List of
Perfect Tetra
-nucleotide repeats in Naumovozyma castellii CBS 4309
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_016499 | ATTT | 3 | 15318 | 15329 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 2. | NC_016499 | TTGT | 3 | 16134 | 16145 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 366996533 |
| 3. | NC_016499 | TTCA | 3 | 30906 | 30917 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 366996551 |
| 4. | NC_016499 | TATT | 4 | 39964 | 39979 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 5. | NC_016499 | ATAA | 3 | 48416 | 48427 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 6. | NC_016499 | TATT | 3 | 48699 | 48710 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NC_016499 | TTCT | 3 | 54497 | 54508 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NC_016499 | AGTG | 3 | 61343 | 61354 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 9. | NC_016499 | TTTC | 3 | 71497 | 71508 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 366996593 |
| 10. | NC_016499 | ATTA | 3 | 88025 | 88036 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_016499 | CATT | 3 | 98830 | 98841 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 12. | NC_016499 | TTAT | 5 | 99004 | 99023 | 20 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 13. | NC_016499 | GTAT | 3 | 106281 | 106292 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 14. | NC_016499 | ATTG | 3 | 127911 | 127922 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 15. | NC_016499 | TTCT | 3 | 135593 | 135604 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 366996651 |
| 16. | NC_016499 | TCAA | 3 | 154026 | 154037 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 17. | NC_016499 | CATT | 3 | 158100 | 158111 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 18. | NC_016499 | TCTT | 3 | 168906 | 168917 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 19. | NC_016499 | AAGC | 3 | 170691 | 170702 | 12 | 50.00% | 0.00% | 25.00% | 25.00% | Non-Coding |
| 20. | NC_016499 | AGTG | 4 | 206821 | 206836 | 16 | 25.00% | 25.00% | 50.00% | 0.00% | 366996727 |
| 21. | NC_016499 | ATAC | 3 | 229714 | 229725 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NC_016499 | CAAA | 4 | 264437 | 264452 | 16 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 23. | NC_016499 | AAAG | 3 | 269305 | 269316 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 24. | NC_016499 | AAAG | 3 | 269325 | 269336 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 25. | NC_016499 | TACT | 3 | 269995 | 270006 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 26. | NC_016499 | ATTT | 3 | 283751 | 283762 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 27. | NC_016499 | CTTG | 4 | 286826 | 286841 | 16 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 28. | NC_016499 | TTGA | 3 | 308332 | 308343 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 29. | NC_016499 | ACTA | 3 | 308900 | 308911 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 30. | NC_016499 | ATTC | 3 | 315986 | 315997 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 366996835 |
| 31. | NC_016499 | TATC | 3 | 352788 | 352799 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 32. | NC_016499 | TAAA | 3 | 375098 | 375109 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NC_016499 | ATAA | 4 | 388595 | 388610 | 16 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 34. | NC_016499 | ATTT | 3 | 394994 | 395005 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 35. | NC_016499 | TTTA | 3 | 397033 | 397044 | 12 | 25.00% | 75.00% | 0.00% | 0.00% | 366996917 |
| 36. | NC_016499 | ATTA | 3 | 409510 | 409521 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_016499 | CATC | 3 | 409639 | 409650 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 38. | NC_016499 | AATT | 3 | 413919 | 413930 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 39. | NC_016499 | CTTG | 3 | 417175 | 417186 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 40. | NC_016499 | TCAT | 3 | 448570 | 448581 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 41. | NC_016499 | AGCT | 3 | 471865 | 471876 | 12 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 42. | NC_016499 | TATT | 5 | 471982 | 472001 | 20 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_016499 | ATTT | 4 | 479340 | 479355 | 16 | 25.00% | 75.00% | 0.00% | 0.00% | Non-Coding |
| 44. | NC_016499 | AGAA | 3 | 481275 | 481286 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | Non-Coding |
| 45. | NC_016499 | ATGA | 3 | 497398 | 497409 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | 366997029 |
| 46. | NC_016499 | ACTA | 3 | 500832 | 500843 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 47. | NC_016499 | TTAC | 3 | 540133 | 540144 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 48. | NC_016499 | TGTA | 4 | 540615 | 540630 | 16 | 25.00% | 50.00% | 25.00% | 0.00% | Non-Coding |
| 49. | NC_016499 | TTCA | 3 | 544302 | 544313 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 50. | NC_016499 | TAGA | 3 | 548371 | 548382 | 12 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 51. | NC_016499 | TGAC | 4 | 552112 | 552127 | 16 | 25.00% | 25.00% | 25.00% | 25.00% | 366997095 |
| 52. | NC_016499 | TCAT | 3 | 552134 | 552145 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 53. | NC_016499 | AATA | 3 | 574512 | 574523 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 366997119 |
| 54. | NC_016499 | ATAC | 3 | 575514 | 575525 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |