List of
Perfect Tetra
-nucleotide repeats in Tetrapisispora phaffii CBS 4417
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016521 | CTCA | 4 | 269 | 284 | 16 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 2. | NC_016521 | GCAA | 3 | 1025 | 1036 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 3. | NC_016521 | ACCA | 3 | 5560 | 5571 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NC_016521 | CACG | 4 | 82859 | 82874 | 16 | 25.00% | 0.00% | 25.00% | 50.00% | Non-Coding |
| 5. | NC_016521 | TAAA | 3 | 123163 | 123174 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NC_016521 | AAGA | 3 | 173687 | 173698 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 366998894 |
| 7. | NC_016521 | TGTA | 3 | 178237 | 178248 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 8. | NC_016521 | AGAA | 3 | 193417 | 193428 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 366998906 |
| 9. | NC_016521 | TGAG | 4 | 208388 | 208403 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 10. | NC_016521 | TCGT | 3 | 215223 | 215234 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 11. | NC_016521 | AATA | 3 | 237117 | 237128 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NC_016521 | CTAT | 3 | 330018 | 330029 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 13. | NC_016521 | CATT | 3 | 340450 | 340461 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 366999048 |
| 14. | NC_016521 | TAAT | 3 | 349652 | 349663 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 15. | NC_016521 | ACAT | 3 | 349796 | 349807 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 16. | NC_016521 | ACAA | 4 | 367209 | 367224 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NC_016521 | TATT | 3 | 379564 | 379575 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 366999082 |
| 18. | NC_016521 | CTTT | 3 | 406758 | 406769 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 366999106 |
| 19. | NC_016521 | AATG | 3 | 426457 | 426468 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 366999120 |
| 20. | NC_016521 | AATT | 3 | 437745 | 437756 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 21. | NC_016521 | GAAA | 3 | 443488 | 443499 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 366999136 |
| 22. | NC_016521 | CAAT | 3 | 481888 | 481899 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 366999158 |
| 23. | NC_016521 | TACA | 3 | 497899 | 497910 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 24. | NC_016521 | ATTA | 3 | 499882 | 499893 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 25. | NC_016521 | AATT | 3 | 502608 | 502619 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_016521 | TCTA | 3 | 519952 | 519963 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 366999192 |
| 27. | NC_016521 | AAAG | 3 | 577565 | 577576 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 28. | NC_016521 | AGAC | 4 | 591718 | 591733 | 16 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 29. | NC_016521 | AATT | 3 | 640870 | 640881 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | 366999302 |
| 30. | NC_016521 | TCCT | 4 | 685297 | 685312 | 16 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 31. | NC_016521 | AGTG | 3 | 685440 | 685451 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 32. | NC_016521 | TATT | 3 | 703730 | 703741 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NC_016521 | TCTT | 4 | 712418 | 712433 | 16 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 34. | NC_016521 | TGTA | 3 | 713178 | 713189 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 35. | NC_016521 | TTTA | 3 | 732109 | 732120 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 36. | NC_016521 | TAAT | 3 | 794182 | 794193 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016521 | GATA | 3 | 803290 | 803301 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 38. | NC_016521 | ATTG | 3 | 807415 | 807426 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 39. | NC_016521 | CAAT | 3 | 814340 | 814351 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 40. | NC_016521 | CAAC | 3 | 818989 | 819000 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | Non-Coding |
| 41. | NC_016521 | ATTA | 3 | 823474 | 823485 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016521 | GTGC | 3 | 834072 | 834083 | 12 | 0.00% | 25.00% | 50.00% | 25.00% | Non-Coding |
| 43. | NC_016521 | TCTT | 3 | 844158 | 844169 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 44. | NC_016521 | TTAT | 3 | 864719 | 864730 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_016521 | TGAT | 3 | 875942 | 875953 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 46. | NC_016521 | TCGT | 3 | 883639 | 883650 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 47. | NC_016521 | GTAT | 3 | 896202 | 896213 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 366999498 |
| 48. | NC_016521 | ATGT | 3 | 900672 | 900683 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 49. | NC_016521 | GTAT | 3 | 902464 | 902475 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 366999504 |
| 50. | NC_016521 | TTAA | 3 | 914735 | 914746 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 51. | NC_016521 | GAAT | 3 | 918582 | 918593 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 52. | NC_016521 | AAAT | 3 | 1006553 | 1006564 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 366999594 |
| 53. | NC_016521 | TAAA | 3 | 1052532 | 1052543 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 54. | NC_016521 | CTTT | 3 | 1114124 | 1114135 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 366999680 |
| 55. | NC_016521 | GAAT | 3 | 1115126 | 1115137 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 56. | NC_016521 | GATA | 3 | 1118678 | 1118689 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 57. | NC_016521 | CATA | 6 | 1125902 | 1125925 | 24 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 58. | NC_016521 | TGCA | 3 | 1125936 | 1125947 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 59. | NC_016521 | CATT | 3 | 1131323 | 1131334 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 60. | NC_016521 | ACTC | 3 | 1133604 | 1133615 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 61. | NC_016521 | TACA | 3 | 1141209 | 1141220 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 62. | NC_016521 | AAAC | 3 | 1144288 | 1144299 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 63. | NC_016521 | ATAA | 3 | 1145083 | 1145094 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 64. | NC_016521 | ATGG | 3 | 1160283 | 1160294 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 65. | NC_016521 | CGGG | 3 | 1164245 | 1164256 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |
| 66. | NC_016521 | ATGG | 3 | 1164503 | 1164514 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 67. | NC_016521 | GATG | 3 | 1164576 | 1164587 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 68. | NC_016521 | GATG | 3 | 1164713 | 1164724 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |