List of
Imperfect Penta
-nucleotide repeats in Tetrapisispora phaffii CBS 4417
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016528 | CTAAA | 3 | 16060 | 16074 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 2. | NC_016528 | GATGA | 5 | 20471 | 20495 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 3. | NC_016528 | AAAAG | 4 | 45891 | 45910 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | 367004465 |
| 4. | NC_016528 | TAATT | 4 | 46157 | 46177 | 21 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NC_016528 | ATATC | 3 | 51961 | 51974 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | 367004471 |
| 6. | NC_016528 | ATCTC | 3 | 55416 | 55430 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 367004475 |
| 7. | NC_016528 | TCTTT | 3 | 56959 | 56973 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 8. | NC_016528 | TCTTT | 3 | 57000 | 57014 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 9. | NC_016528 | TGAAA | 3 | 61368 | 61381 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | 367004479 |
| 10. | NC_016528 | AATTG | 3 | 94326 | 94340 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 11. | NC_016528 | AAACA | 3 | 115247 | 115261 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 12. | NC_016528 | AAATT | 3 | 120112 | 120125 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | 367004533 |
| 13. | NC_016528 | TATAT | 3 | 126449 | 126462 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | 367004537 |
| 14. | NC_016528 | GTGTT | 3 | 128184 | 128197 | 14 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 15. | NC_016528 | AAAGA | 4 | 136595 | 136613 | 19 | 80.00% | 0.00% | 20.00% | 0.00% | 367004545 |
| 16. | NC_016528 | ACAAT | 3 | 138242 | 138256 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | 367004547 |
| 17. | NC_016528 | AAAAG | 3 | 175683 | 175697 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 18. | NC_016528 | ACAAG | 3 | 179666 | 179680 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 19. | NC_016528 | TTGTC | 4 | 182303 | 182323 | 21 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 20. | NC_016528 | AAAAT | 7 | 199574 | 199608 | 35 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NC_016528 | ATAAC | 3 | 228220 | 228234 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 22. | NC_016528 | TTTAA | 3 | 245191 | 245205 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NC_016528 | TTTTA | 3 | 274408 | 274422 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 367004651 |
| 24. | NC_016528 | CATTC | 3 | 285309 | 285322 | 14 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 25. | NC_016528 | ATGAG | 3 | 310867 | 310886 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 26. | NC_016528 | TGCGT | 3 | 343324 | 343337 | 14 | 0.00% | 40.00% | 40.00% | 20.00% | 367004717 |
| 27. | NC_016528 | TCAAT | 3 | 344603 | 344618 | 16 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 28. | NC_016528 | TCATC | 4 | 344828 | 344847 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 29. | NC_016528 | GGAAT | 3 | 356463 | 356476 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 30. | NC_016528 | ATGAG | 4 | 368090 | 368109 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 31. | NC_016528 | TGTAA | 3 | 407421 | 407435 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 367004777 |
| 32. | NC_016528 | TTGAA | 5 | 414047 | 414072 | 26 | 40.00% | 40.00% | 20.00% | 0.00% | 367004779 |
| 33. | NC_016528 | TTTTC | 3 | 420718 | 420731 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | 367004787 |
| 34. | NC_016528 | AAAAT | 3 | 436461 | 436476 | 16 | 80.00% | 20.00% | 0.00% | 0.00% | 367004797 |
| 35. | NC_016528 | CAAAT | 3 | 484766 | 484779 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 367004845 |
| 36. | NC_016528 | TTTAT | 3 | 495033 | 495047 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016528 | AATAT | 3 | 496285 | 496300 | 16 | 60.00% | 40.00% | 0.00% | 0.00% | 367004855 |
| 38. | NC_016528 | TTGCT | 3 | 507407 | 507420 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 367004867 |
| 39. | NC_016528 | TTTTG | 3 | 520330 | 520343 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 40. | NC_016528 | ATTAT | 3 | 527581 | 527595 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NC_016528 | TTTAT | 5 | 535162 | 535186 | 25 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016528 | TTTTA | 3 | 535237 | 535251 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_016528 | TATTT | 4 | 541019 | 541042 | 24 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NC_016528 | TTTTG | 3 | 552627 | 552641 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | 367004905 |
| 45. | NC_016528 | TTTCT | 3 | 553844 | 553857 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | 367004907 |
| 46. | NC_016528 | GCAGA | 3 | 571138 | 571151 | 14 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 47. | NC_016528 | TGGGA | 4 | 571152 | 571171 | 20 | 20.00% | 20.00% | 60.00% | 0.00% | Non-Coding |
| 48. | NC_016528 | AAAGA | 3 | 601580 | 601593 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 49. | NC_016528 | ATTTT | 3 | 606456 | 606470 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 367004955 |
| 50. | NC_016528 | TTTCG | 5 | 607561 | 607585 | 25 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 51. | NC_016528 | GAACT | 5 | 607721 | 607745 | 25 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 52. | NC_016528 | ATATA | 3 | 620815 | 620829 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NC_016528 | GAAAA | 4 | 624811 | 624831 | 21 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 54. | NC_016528 | TATTT | 5 | 668701 | 668726 | 26 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 55. | NC_016528 | AAAAT | 3 | 676598 | 676611 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 56. | NC_016528 | TTTTA | 3 | 697271 | 697286 | 16 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 57. | NC_016528 | TGGAA | 3 | 710898 | 710912 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 367005049 |
| 58. | NC_016528 | CTTTA | 3 | 718022 | 718036 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 59. | NC_016528 | AAAGA | 3 | 724268 | 724282 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 60. | NC_016528 | GGGAG | 3 | 735725 | 735738 | 14 | 20.00% | 0.00% | 80.00% | 0.00% | Non-Coding |