTC | 3 | 1403397 | 1403411 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 28. | NT_086557 | TCCTC | 3 | 1403848 | 1403862 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 29. | NT_086557 | AGCAA | 3 | 1486726 | 1486740 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 30. | NT_086557 | ACACC | 3 | 1487453 | 1487467 | 15 | 40.00% | 0.00% | 0.00% | 60.00% | Non-Coding |
| 31. | NT_086557 | GTCAG | 3 | 1496219 | 1496233 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 32. | NT_086557 | CCAGG | 3 | 1497698 | 1497712 | 15 | 20.00% | 0.00% | 40.00% | 40.00% | Non-Coding |
| 33. | NT_086557 | ATCTC | 3 | 1500458 | 1500472 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 34. | NT_086557 | AAGAG | 3 | 1500762 | 1500776 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 35. | NT_086557 | GCCTC | 3 | 1504720 | 1504734 | 15 | 0.00% | 20.00% | 20.00% | 60.00% | Non-Coding |
| 36. | NT_086557 | GAAAG | 3 | 1532443 | 1532457 | 15 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 37. | NT_086557 | AATCA | 3 | 1550642 | 1550656 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 38. | NT_086557 | GTTGA | 3 | 1584682 | 1584696 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 39. | NT_086557 | AGCTG | 3 | 1629509 | 1629523 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 40. | NT_086557 | CTGGT | 3 | 1641400 | 1641414 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 41. | NT_086557 | GATAT | 3 | 1660210 | 1660224 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 42. | NT_086557 | TACAG | 4 | 1660976 | 1660995 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 43. | NT_086557 | CAGGT | 3 | 1716942 | 1716956 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 44. | NT_086557 | AGTGA | 3 | 1736548 | 1736562 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 45. | NT_086557 | GTGCC | 3 | 1805012 | 1805026 | 15 | 0.00% | 20.00% | 40.00% | 40.00% | Non-Coding |
| 46. | NT_086557 | ATCGC | 3 | 1812772 | 1812786 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 47. | NT_086557 | GACAG | 3 | 1829374 | 1829388 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 48. | NT_086557 | GTCAT | 3 | 1889853 | 1889867 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 49. | NT_086557 | GCAAT | 3 | 1889868 | 1889882 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 50. | NT_086557 | TCTCA | 3 | 1889985 | 1889999 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 51. | NT_086557 | CGAGA | 5 | 1898695 | 1898719 | 25 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 52. | NT_086557 | CAAGT | 3 | 1941661 | 1941675 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | 46128423 |
| 53. | NT_086557 | CGCAC | 3 | 1967815 | 1967829 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 54. | NT_086557 | AGGCA | 3 | 1989351 | 1989365 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | 46128445 |
| 55. | NT_086557 | TTTCT | 3 | 2037932 | 2037946 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 56. | NT_086557 | GCAAA | 3 | 2049063 | 2049077 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 57. | NT_086557 | GTGAC | 3 | 2063883 | 2063897 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 58. | NT_086557 | GAGTT | 3 | 2070324 | 2070338 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 59. | NT_086557 | CGATG | 3 | 2089530 | 2089544 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 60. | NT_086557 | AAACC | 3 | 2093004 | 2093018 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 61. | NT_086557 | CTCGA | 3 | 2105702 | 2105716 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 62. | NT_086557 | CAGAC | 4 | 2118292 | 2118311 | 20 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 63. | NT_086557 | CCTTG | 3 | 2119742 | 2119756 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 64. | NT_086557 | CTGCA | 3 | 2119790 | 2119804 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 65. | NT_086557 | GGGAT | 3 | 2134936 | 2134950 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 66. | NT_086557 | GACTG | 3 | 2204865 | 2204879 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 67. | NT_086557 | CAAGA | 3 | 2205100 | 2205114 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 68. | NT_086557 | TGTGA | 3 | 2205794 | 2205808 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 69. | NT_086557 | TGCTG | 3 | 2301846 | 2301860 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | 46128631 |
| 70. | NT_086557 | AAACC | 3 | 2307792 | 2307806 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 71. | NT_086557 | ACTGC | 4 | 2330612 | 2330631 | 20 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 72. | NT_086557 | CAGTA | 3 | 2332183 | 2332197 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 73. | NT_086557 | TCTGC | 3 | 2372082 | 2372096 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 74. | NT_086557 | ACTTG | 3 | 2437316 | 2437330 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 46128693 |
| 75. | NT_086557 | TCAGT | 3 | 2445364 | 2445378 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 76. | NT_086557 | TTTAG | 4 | 2479200 | 2479219 | 20 | 20.00% | 60.00% | 20.00% | 0.00% | 46128713 |
| 77. | NT_086557 | GGGGA | 3 | 2481327 | 2481341 | 15 | 20.00% | 0.00% | 80.00% | 0.00% | Non-Coding |
| 78. | NT_086557 | ATGCG | 3 | 2502543 | 2502557 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 79. | NT_086557 | GAGGT | 3 | 2536980 | 2536994 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 80. | NT_086557 | GTACC | 4 | 2596775 | 2596794 | 20 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 81. | NT_086557 | ACAGA | 3 | 2610312 | 2610326 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 82. | NT_086557 | CACCT | 4 | 2610445 | 2610464 | 20 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 83. | NT_086557 | TCCCA | 3 | 2617836 | 2617850 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 84. | NT_086557 | CTGCA | 3 | 2627900 | 2627914 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 85. | NT_086557 | CAGTT | 5 | 2628301 | 2628325 | 25 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 86. | NT_086557 | CGAAT | 3 | 2641521 | 2641535 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 87. | NT_086557 | GTTGA | 3 | 2646241 | 2646255 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 88. | NT_086557 | ATGGA | 3 | 2663501 | 2663515 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 89. | NT_086557 | AAGAA | 8 | 2681035 | 2681074 | 40 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 90. | NT_086557 | ATGAA | 3 | 2691722 | 2691736 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 91. | NT_086557 | ACAGG | 3 | 2695849 | 2695863 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | 46128985 |
| 92. | NT_086557 | ATGGG | 3 | 2741384 | 2741398 | 15 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 93. | NT_086557 | CACCC | 3 | 2755822 | 2755836 | 15 | 20.00% | 0.00% | 0.00% | 80.00% | Non-Coding |
| 94. | NT_086557 | AACAA | 3 | 2764582 | 2764596 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 95. | NT_086557 | AGCAC | 3 | 2770249 | 2770263 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 96. | NT_086557 | TAAAA | 3 | 2772130 | 2772144 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 97. | NT_086557 | CCAGC | 3 | 2777360 | 2777374 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |
| 98. | NT_086557 | TCCAG | 4 | 2789739 | 2789758 | 20 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 99. | NT_086557 | GCTCA | 3 | 2807154 | 2807168 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | 46129274 |
| 100. | NT_086557 | TCTTT | 4 | 2913808 | 2913827 | 20 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 101. | NT_086557 | GCTGA | 3 | 3141013 | 3141027 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 102. | NT_086557 | TACAG | 3 | 3160323 | 3160337 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 103. | NT_086557 | AGCCA | 3 | 3174449 | 3174463 | 15 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 104. | NT_086557 | GACAG | 3 | 3212508 | 3212522 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 105. | NT_086557 | GTTTG | 3 | 3219897 | 3219911 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 106. | NT_086557 | TACGG | 3 | 3220050 | 3220064 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 107. | NT_086557 | ACCAG | 4 | 3220718 | 3220737 | 20 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |