List of
Imperfect Tetra
-nucleotide repeats in Gibberella zeae PH-1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NT_086522 | TTAT | 3 | 1047 | 1058 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NT_086522 | GGAT | 3 | 3524 | 3534 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 3. | NT_086522 | ACCC | 3 | 4827 | 4837 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 4. | NT_086522 | TTAA | 3 | 10067 | 10078 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NT_086522 | ATAA | 3 | 19831 | 19842 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NT_086522 | CATA | 3 | 19916 | 19927 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 7. | NT_086522 | AAAG | 3 | 26594 | 26605 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 46140001 |
| 8. | NT_086522 | CGAG | 3 | 27100 | 27110 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 9. | NT_086522 | GGTT | 3 | 28922 | 28933 | 12 | 0.00% | 50.00% | 50.00% | 0.00% | 46140003 |
| 10. | NT_086522 | GAAG | 3 | 29411 | 29423 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 46140003 |
| 11. | NT_086522 | GGGA | 3 | 30882 | 30892 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 12. | NT_086522 | GATC | 3 | 37950 | 37961 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 46140011 |
| 13. | NT_086522 | CATT | 3 | 38853 | 38864 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 46140011 |
| 14. | NT_086522 | TTGA | 3 | 42259 | 42269 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | 46140015 |
| 15. | NT_086522 | ATCT | 3 | 46606 | 46616 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | 46140019 |
| 16. | NT_086522 | AATT | 3 | 48143 | 48154 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 17. | NT_086522 | CTAT | 3 | 74005 | 74015 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 18. | NT_086522 | ATGC | 3 | 80772 | 80783 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | 46140049 |
| 19. | NT_086522 | AGCT | 3 | 90127 | 90137 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 46140055 |
| 20. | NT_086522 | TGTA | 3 | 93780 | 93790 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 21. | NT_086522 | CAGC | 3 | 100473 | 100484 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 46140061 |
| 22. | NT_086522 | GGTT | 3 | 109441 | 109453 | 13 | 0.00% | 50.00% | 50.00% | 0.00% | 46140069 |
| 23. | NT_086522 | TTTC | 3 | 115720 | 115731 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 24. | NT_086522 | CAAC | 3 | 120272 | 120283 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 46140079 |
| 25. | NT_086522 | TCAA | 3 | 120938 | 120949 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 46140079 |
| 26. | NT_086522 | AATT | 3 | 126423 | 126433 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NT_086522 | TAAT | 3 | 126787 | 126798 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 28. | NT_086522 | ATAA | 4 | 127053 | 127068 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 29. | NT_086522 | TTAA | 3 | 127618 | 127628 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NT_086522 | TTAA | 3 | 127870 | 127882 | 13 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 31. | NT_086522 | TTAT | 3 | 128050 | 128061 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 32. | NT_086522 | TTTA | 3 | 128544 | 128555 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NT_086522 | CGAA | 3 | 130188 | 130199 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 34. | NT_086522 | CAGC | 3 | 136700 | 136710 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 46140091 |
| 35. | NT_086522 | CAAG | 3 | 147375 | 147385 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 36. | NT_086522 | AGCC | 3 | 148567 | 148578 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 46140099 |
| 37. | NT_086522 | GGAA | 3 | 160489 | 160500 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 46140109 |
| 38. | NT_086522 | ATGT | 3 | 161333 | 161344 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 46140109 |
| 39. | NT_086522 | CCAC | 5 | 167192 | 167211 | 20 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 40. | NT_086522 | ATGT | 3 | 182338 | 182348 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 41. | NT_086522 | TAAG | 3 | 182600 | 182611 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 46140125 |
| 42. | NT_086522 | TTAA | 3 | 189743 | 189754 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | 46140127 |
| 43. | NT_086522 | TTTA | 3 | 189771 | 189782 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 46140127 |
| 44. | NT_086522 | TATT | 3 | 189932 | 189944 | 13 | 25.00% | 75.00% | 0.00% | 0.00% | 46140127 |
| 45. | NT_086522 | TTTA | 3 | 189949 | 189959 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | 46140127 |
| 46. | NT_086522 | AAAT | 3 | 190008 | 190019 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 46140127 |
| 47. | NT_086522 | AAAT | 3 | 190188 | 190199 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 46140127 |