List of
Imperfect Hexa
-nucleotide repeats in Cryptococcus gattii WM276
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_014948 | TGTAAA | 5 | 37570 | 37599 | 30 | 50.00% | 33.33% | 16.67% | 0.00% | Non-Coding |
| 2. | NC_014948 | TTTCTC | 3 | 38006 | 38023 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 321263735 |
| 3. | NC_014948 | TGCTCA | 3 | 38052 | 38069 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 321263735 |
| 4. | NC_014948 | TCTTCC | 3 | 43463 | 43479 | 17 | 0.00% | 50.00% | 0.00% | 50.00% | 321263607 |
| 5. | NC_014948 | CCCCCT | 3 | 47295 | 47312 | 18 | 0.00% | 16.67% | 0.00% | 83.33% | 321263609 |
| 6. | NC_014948 | CGGGGA | 6 | 47840 | 47875 | 36 | 16.67% | 0.00% | 66.67% | 16.67% | 321263609 |
| 7. | NC_014948 | AGAGGA | 3 | 47883 | 47900 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 321263609 |
| 8. | NC_014948 | CCCCCA | 4 | 49220 | 49243 | 24 | 16.67% | 0.00% | 0.00% | 83.33% | 321263729 |
| 9. | NC_014948 | GGCTCG | 3 | 53570 | 53587 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | 321263611 |
| 10. | NC_014948 | ATCGGA | 3 | 57614 | 57631 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 321263613 |
| 11. | NC_014948 | AGCCGG | 4 | 57637 | 57660 | 24 | 16.67% | 0.00% | 50.00% | 33.33% | 321263613 |
| 12. | NC_014948 | TTTGCC | 3 | 57884 | 57901 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 321263613 |
| 13. | NC_014948 | GGACGC | 3 | 58684 | 58701 | 18 | 16.67% | 0.00% | 50.00% | 33.33% | 321263613 |
| 14. | NC_014948 | AACGAA | 4 | 59351 | 59374 | 24 | 66.67% | 0.00% | 16.67% | 16.67% | 321263613 |
| 15. | NC_014948 | AGACCG | 3 | 62293 | 62310 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 321263725 |
| 16. | NC_014948 | GGGGAG | 4 | 64021 | 64044 | 24 | 16.67% | 0.00% | 83.33% | 0.00% | Non-Coding |
| 17. | NC_014948 | GCCAGC | 3 | 78450 | 78467 | 18 | 16.67% | 0.00% | 33.33% | 50.00% | 321263619 |
| 18. | NC_014948 | GGCAAC | 4 | 79228 | 79251 | 24 | 33.33% | 0.00% | 33.33% | 33.33% | 321263619 |
| 19. | NC_014948 | CGAGGG | 3 | 90843 | 90860 | 18 | 16.67% | 0.00% | 66.67% | 16.67% | 321263623 |
| 20. | NC_014948 | TCCTCT | 4 | 100230 | 100253 | 24 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 21. | NC_014948 | TCATCG | 3 | 149758 | 149775 | 18 | 16.67% | 33.33% | 16.67% | 33.33% | 321263695 |
| 22. | NC_014948 | CCTCCA | 5 | 180164 | 180193 | 30 | 16.67% | 16.67% | 0.00% | 66.67% | Non-Coding |
| 23. | NC_014948 | CCATGC | 7 | 204427 | 204468 | 42 | 16.67% | 16.67% | 16.67% | 50.00% | 321263667 |
| 24. | NC_014948 | CCTGAA | 3 | 208351 | 208368 | 18 | 33.33% | 16.67% | 16.67% | 33.33% | 321264317 |
| 25. | NC_014948 | AGCCAT | 3 | 209972 | 209990 | 19 | 33.33% | 16.67% | 16.67% | 33.33% | Non-Coding |
| 26. | NC_014948 | TATTTT | 3 | 213555 | 213572 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 27. | NC_014948 | TCATCC | 3 | 217637 | 217655 | 19 | 16.67% | 33.33% | 0.00% | 50.00% | Non-Coding |
| 28. | NC_014948 | TGACTG | 3 | 242000 | 242017 | 18 | 16.67% | 33.33% | 33.33% | 16.67% | 321263893 |
| 29. | NC_014948 | TTTGTC | 3 | 244456 | 244474 | 19 | 0.00% | 66.67% | 16.67% | 16.67% | Non-Coding |
| 30. | NC_014948 | TGGATG | 4 | 261786 | 261809 | 24 | 16.67% | 33.33% | 50.00% | 0.00% | Non-Coding |
| 31. | NC_014948 | AAACCC | 3 | 268079 | 268096 | 18 | 50.00% | 0.00% | 0.00% | 50.00% | 321263885 |
| 32. | NC_014948 | GAGGAC | 4 | 312396 | 312419 | 24 | 33.33% | 0.00% | 50.00% | 16.67% | 321263785 |
| 33. | NC_014948 | TTCCCT | 3 | 318555 | 318572 | 18 | 0.00% | 50.00% | 0.00% | 50.00% | 321263865 |
| 34. | NC_014948 | ATACCA | 3 | 319904 | 319920 | 17 | 50.00% | 16.67% | 0.00% | 33.33% | 321263865 |
| 35. | NC_014948 | TGTTTT | 3 | 325549 | 325567 | 19 | 0.00% | 83.33% | 16.67% | 0.00% | Non-Coding |
| 36. | NC_014948 | TGACGA | 4 | 329987 | 330010 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | 321263791 |
| 37. | NC_014948 | TCCAAA | 3 | 332300 | 332317 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 321263793 |
| 38. | NC_014948 | CTTGAT | 7 | 343270 | 343311 | 42 | 16.67% | 50.00% | 16.67% | 16.67% | 321263857 |
| 39. | NC_014948 | TCCGTT | 3 | 343505 | 343522 | 18 | 0.00% | 50.00% | 16.67% | 33.33% | 321263857 |
| 40. | NC_014948 | GGTCGA | 3 | 346930 | 346947 | 18 | 16.67% | 16.67% | 50.00% | 16.67% | 321263855 |
| 41. | NC_014948 | GTTTCG | 3 | 443360 | 443377 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 321264035 |
| 42. | NC_014948 | TCCACC | 4 | 455699 | 455722 | 24 | 16.67% | 16.67% | 0.00% | 66.67% | 321264031 |
| 43. | NC_014948 | TGAAGC | 4 | 456226 | 456249 | 24 | 33.33% | 16.67% | 33.33% | 16.67% | 321264031 |
| 44. | NC_014948 | AGCTGC | 4 | 460635 | 460658 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 321263917 |
| 45. | NC_014948 | GTCAGA | 3 | 464846 | 464863 | 18 | 33.33% | 16.67% | 33.33% | 16.67% | 321264029 |
| 46. | NC_014948 | AGAGGA | 3 | 476069 | 476087 | 19 | 50.00% | 0.00% | 50.00% | 0.00% | 321263919 |
| 47. | NC_014948 | AAGAGG | 3 | 476825 | 476841 | 17 | 50.00% | 0.00% | 50.00% | 0.00% | 321263919 |
| 48. | NC_014948 | GTTTCC | 3 | 485983 | 485999 | 17 | 0.00% | 50.00% | 16.67% | 33.33% | 321263927 |
| 49. | NC_014948 | GGGAAA | 3 | 592074 | 592091 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | Non-Coding |
| 50. | NC_014948 | CCGCTG | 4 | 597595 | 597618 | 24 | 0.00% | 16.67% | 33.33% | 50.00% | 321263965 |
| 51. | NC_014948 | TGCAAA | 3 | 597860 | 597877 | 18 | 50.00% | 16.67% | 16.67% | 16.67% | 321263965 |
| 52. | NC_014948 | CACCTA | 3 | 598062 | 598079 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | 321263965 |
| 53. | NC_014948 | CACCCC | 3 | 598485 | 598502 | 18 | 16.67% | 0.00% | 0.00% | 83.33% | Non-Coding |
| 54. | NC_014948 | AATATA | 4 | 630244 | 630266 | 23 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 55. | NC_014948 | GGGTTG | 3 | 632250 | 632268 | 19 | 0.00% | 33.33% | 66.67% | 0.00% | 321264187 |
| 56. | NC_014948 | CCGCGT | 3 | 640416 | 640432 | 17 | 0.00% | 16.67% | 33.33% | 50.00% | Non-Coding |
| 57. | NC_014948 | GCAGCC | 3 | 642857 | 642875 | 19 | 16.67% | 0.00% | 33.33% | 50.00% | Non-Coding |
| 58. | NC_014948 | CTTCTC | 3 | 643567 | 643584 | 18 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 59. | NC_014948 | GGACGA | 3 | 651083 | 651100 | 18 | 33.33% | 0.00% | 50.00% | 16.67% | 321264053 |
| 60. | NC_014948 | CTGCAC | 3 | 655241 | 655258 | 18 | 16.67% | 16.67% | 16.67% | 50.00% | 321264055 |
| 61. | NC_014948 | AGGGAA | 3 | 688953 | 688970 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 321264067 |
| 62. | NC_014948 | TCCTCG | 4 | 702586 | 702609 | 24 | 0.00% | 33.33% | 16.67% | 50.00% | 321264163 |
| 63. | NC_014948 | CAGTCG | 4 | 702604 | 702627 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 321264163 |
| 64. | NC_014948 | CGTTTC | 4 | 702769 | 702792 | 24 | 0.00% | 50.00% | 16.67% | 33.33% | 321264163 |
| 65. | NC_014948 | TCCAAA | 3 | 704947 | 704964 | 18 | 50.00% | 16.67% | 0.00% | 33.33% | 321264073 |
| 66. | NC_014948 | TCAACC | 3 | 705798 | 705815 | 18 | 33.33% | 16.67% | 0.00% | 50.00% | 321264073 |
| 67. | NC_014948 | GGTGCC | 3 | 706156 | 706173 | 18 | 0.00% | 16.67% | 50.00% | 33.33% | 321264073 |
| 68. | NC_014948 | AGGCGC | 3 | 706719 | 706736 | 18 | 16.67% | 0.00% | 50.00% | 33.33% | 321264073 |
| 69. | NC_014948 | TATTGT | 4 | 711284 | 711305 | 22 | 16.67% | 66.67% | 16.67% | 0.00% | Non-Coding |
| 70. | NC_014948 | ACTATA | 3 | 743372 | 743390 | 19 | 50.00% | 33.33% | 0.00% | 16.67% | Non-Coding |
| 71. | NC_014948 | CAGCTG | 4 | 764134 | 764157 | 24 | 16.67% | 16.67% | 33.33% | 33.33% | 321264097 |
| 72. | NC_014948 | GCTGTT | 4 | 783126 | 783149 | 24 | 0.00% | 50.00% | 33.33% | 16.67% | 321264129 |
| 73. | NC_014948 | TGGCTT | 3 | 784079 | 784096 | 18 | 0.00% | 50.00% | 33.33% | 16.67% | 321264129 |
| 74. | NC_014948 | GCTTGC | 4 | 785003 | 785026 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | 321264129 |
| 75. | NC_014948 | TTCTGA | 4 | 786148 | 786171 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | 321264129 |
| 76. | NC_014948 | TGAGCT | 4 | 786584 | 786607 | 24 | 16.67% | 33.33% | 33.33% | 16.67% | 321264129 |
| 77. | NC_014948 | CTGTTG | 4 | 810011 | 810034 | 24 | 0.00% | 50.00% | 33.33% | 16.67% | 321264119 |
| 78. | NC_014948 | TGACGA | 3 | 833440 | 833458 | 19 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 79. | NC_014948 | ATTTTT | 3 | 842117 | 842134 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 80. | NC_014948 | ATTTTT | 3 | 852364 | 852381 | 18 | 16.67% | 83.33% | 0.00% | 0.00% | Non-Coding |
| 81. | NC_014948 | GGCTCA | 3 | 873595 | 873612 | 18 | 16.67% | 16.67% | 33.33% | 33.33% | 321264303 |
| 82. | NC_014948 | TCCTTT | 4 | 873987 | 874010 | 24 | 0.00% | 66.67% | 0.00% | 33.33% | 321264303 |
| 83. | NC_014948 | CGTCCC | 4 | 874527 | 874550 | 24 | 0.00% | 16.67% | 16.67% | 66.67% | 321264303 |
| 84. | NC_014948 | ATTCTG | 4 | 874608 | 874631 | 24 | 16.67% | 50.00% | 16.67% | 16.67% | 321264303 |
| 85. | NC_014948 | CCCGAC | 4 | 874734 | 874757 | 24 | 16.67% | 0.00% | 16.67% | 66.67% | 321264303 |
| 86. | NC_014948 | CCCACC | 3 | 880128 | 880145 | 18 | 16.67% | 0.00% | 0.00% | 83.33% | 321264199 |
| 87. | NC_014948 | AATGGC | 4 | 881229 | 881251 | 23 | 33.33% | 16.67% | 33.33% | 16.67% | Non-Coding |
| 88. | NC_014948 | GAGAAG | 3 | 890656 | 890673 | 18 | 50.00% | 0.00% | 50.00% | 0.00% | 321264201 |
| 89. | NC_014948 | TTGGGA | 4 | 895888 | 895911 | 24 | 16.67% | 33.33% | 50.00% | 0.00% | 321264293 |
| 90. | NC_014948 | CATTCA | 3 | 896283 | 896300 | 18 | 33.33% | 33.33% | 0.00% | 33.33% | 321264293 |
| 91. | NC_014948 | GCAAGG | 3 | 928025 | 928042 | 18 | 33.33% | 0.00% | 50.00% | 16.67% | 321264213 |
| 92. | NC_014948 | AGGACC | 3 | 928136 | 928153 | 18 | 33.33% | 0.00% | 33.33% | 33.33% | 321264213 |
| 93. | NC_014948 | AAGAGA | 3 | 942706 | 942724 | 19 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 94. | NC_014948 | CCAAAG | 3 | 954690 | 954707 | 18 | 50.00% | 0.00% | 16.67% | 33.33% | Non-Coding |
| 95. | NC_014948 | AGAAAA | 4 | 958578 | 958601 | 24 | 83.33% | 0.00% | 16.67% | 0.00% | 321264279 |
| 96. | NC_014948 | CCTCTC | 3 | 958669 | 958686 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 321264279 |
| 97. | NC_014948 | TTCAAG | 3 | 960562 | 960580 | 19 | 33.33% | 33.33% | 16.67% | 16.67% | Non-Coding |
| 98. | NC_014948 | ACAAGC | 5 | 964583 | 964612 | 30 | 50.00% | 0.00% | 16.67% | 33.33% | 321264227 |
| 99. | NC_014948 | CACAAA | 3 | 965431 | 965448 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | 321264227 |
| 100. | NC_014948 | TCCACT | 3 | 965610 | 965627 | 18 | 16.67% | 33.33% | 0.00% | 50.00% | 321264227 |
| 101. | NC_014948 | AACAAA | 3 | 982172 | 982189 | 18 | 83.33% | 0.00% | 0.00% | 16.67% | Non-Coding |
| 102. | NC_014948 | GCTCTC | 3 | 984945 | 984963 | 19 | 0.00% | 33.33% | 16.67% | 50.00% | 321264233 |
| 103. | NC_014948 | TTGGAT | 3 | 989048 | 989065 | 18 | 16.67% | 50.00% | 33.33% | 0.00% | 321264271 |
| 104. | NC_014948 | CGATCT | 3 | 990573 | 990596 | 24 | 16.67% | 33.33% | 16.67% | 33.33% | 321264269 |
| 105. | NC_014948 | GATTTT | 3 | 991053 | 991070 | 18 | 16.67% | 66.67% | 16.67% | 0.00% | 321264269 |
| 106. | NC_014948 | GAACGG | 5 | 991242 | 991271 | 30 | 33.33% | 0.00% | 50.00% | 16.67% | 321264269 |
| 107. | NC_014948 | CTTCCT | 3 | 993357 | 993375 | 19 | 0.00% | 50.00% | 0.00% | 50.00% | Non-Coding |
| 108. | NC_014948 | CGGTGG | 4 | 994281 | 994304 | 24 | 0.00% | 16.67% | 66.67% | 16.67% | Non-Coding |
| 109. | NC_014948 | GTTGCC | 4 | 994367 | 994390 | 24 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 110. | NC_014948 | CGTGCC | 4 | 994948 | 994971 | 24 | 0.00% | 16.67% | 33.33% | 50.00% | Non-Coding |