List of
Perfect Tetra
-nucleotide repeats in Tetrapisispora phaffii CBS 4417
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016525 | TTAC | 3 | 462 | 473 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 2. | NC_016525 | AATA | 3 | 32197 | 32208 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 3. | NC_016525 | GAGG | 3 | 73590 | 73601 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | Non-Coding |
| 4. | NC_016525 | AAAG | 3 | 82547 | 82558 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 367002446 |
| 5. | NC_016525 | TTTC | 3 | 91276 | 91287 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 367002452 |
| 6. | NC_016525 | TATG | 3 | 120629 | 120640 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 7. | NC_016525 | TATC | 3 | 124292 | 124303 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NC_016525 | TATT | 3 | 126522 | 126533 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 367002482 |
| 9. | NC_016525 | CGAA | 4 | 185454 | 185469 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 10. | NC_016525 | TATG | 4 | 216137 | 216152 | 16 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 11. | NC_016525 | ATTA | 3 | 252389 | 252400 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NC_016525 | GAAA | 4 | 260782 | 260797 | 16 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 13. | NC_016525 | TAAA | 3 | 265115 | 265126 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 14. | NC_016525 | TTTG | 3 | 293957 | 293968 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NC_016525 | ATAG | 6 | 296350 | 296373 | 24 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 16. | NC_016525 | TGAG | 3 | 299666 | 299677 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 17. | NC_016525 | ATTT | 3 | 303297 | 303308 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 18. | NC_016525 | TATT | 3 | 321686 | 321697 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 19. | NC_016525 | AGTT | 3 | 354551 | 354562 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 20. | NC_016525 | TTTA | 3 | 359915 | 359926 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 367002682 |
| 21. | NC_016525 | ACTT | 3 | 378093 | 378104 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NC_016525 | ATAA | 3 | 386570 | 386581 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NC_016525 | TTAT | 3 | 394465 | 394476 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 367002712 |
| 24. | NC_016525 | GATG | 3 | 397401 | 397412 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 25. | NC_016525 | TAAT | 4 | 412895 | 412910 | 16 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_016525 | GATA | 3 | 442291 | 442302 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 27. | NC_016525 | TTTC | 3 | 447094 | 447105 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 367002762 |
| 28. | NC_016525 | CTAT | 3 | 460242 | 460253 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 29. | NC_016525 | ATAA | 3 | 463117 | 463128 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 30. | NC_016525 | ATTG | 3 | 478323 | 478334 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 31. | NC_016525 | GAAA | 3 | 509321 | 509332 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 32. | NC_016525 | ACAA | 3 | 513102 | 513113 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 33. | NC_016525 | TTTA | 3 | 529034 | 529045 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NC_016525 | TATT | 3 | 576521 | 576532 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NC_016525 | ATGT | 3 | 576646 | 576657 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 36. | NC_016525 | ATTT | 4 | 580876 | 580891 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016525 | ATAA | 4 | 583375 | 583390 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 38. | NC_016525 | ATGT | 3 | 612701 | 612712 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 39. | NC_016525 | TTTA | 3 | 621153 | 621164 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 40. | NC_016525 | ATAC | 3 | 625762 | 625773 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 41. | NC_016525 | CAAA | 3 | 666162 | 666173 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 42. | NC_016525 | ATAC | 4 | 697871 | 697886 | 16 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 43. | NC_016525 | GTGC | 3 | 716126 | 716137 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | 367003024 |
| 44. | NC_016525 | CACG | 3 | 716289 | 716300 | 12 | 25.00% | 0.00% | 25.00% | 50.00% | 367003024 |
| 45. | NC_016525 | TCTT | 3 | 725900 | 725911 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 46. | NC_016525 | ATAG | 3 | 738135 | 738146 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 47. | NC_016525 | ATTT | 3 | 758210 | 758221 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 48. | NC_016525 | ATAA | 3 | 758289 | 758300 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 49. | NC_016525 | CTAT | 3 | 781440 | 781451 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 50. | NC_016525 | CATG | 3 | 781521 | 781532 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 51. | NC_016525 | TTAA | 3 | 791943 | 791954 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_016525 | TATT | 3 | 792356 | 792367 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NC_016525 | TAAT | 3 | 793086 | 793097 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NC_016525 | TTAC | 3 | 812294 | 812305 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |