List of
Imperfect Penta
-nucleotide repeats in Tetrapisispora phaffii CBS 4417
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016521 | TAATA | 3 | 7182 | 7196 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_016521 | AAAGT | 3 | 25686 | 25701 | 16 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 3. | NC_016521 | TCATA | 3 | 83178 | 83191 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 4. | NC_016521 | TTGAA | 3 | 89429 | 89444 | 16 | 40.00% | 40.00% | 20.00% | 0.00% | 366998822 |
| 5. | NC_016521 | ATGTT | 8 | 98563 | 98601 | 39 | 20.00% | 60.00% | 20.00% | 0.00% | 366998828 |
| 6. | NC_016521 | AAGTC | 3 | 102086 | 102099 | 14 | 40.00% | 20.00% | 20.00% | 20.00% | 366998832 |
| 7. | NC_016521 | GGCTC | 3 | 108119 | 108132 | 14 | 0.00% | 20.00% | 40.00% | 40.00% | Non-Coding |
| 8. | NC_016521 | GAAAA | 3 | 123539 | 123553 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 366998850 |
| 9. | NC_016521 | CATCT | 3 | 132932 | 132946 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 10. | NC_016521 | TTGTT | 3 | 133844 | 133858 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 11. | NC_016521 | TCTCT | 3 | 152120 | 152133 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | 366998872 |
| 12. | NC_016521 | AAAAC | 3 | 154071 | 154085 | 15 | 80.00% | 0.00% | 0.00% | 20.00% | Non-Coding |
| 13. | NC_016521 | ATTAC | 3 | 156968 | 156982 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | 366998876 |
| 14. | NC_016521 | ATGAG | 6 | 165726 | 165755 | 30 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 15. | NC_016521 | TTAAT | 3 | 174334 | 174347 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NC_016521 | AGATG | 7 | 176412 | 176446 | 35 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 17. | NC_016521 | TAAAA | 3 | 187057 | 187071 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 366998906 |
| 18. | NC_016521 | AAATG | 3 | 200946 | 200960 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 19. | NC_016521 | ATGCG | 4 | 208646 | 208664 | 19 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 20. | NC_016521 | CGTTG | 4 | 208692 | 208711 | 20 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 21. | NC_016521 | TTTGA | 3 | 212779 | 212792 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 22. | NC_016521 | TTATG | 3 | 212909 | 212923 | 15 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 23. | NC_016521 | CGGAG | 4 | 215300 | 215319 | 20 | 20.00% | 0.00% | 60.00% | 20.00% | Non-Coding |
| 24. | NC_016521 | ATTAA | 3 | 219452 | 219466 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 25. | NC_016521 | TTTTA | 5 | 229425 | 229450 | 26 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_016521 | TATTT | 3 | 239695 | 239708 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | 366998950 |
| 27. | NC_016521 | TGTTT | 3 | 246556 | 246570 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 28. | NC_016521 | AGATG | 8 | 264342 | 264380 | 39 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 29. | NC_016521 | TTCTT | 3 | 265941 | 265954 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | 366998976 |
| 30. | NC_016521 | GATGA | 4 | 267533 | 267552 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 31. | NC_016521 | TATTT | 3 | 271619 | 271633 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 366998984 |
| 32. | NC_016521 | TCTTA | 6 | 280244 | 280273 | 30 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 33. | NC_016521 | ATCTC | 4 | 286011 | 286030 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 34. | NC_016521 | GGAAA | 3 | 296882 | 296897 | 16 | 60.00% | 0.00% | 40.00% | 0.00% | 366999008 |
| 35. | NC_016521 | AGAAA | 3 | 303818 | 303832 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 366999014 |
| 36. | NC_016521 | ATTTT | 4 | 306267 | 306286 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | 366999016 |
| 37. | NC_016521 | CGCGG | 3 | 322681 | 322695 | 15 | 0.00% | 0.00% | 60.00% | 40.00% | Non-Coding |
| 38. | NC_016521 | AATCA | 3 | 339683 | 339697 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 39. | NC_016521 | GATAA | 3 | 349962 | 349976 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 40. | NC_016521 | AAATA | 3 | 387413 | 387427 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 41. | NC_016521 | ATATT | 3 | 452841 | 452855 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 42. | NC_016521 | GTATT | 3 | 454996 | 455009 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 43. | NC_016521 | TTTAA | 3 | 459334 | 459348 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NC_016521 | TAATA | 3 | 473512 | 473526 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 366999152 |
| 45. | NC_016521 | TATAA | 3 | 484667 | 484680 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | 366999160 |
| 46. | NC_016521 | ATTAT | 3 | 497219 | 497233 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | 366999170 |
| 47. | NC_016521 | TTCAA | 3 | 497591 | 497606 | 16 | 40.00% | 40.00% | 0.00% | 20.00% | 366999170 |
| 48. | NC_016521 | TATTT | 5 | 499681 | 499705 | 25 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 49. | NC_016521 | TATAA | 3 | 508604 | 508619 | 16 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 50. | NC_016521 | AAAAT | 3 | 517790 | 517803 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | 366999192 |
| 51. | NC_016521 | AATAA | 3 | 544089 | 544102 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_016521 | ATATA | 3 | 566287 | 566300 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 53. | NC_016521 | GAAAG | 4 | 578361 | 578380 | 20 | 60.00% | 0.00% | 40.00% | 0.00% | Non-Coding |
| 54. | NC_016521 | CATAA | 3 | 593432 | 593446 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 55. | NC_016521 | TTTCT | 3 | 608523 | 608536 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 56. | NC_016521 | TAAAA | 3 | 615763 | 615777 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 366999276 |
| 57. | NC_016521 | TGTGT | 3 | 619482 | 619496 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 58. | NC_016521 | TCTCA | 4 | 650290 | 650309 | 20 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 59. | NC_016521 | ATTTT | 3 | 661434 | 661448 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 366999318 |
| 60. | NC_016521 | TAGAA | 3 | 661826 | 661839 | 14 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 61. | NC_016521 | TTTCT | 3 | 661914 | 661928 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 62. | NC_016521 | TATTG | 3 | 664932 | 664945 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 366999322 |
| 63. | NC_016521 | CTCAT | 3 | 666625 | 666639 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 64. | NC_016521 | GATGA | 5 | 673302 | 673326 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 65. | NC_016521 | TACCT | 3 | 686070 | 686084 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 66. | NC_016521 | AAAAT | 3 | 692246 | 692259 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 67. | NC_016521 | TTACT | 3 | 694396 | 694409 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366999350 |
| 68. | NC_016521 | TTTAA | 3 | 709957 | 709971 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | 366999362 |
| 69. | NC_016521 | TTATA | 3 | 714157 | 714171 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 70. | NC_016521 | GAATT | 3 | 716613 | 716626 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366999364 |
| 71. | NC_016521 | GAAAA | 3 | 721850 | 721865 | 16 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 72. | NC_016521 | ATTTC | 4 | 728309 | 728327 | 19 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 73. | NC_016521 | TAAAA | 4 | 733449 | 733468 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 74. | NC_016521 | TAAAA | 3 | 742094 | 742107 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 75. | NC_016521 | AAAAT | 3 | 742505 | 742519 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 76. | NC_016521 | TGAGA | 5 | 759541 | 759565 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 77. | NC_016521 | GAATT | 3 | 761029 | 761042 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 366999400 |
| 78. | NC_016521 | AATAT | 3 | 765122 | 765135 | 14 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 79. | NC_016521 | TTAAA | 3 | 783332 | 783346 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 366999412 |
| 80. | NC_016521 | AATAA | 3 | 794239 | 794253 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 81. | NC_016521 | TAACG | 3 | 818728 | 818742 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 82. | NC_016521 | GTGTT | 3 | 832917 | 832931 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | 366999448 |
| 83. | NC_016521 | GAGTA | 3 | 833316 | 833330 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 84. | NC_016521 | AAAAG | 3 | 843578 | 843592 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 85. | NC_016521 | TTCTG | 3 | 871598 | 871611 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 366999478 |
| 86. | NC_016521 | AAATA | 3 | 879995 | 880008 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 87. | NC_016521 | AATTT | 4 | 882872 | 882890 | 19 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 88. | NC_016521 | ATATT | 4 | 885851 | 885871 | 21 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 89. | NC_016521 | TTGTT | 3 | 900780 | 900793 | 14 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 90. | NC_016521 | GATTT | 3 | 916382 | 916395 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 91. | NC_016521 | GAAAA | 3 | 918047 | 918061 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 92. | NC_016521 | CTTTC | 3 | 919303 | 919316 | 14 | 0.00% | 60.00% | 0.00% | 40.00% | Non-Coding |
| 93. | NC_016521 | TTCGT | 3 | 927207 | 927221 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | Non-Coding |
| 94. | NC_016521 | CAATT | 4 | 953371 | 953390 | 20 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 95. | NC_016521 | TTTAT | 4 | 990046 | 990064 | 19 | 20.00% | 80.00% | 0.00% | 0.00% | 366999578 |
| 96. | NC_016521 | ATTTT | 3 | 1015060 | 1015073 | 14 | 20.00% | 80.00% | 0.00% | 0.00% | 366999600 |
| 97. | NC_016521 | TAATA | 3 | 1028665 | 1028679 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 98. | NC_016521 | CTTAT | 3 | 1032865 | 1032878 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | 366999616 |
| 99. | NC_016521 | TGGCT | 3 | 1059971 | 1059985 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | 366999634 |
| 100. | NC_016521 | AAATA | 3 | 1067987 | 1068001 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | 366999640 |
| 101. | NC_016521 | ATATT | 3 | 1077382 | 1077395 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 102. | NC_016521 | CATAC | 3 | 1111945 | 1111959 | 15 | 40.00% | 20.00% | 0.00% | 40.00% | Non-Coding |
| 103. | NC_016521 | GCACC | 3 | 1138733 | 1138747 | 15 | 20.00% | 0.00% | 20.00% | 60.00% | Non-Coding |