List of
Imperfect Hexa
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016500 | GAATAT | 3 | 10178 | 10194 | 17 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 2. | NC_016500 | AAAAAG | 3 | 86122 | 86139 | 18 | 83.33% | 0.00% | 16.67% | 0.00% | Non-Coding |
| 3. | NC_016500 | GGATGA | 4 | 98362 | 98391 | 30 | 33.33% | 16.67% | 50.00% | 0.00% | Non-Coding |
| 4. | NC_016500 | TCAAAT | 3 | 101168 | 101185 | 18 | 50.00% | 33.33% | 0.00% | 16.67% | 366997244 |
| 5. | NC_016500 | TCCACC | 4 | 111783 | 111806 | 24 | 16.67% | 16.67% | 0.00% | 66.67% | 366997256 |
| 6. | NC_016500 | ACGGGT | 3 | 112599 | 112616 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 366997256 |
| 7. | NC_016500 | AAAAAT | 3 | 129716 | 129733 | 18 | 83.33% | 16.67% | 0.00% | 0.00% | Non-Coding |
| 8. | NC_016500 | TTTAAA | 3 | 130236 | 130254 | 19 | 50.00% | 50.00% | 0.00% | 0.00% | 366997270 |
| 9. | NC_016500 | TGGAGG | 3 | 136621 | 136638 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | 366997276 |
| 10. | NC_016500 | TGGAGG | 3 | 137962 | 137979 | 18 | 16.67% | 16.67% | 66.67% | 0.00% | 366997276 |
| 11. | NC_016500 | GAAGAG | 3 | 140960 | 140977 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 366997278 |
| 12. | NC_016500 | TCTGTT | 3 | 151503 | 151520 | 18 | 0.00% | 66.67% | 16.67% | 16.67% | Non-Coding |
| 13. | NC_016500 | TTATCA | 3 | 159179 | 159196 | 18 | 33.33% | 50.00% | 0.00% | 16.67% | 366997306 |
| 14. | NC_016500 | GCTGAA | 3 | 174787 | 174804 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 366997320 |
| 15. | NC_016500 | TCGGAT | 3 | 182913 | 182931 | 19 | 16.67% | 33.33% | 33.33% | 16.67% | Non-Coding |
| 16. | NC_016500 | TCAACA | 3 | 187541 | 187558 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 366997328 |
| 17. | NC_016500 | TTGCAT | 3 | 222795 | 222812 | 18 | 16.67% | 50.00% | 16.67% | 16.67% | 366997368 |
| 18. | NC_016500 | CCTTGT | 3 | 224527 | 224544 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 366997368 |
| 19. | NC_016500 | TTGCCA | 4 | 225265 | 225288 | 24 | 16.67% | 33.33% | 16.67% | 33.33% | 366997368 |
| 20. | NC_016500 | TTGCTC | 5 | 230677 | 230707 | 31 | 0.00% | 50.00% | 16.67% | 33.33% | Non-Coding |
| 21. | NC_016500 | AAATTG | 3 | 233863 | 233880 | 18 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 22. | NC_016500 | ATATCG | 3 | 293770 | 293788 | 19 | 33.33% | 33.33% | 16.67% | 16.67% | 366997438 |
| 23. | NC_016500 | AGTTTG | 3 | 336439 | 336457 | 19 | 16.67% | 50.00% | 33.33% | 0.00% | Non-Coding |
| 24. | NC_016500 | TTTGGT | 3 | 353562 | 353580 | 19 | 0.00% | 66.67% | 33.33% | 0.00% | 366997484 |
| 25. | NC_016500 | TCCATC | 4 | 355283 | 355306 | 24 | 16.67% | 33.33% | 0.00% | 50.00% | 366997484 |
| 26. | NC_016500 | AACGAT | 3 | 360784 | 360801 | 18 | 50.00% | 16.67% | 16.67% | 16.67% | 366997486 |
| 27. | NC_016500 | TATTAC | 4 | 367663 | 367686 | 24 | 33.33% | 50.00% | 0.00% | 16.67% | 366997492 |
| 28. | NC_016500 | ATTAGA | 3 | 369174 | 369191 | 18 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 29. | NC_016500 | TTGAAA | 3 | 384445 | 384461 | 17 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 30. | NC_016500 | CTTTGA | 3 | 385242 | 385258 | 17 | 16.67% | 50.00% | 16.67% | 16.67% | 366997510 |
| 31. | NC_016500 | GAGAAC | 4 | 399245 | 399268 | 24 | 50.00% | 0.00% | 33.33% | 16.67% | Non-Coding |
| 32. | NC_016500 | CTTTCC | 7 | 400915 | 400956 | 42 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 33. | NC_016500 | TGAAGA | 6 | 406476 | 406511 | 36 | 50.00% | 16.67% | 33.33% | 0.00% | 366997532 |
| 34. | NC_016500 | ACCATC | 3 | 406556 | 406573 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | 366997532 |
| 35. | NC_016500 | TGAAGA | 3 | 406881 | 406898 | 18 | 50.00% | 16.67% | 33.33% | 0.00% | 366997532 |