FungRep

List of Perfect Tri -nucleotide repeats in Eremothecium cymbalariae DBVPG#7215

S. No.	Genome ID	Motif	Iterations	SSR Start	SSR End	Tract Length	A%	T%	G%	C%	Protein ID
1.	NC_016454	TAT	4	3583	3594	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
2.	NC_016454	TGA	6	57483	57500	18	33.33%	33.33%	33.33%	0.00%	Non-Coding
3.	NC_016454	GTT	5	57505	57519	15	0.00%	66.67%	33.33%	0.00%	Non-Coding
4.	NC_016454	GCT	4	57520	57531	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
5.	NC_016454	CTT	4	58581	58592	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
6.	NC_016454	TGC	10	58744	58773	30	0.00%	33.33%	33.33%	33.33%	Non-Coding
7.	NC_016454	CAG	4	58970	58981	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
8.	NC_016454	AGC	5	68543	68557	15	33.33%	0.00%	33.33%	33.33%	363754083
9.	NC_016454	CAA	5	68620	68634	15	66.67%	0.00%	0.00%	33.33%	363754083
10.	NC_016454	CAG	6	68635	68652	18	33.33%	0.00%	33.33%	33.33%	363754083
11.	NC_016454	CAA	5	68653	68667	15	66.67%	0.00%	0.00%	33.33%	363754083
12.	NC_016454	CAG	8	68668	68691	24	33.33%	0.00%	33.33%	33.33%	363754083
13.	NC_016454	TGG	4	83127	83138	12	0.00%	33.33%	66.67%	0.00%	363754095
14.	NC_016454	TAA	4	88686	88697	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
15.	NC_016454	AAT	4	89913	89924	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
16.	NC_016454	AGC	4	101890	101901	12	33.33%	0.00%	33.33%	33.33%	363754115
17.	NC_016454	ATA	5	107319	107333	15	66.67%	33.33%	0.00%	0.00%	Non-Coding
18.	NC_016454	ATA	7	107339	107359	21	66.67%	33.33%	0.00%	0.00%	Non-Coding
19.	NC_016454	GTC	4	107618	107629	12	0.00%	33.33%	33.33%	33.33%	363754121
20.	NC_016454	GTC	4	107633	107644	12	0.00%	33.33%	33.33%	33.33%	363754121
21.	NC_016454	TTA	4	108650	108661	12	33.33%	66.67%	0.00%	0.00%	363754121
22.	NC_016454	TGC	6	108845	108862	18	0.00%	33.33%	33.33%	33.33%	363754121
23.	NC_016454	TGC	4	114698	114709	12	0.00%	33.33%	33.33%	33.33%	363754125
24.	NC_016454	TGG	6	114719	114736	18	0.00%	33.33%	66.67%	0.00%	363754125
25.	NC_016454	TTG	49	114745	114891	147	0.00%	66.67%	33.33%	0.00%	363754125
26.	NC_016454	TGT	4	114989	115000	12	0.00%	66.67%	33.33%	0.00%	363754125
27.	NC_016454	ACA	4	117439	117450	12	66.67%	0.00%	0.00%	33.33%	Non-Coding
28.	NC_016454	TGC	5	117474	117488	15	0.00%	33.33%	33.33%	33.33%	Non-Coding
29.	NC_016454	CAG	4	120951	120962	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
30.	NC_016454	TGA	4	134229	134240	12	33.33%	33.33%	33.33%	0.00%	363754143
31.	NC_016454	TCT	4	151131	151142	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
32.	NC_016454	TCA	4	153480	153491	12	33.33%	33.33%	0.00%	33.33%	363754157
33.	NC_016454	GTT	4	166959	166970	12	0.00%	66.67%	33.33%	0.00%	Non-Coding
34.	NC_016454	AAG	4	168072	168083	12	66.67%	0.00%	33.33%	0.00%	363754165
35.	NC_016454	CAG	4	176878	176889	12	33.33%	0.00%	33.33%	33.33%	363754175
36.	NC_016454	ATC	4	180340	180351	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
37.	NC_016454	ATA	5	181422	181436	15	66.67%	33.33%	0.00%	0.00%	363754183
38.	NC_016454	ATG	4	182545	182556	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
39.	NC_016454	TGT	5	197425	197439	15	0.00%	66.67%	33.33%	0.00%	363754203
40.	NC_016454	TAA	4	208400	208411	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
41.	NC_016454	AGC	6	208943	208960	18	33.33%	0.00%	33.33%	33.33%	363754213
42.	NC_016454	AGC	6	208964	208981	18	33.33%	0.00%	33.33%	33.33%	363754213
43.	NC_016454	AGC	7	208985	209005	21	33.33%	0.00%	33.33%	33.33%	363754213
44.	NC_016454	TCT	5	224592	224606	15	0.00%	66.67%	0.00%	33.33%	363754225
45.	NC_016454	GCC	4	227969	227980	12	0.00%	0.00%	33.33%	66.67%	363754231
46.	NC_016454	AAT	4	228428	228439	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
47.	NC_016454	ATA	7	229035	229055	21	66.67%	33.33%	0.00%	0.00%	363754233
48.	NC_016454	GAG	4	232171	232182	12	33.33%	0.00%	66.67%	0.00%	Non-Coding
49.	NC_016454	TTC	4	266826	266837	12	0.00%	66.67%	0.00%	33.33%	363754275
50.	NC_016454	TAT	5	276085	276099	15	33.33%	66.67%	0.00%	0.00%	Non-Coding
51.	NC_016454	CAA	4	281253	281264	12	66.67%	0.00%	0.00%	33.33%	363754289
52.	NC_016454	ATA	22	286166	286231	66	66.67%	33.33%	0.00%	0.00%	Non-Coding
53.	NC_016454	ATC	4	286281	286292	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
54.	NC_016454	CTG	4	292010	292021	12	0.00%	33.33%	33.33%	33.33%	363754295
55.	NC_016454	TCA	4	297191	297202	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
56.	NC_016454	TCT	6	297203	297220	18	0.00%	66.67%	0.00%	33.33%	Non-Coding
57.	NC_016454	GCA	5	297892	297906	15	33.33%	0.00%	33.33%	33.33%	363754297
58.	NC_016454	ATT	5	300952	300966	15	33.33%	66.67%	0.00%	0.00%	Non-Coding
59.	NC_016454	TTG	4	319920	319931	12	0.00%	66.67%	33.33%	0.00%	363754319
60.	NC_016454	CAT	4	320970	320981	12	33.33%	33.33%	0.00%	33.33%	363754319
61.	NC_016454	TAT	4	320982	320993	12	33.33%	66.67%	0.00%	0.00%	363754319
62.	NC_016454	TCT	4	334615	334626	12	0.00%	66.67%	0.00%	33.33%	363754329
63.	NC_016454	CAG	4	334628	334639	12	33.33%	0.00%	33.33%	33.33%	363754329
64.	NC_016454	CTG	7	344726	344746	21	0.00%	33.33%	33.33%	33.33%	363754339
65.	NC_016454	AGC	8	369397	369420	24	33.33%	0.00%	33.33%	33.33%	363754367
66.	NC_016454	GAA	9	375523	375549	27	66.67%	0.00%	33.33%	0.00%	363754371
67.	NC_016454	ACC	4	376463	376474	12	33.33%	0.00%	0.00%	66.67%	Non-Coding
68.	NC_016454	TGC	6	385697	385714	18	0.00%	33.33%	33.33%	33.33%	363754379
69.	NC_016454	AAC	5	393783	393797	15	66.67%	0.00%	0.00%	33.33%	Non-Coding
70.	NC_016454	TGC	7	395367	395387	21	0.00%	33.33%	33.33%	33.33%	363754389
71.	NC_016454	TAG	8	398061	398084	24	33.33%	33.33%	33.33%	0.00%	Non-Coding
72.	NC_016454	CAA	7	407049	407069	21	66.67%	0.00%	0.00%	33.33%	363754399
73.	NC_016454	CAT	5	407070	407084	15	33.33%	33.33%	0.00%	33.33%	363754399
74.	NC_016454	GAG	4	416863	416874	12	33.33%	0.00%	66.67%	0.00%	363754409
75.	NC_016454	GCT	5	420941	420955	15	0.00%	33.33%	33.33%	33.33%	363754417
76.	NC_016454	CAC	4	429346	429357	12	33.33%	0.00%	0.00%	66.67%	363754425
77.	NC_016454	TAA	4	430033	430044	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
78.	NC_016454	ATA	4	450601	450612	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
79.	NC_016454	TCT	5	476290	476304	15	0.00%	66.67%	0.00%	33.33%	363754475
80.	NC_016454	ACT	5	483046	483060	15	33.33%	33.33%	0.00%	33.33%	363754483
81.	NC_016454	CTG	9	484492	484518	27	0.00%	33.33%	33.33%	33.33%	363754483
82.	NC_016454	CAA	4	484756	484767	12	66.67%	0.00%	0.00%	33.33%	Non-Coding
83.	NC_016454	TCG	17	486152	486202	51	0.00%	33.33%	33.33%	33.33%	363754485
84.	NC_016454	TCG	4	486206	486217	12	0.00%	33.33%	33.33%	33.33%	363754485
85.	NC_016454	TCG	6	486221	486238	18	0.00%	33.33%	33.33%	33.33%	363754485
86.	NC_016454	TCG	4	486599	486610	12	0.00%	33.33%	33.33%	33.33%	363754485
87.	NC_016454	TCG	4	486614	486625	12	0.00%	33.33%	33.33%	33.33%	363754485
88.	NC_016454	CTG	4	487739	487750	12	0.00%	33.33%	33.33%	33.33%	363754485
89.	NC_016454	TTC	4	496067	496078	12	0.00%	66.67%	0.00%	33.33%	363754491
90.	NC_016454	TAC	4	503691	503702	12	33.33%	33.33%	0.00%	33.33%	363754497
91.	NC_016454	GAA	4	504708	504719	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
92.	NC_016454	CCA	5	504975	504989	15	33.33%	0.00%	0.00%	66.67%	Non-Coding
93.	NC_016454	AGA	4	539191	539202	12	66.67%	0.00%	33.33%	0.00%	363754537
94.	NC_016454	TAT	4	553394	553405	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
95.	NC_016454	CAG	4	561817	561828	12	33.33%	0.00%	33.33%	33.33%	363754559
96.	NC_016454	ACA	4	564302	564313	12	66.67%	0.00%	0.00%	33.33%	363754561
97.	NC_016454	AGC	4	570259	570270	12	33.33%	0.00%	33.33%	33.33%	363754567
98.	NC_016454	TTC	4	581035	581046	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
99.	NC_016454	TGG	5	596356	596370	15	0.00%	33.33%	66.67%	0.00%	Non-Coding
100.	NC_016454	TAA	6	601077	601094	18	66.67%	33.33%	0.00%	0.00%	Non-Coding
101.	NC_016454	GTC	4	611261	611272	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
102.	NC_016454	GAC	6	611275	611292	18	33.33%	0.00%	33.33%	33.33%	Non-Coding
103.	NC_016454	AGT	4	617265	617276	12	33.33%	33.33%	33.33%	0.00%	363754601
104.	NC_016454	AGC	4	617277	617288	12	33.33%	0.00%	33.33%	33.33%	363754601
105.	NC_016454	GTA	4	619928	619939	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
106.	NC_016454	TCA	5	636023	636037	15	33.33%	33.33%	0.00%	33.33%	363754617
107.	NC_016454	AGC	8	640869	640892	24	33.33%	0.00%	33.33%	33.33%	363754621
108.	NC_016454	ACT	4	641097	641108	12	33.33%	33.33%	0.00%	33.33%	363754621
109.	NC_016454	AGC	4	651954	651965	12	33.33%	0.00%	33.33%	33.33%	363754633
110.	NC_016454	TAT	4	653095	653106	12	33.33%	66.67%	0.00%	0.00%	363754635
111.	NC_016454	TGT	7	656406	656426	21	0.00%	66.67%	33.33%	0.00%	Non-Coding
112.	NC_016454	ATC	5	671175	671189	15	33.33%	33.33%	0.00%	33.33%	363754649
113.	NC_016454	TTC	4	671190	671201	12	0.00%	66.67%	0.00%	33.33%	363754649
114.	NC_016454	ATA	5	688713	688727	15	66.67%	33.33%	0.00%	0.00%	363754663
115.	NC_016454	ATA	4	699430	699441	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
116.	NC_016454	TGG	5	699520	699534	15	0.00%	33.33%	66.67%	0.00%	Non-Coding
117.	NC_016454	TCA	5	699928	699942	15	33.33%	33.33%	0.00%	33.33%	363754673
118.	NC_016454	TTG	4	700378	700389	12	0.00%	66.67%	33.33%	0.00%	363754673
119.	NC_016454	ATT	5	700860	700874	15	33.33%	66.67%	0.00%	0.00%	363754673
120.	NC_016454	TAT	4	700880	700891	12	33.33%	66.67%	0.00%	0.00%	363754673
121.	NC_016454	AGT	4	700893	700904	12	33.33%	33.33%	33.33%	0.00%	363754673
122.	NC_016454	CCT	5	702641	702655	15	0.00%	33.33%	0.00%	66.67%	Non-Coding
123.	NC_016454	CAT	4	714033	714044	12	33.33%	33.33%	0.00%	33.33%	363754681
124.	NC_016454	CAC	5	723382	723396	15	33.33%	0.00%	0.00%	66.67%	363754685
125.	NC_016454	TCC	6	732645	732662	18	0.00%	33.33%	0.00%	66.67%	363754699
126.	NC_016454	TCG	5	732915	732929	15	0.00%	33.33%	33.33%	33.33%	363754699
127.	NC_016454	CGC	4	732944	732955	12	0.00%	0.00%	33.33%	66.67%	363754699
128.	NC_016454	CAG	5	747987	748001	15	33.33%	0.00%	33.33%	33.33%	363754719
129.	NC_016454	CTC	4	752501	752512	12	0.00%	33.33%	0.00%	66.67%	363754725
130.	NC_016454	CTC	4	752720	752731	12	0.00%	33.33%	0.00%	66.67%	363754725
131.	NC_016454	ATG	7	754943	754963	21	33.33%	33.33%	33.33%	0.00%	363754727
132.	NC_016454	GTT	5	757792	757806	15	0.00%	66.67%	33.33%	0.00%	Non-Coding
133.	NC_016454	GCT	11	757807	757839	33	0.00%	33.33%	33.33%	33.33%	Non-Coding
134.	NC_016454	GCT	6	764199	764216	18	0.00%	33.33%	33.33%	33.33%	363754735
135.	NC_016454	TAA	21	768867	768929	63	66.67%	33.33%	0.00%	0.00%	Non-Coding
136.	NC_016454	GTC	4	773143	773154	12	0.00%	33.33%	33.33%	33.33%	363754741
137.	NC_016454	TTC	4	775799	775810	12	0.00%	66.67%	0.00%	33.33%	363754747
138.	NC_016454	TGC	7	781439	781459	21	0.00%	33.33%	33.33%	33.33%	363754751
139.	NC_016454	CTG	6	781801	781818	18	0.00%	33.33%	33.33%	33.33%	363754751
140.	NC_016454	AGA	4	790528	790539	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
141.	NC_016454	AGC	7	796562	796582	21	33.33%	0.00%	33.33%	33.33%	363754769
142.	NC_016454	GGT	4	805748	805759	12	0.00%	33.33%	66.67%	0.00%	363754775
143.	NC_016454	AAG	4	807324	807335	12	66.67%	0.00%	33.33%	0.00%	363754777
144.	NC_016454	CAC	4	815421	815432	12	33.33%	0.00%	0.00%	66.67%	Non-Coding
145.	NC_016454	TAC	4	825745	825756	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
146.	NC_016454	TAT	5	829348	829362	15	33.33%	66.67%	0.00%	0.00%	Non-Coding
147.	NC_016454	TGT	5	829363	829377	15	0.00%	66.67%	33.33%	0.00%	Non-Coding
148.	NC_016454	CAT	6	854394	854411	18	33.33%	33.33%	0.00%	33.33%	363754825
149.	NC_016454	CAA	4	856430	856441	12	66.67%	0.00%	0.00%	33.33%	363754827
150.	NC_016454	CAA	4	857589	857600	12	66.67%	0.00%	0.00%	33.33%	363754827
151.	NC_016454	CAG	9	857601	857627	27	33.33%	0.00%	33.33%	33.33%	363754827
152.	NC_016454	CAA	7	857640	857660	21	66.67%	0.00%	0.00%	33.33%	363754827
153.	NC_016454	CAG	6	857661	857678	18	33.33%	0.00%	33.33%	33.33%	363754827
154.	NC_016454	CAG	4	857697	857708	12	33.33%	0.00%	33.33%	33.33%	363754827
155.	NC_016454	TGC	4	857843	857854	12	0.00%	33.33%	33.33%	33.33%	363754827
156.	NC_016454	ATG	5	866736	866750	15	33.33%	33.33%	33.33%	0.00%	363754835
157.	NC_016454	ATG	6	876974	876991	18	33.33%	33.33%	33.33%	0.00%	363754847
158.	NC_016454	TGA	4	877314	877325	12	33.33%	33.33%	33.33%	0.00%	363754847
159.	NC_016454	TGC	5	891409	891423	15	0.00%	33.33%	33.33%	33.33%	363754865
160.	NC_016454	TCC	4	892942	892953	12	0.00%	33.33%	0.00%	66.67%	363754867
161.	NC_016454	TCT	5	892984	892998	15	0.00%	66.67%	0.00%	33.33%	363754867
162.	NC_016454	TCC	4	892999	893010	12	0.00%	33.33%	0.00%	66.67%	363754867
163.	NC_016454	CTG	4	935170	935181	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
164.	NC_016454	CTC	5	935182	935196	15	0.00%	33.33%	0.00%	66.67%	Non-Coding
165.	NC_016454	TTG	4	937168	937179	12	0.00%	66.67%	33.33%	0.00%	363754909
166.	NC_016454	ATC	4	957689	957700	12	33.33%	33.33%	0.00%	33.33%	363754921

FungREP

List of Perfect Tri -nucleotide repeats in Eremothecium cymbalariae DBVPG#7215

No. of Users: