List of
Perfect Tri
-nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006687 | CTC | 4 | 13671 | 13682 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58267076 |
| 2. | NC_006687 | CTT | 4 | 21023 | 21034 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267890 |
| 3. | NC_006687 | AGG | 4 | 49849 | 49860 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 4. | NC_006687 | TGT | 4 | 71120 | 71131 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 5. | NC_006687 | AGA | 4 | 72204 | 72215 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58267142 |
| 6. | NC_006687 | TAG | 4 | 128402 | 128413 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 7. | NC_006687 | GCT | 4 | 130270 | 130281 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58267198 |
| 8. | NC_006687 | CAC | 4 | 159285 | 159296 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 9. | NC_006687 | ATA | 5 | 159436 | 159450 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 10. | NC_006687 | GAA | 4 | 163140 | 163151 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 11. | NC_006687 | CAG | 4 | 169191 | 169202 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58267248 |
| 12. | NC_006687 | GGA | 4 | 176558 | 176569 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 13. | NC_006687 | GTT | 4 | 179564 | 179575 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 14. | NC_006687 | AGA | 6 | 188687 | 188704 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | 58268028 |
| 15. | NC_006687 | CTT | 7 | 199955 | 199975 | 21 | 0.00% | 66.67% | 0.00% | 33.33% | 58267942 |
| 16. | NC_006687 | CTT | 6 | 200165 | 200182 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 58267942 |
| 17. | NC_006687 | TTC | 4 | 202992 | 203003 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58268014 |
| 18. | NC_006687 | CTT | 4 | 204050 | 204061 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267290 |
| 19. | NC_006687 | CTT | 4 | 209291 | 209302 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267296 |
| 20. | NC_006687 | CAT | 4 | 227507 | 227518 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 21. | NC_006687 | CAG | 4 | 255269 | 255280 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 22. | NC_006687 | GAA | 4 | 271449 | 271460 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58268024 |
| 23. | NC_006687 | GCG | 4 | 277255 | 277266 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 58267370 |
| 24. | NC_006687 | TCT | 4 | 297832 | 297843 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267388 |
| 25. | NC_006687 | TAA | 4 | 390676 | 390687 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 26. | NC_006687 | TAG | 4 | 416270 | 416281 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 27. | NC_006687 | TCT | 5 | 430660 | 430674 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 58267234 |
| 28. | NC_006687 | CAG | 4 | 448137 | 448148 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 29. | NC_006687 | TTC | 6 | 466296 | 466313 | 18 | 0.00% | 66.67% | 0.00% | 33.33% | 58267256 |
| 30. | NC_006687 | TTA | 5 | 467290 | 467304 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | 58267260 |
| 31. | NC_006687 | AGA | 5 | 473049 | 473063 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 58268144 |
| 32. | NC_006687 | TCA | 4 | 496067 | 496078 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 58267302 |
| 33. | NC_006687 | TGC | 4 | 496446 | 496457 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 34. | NC_006687 | ATG | 4 | 515909 | 515920 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 35. | NC_006687 | AAG | 4 | 516501 | 516512 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58267336 |
| 36. | NC_006687 | CGA | 4 | 518098 | 518109 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58267340 |
| 37. | NC_006687 | TCT | 4 | 521229 | 521240 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267348 |
| 38. | NC_006687 | TTC | 4 | 521243 | 521254 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267348 |
| 39. | NC_006687 | CTT | 4 | 533227 | 533238 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58268140 |
| 40. | NC_006687 | ATT | 4 | 533239 | 533250 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 58268140 |
| 41. | NC_006687 | TCA | 5 | 536858 | 536872 | 15 | 33.33% | 33.33% | 0.00% | 33.33% | 58267368 |
| 42. | NC_006687 | CCA | 5 | 567648 | 567662 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 58267432 |
| 43. | NC_006687 | TCC | 4 | 580803 | 580814 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58267450 |
| 44. | NC_006687 | ATT | 4 | 583103 | 583114 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_006687 | GCT | 4 | 600709 | 600720 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 46. | NC_006687 | CCA | 5 | 600780 | 600794 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 47. | NC_006687 | TTA | 4 | 608652 | 608663 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 48. | NC_006687 | TCC | 4 | 642944 | 642955 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58268128 |
| 49. | NC_006687 | GAT | 4 | 643832 | 643843 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 50. | NC_006687 | CTC | 4 | 649263 | 649274 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58267572 |
| 51. | NC_006687 | CAT | 4 | 655487 | 655498 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 52. | NC_006687 | TGC | 4 | 664911 | 664922 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58267586 |
| 53. | NC_006687 | TCC | 4 | 675054 | 675065 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58267594 |
| 54. | NC_006687 | TTC | 4 | 677293 | 677304 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267596 |
| 55. | NC_006687 | TTA | 4 | 679692 | 679703 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 56. | NC_006687 | TGC | 4 | 692225 | 692236 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | Non-Coding |
| 57. | NC_006687 | TGC | 9 | 712073 | 712099 | 27 | 0.00% | 33.33% | 33.33% | 33.33% | 58268116 |
| 58. | NC_006687 | TGT | 4 | 712100 | 712111 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 58268116 |
| 59. | NC_006687 | CTG | 4 | 723072 | 723083 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58267646 |
| 60. | NC_006687 | GCA | 4 | 758242 | 758253 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58267684 |
| 61. | NC_006687 | AGC | 4 | 882154 | 882165 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58267408 |
| 62. | NC_006687 | TCC | 5 | 905511 | 905525 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 58267438 |
| 63. | NC_006687 | ATT | 5 | 917928 | 917942 | 15 | 33.33% | 66.67% | 0.00% | 0.00% | Non-Coding |
| 64. | NC_006687 | GCT | 4 | 940505 | 940516 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58267468 |
| 65. | NC_006687 | AGG | 4 | 945334 | 945345 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 66. | NC_006687 | GCA | 5 | 945363 | 945377 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 67. | NC_006687 | AGA | 5 | 947449 | 947463 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 58267476 |
| 68. | NC_006687 | ACA | 4 | 948588 | 948599 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 69. | NC_006687 | GGC | 4 | 964602 | 964613 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 58267498 |
| 70. | NC_006687 | GCC | 4 | 966032 | 966043 | 12 | 0.00% | 0.00% | 33.33% | 66.67% | 58267500 |
| 71. | NC_006687 | TCC | 4 | 966248 | 966259 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 58267500 |
| 72. | NC_006687 | TCC | 5 | 966886 | 966900 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 58267500 |
| 73. | NC_006687 | TGT | 4 | 994203 | 994214 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 74. | NC_006687 | GAG | 5 | 1032107 | 1032121 | 15 | 33.33% | 0.00% | 66.67% | 0.00% | 58267554 |
| 75. | NC_006687 | GTG | 5 | 1032122 | 1032136 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | 58267554 |
| 76. | NC_006687 | CTT | 4 | 1033647 | 1033658 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 77. | NC_006687 | CTG | 4 | 1064508 | 1064519 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 58267578 |
| 78. | NC_006687 | TGC | 6 | 1065133 | 1065150 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 58267578 |
| 79. | NC_006687 | TGG | 4 | 1109047 | 1109058 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 58267712 |
| 80. | NC_006687 | GAA | 4 | 1113372 | 1113383 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 81. | NC_006687 | ACC | 5 | 1146765 | 1146779 | 15 | 33.33% | 0.00% | 0.00% | 66.67% | 58267808 |
| 82. | NC_006687 | GAA | 4 | 1168612 | 1168623 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 58267830 |
| 83. | NC_006687 | AGA | 5 | 1179282 | 1179296 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | 58267838 |
| 84. | NC_006687 | CAT | 4 | 1184283 | 1184294 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 58267844 |
| 85. | NC_006687 | GGT | 4 | 1192801 | 1192812 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 58267852 |
| 86. | NC_006687 | CCA | 4 | 1195951 | 1195962 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 58267856 |
| 87. | NC_006687 | CTT | 5 | 1214951 | 1214965 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | 58267882 |
| 88. | NC_006687 | TCT | 4 | 1215043 | 1215054 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267882 |
| 89. | NC_006687 | TCC | 6 | 1258072 | 1258089 | 18 | 0.00% | 33.33% | 0.00% | 66.67% | 58268060 |
| 90. | NC_006687 | ATA | 5 | 1281951 | 1281965 | 15 | 66.67% | 33.33% | 0.00% | 0.00% | 58267986 |
| 91. | NC_006687 | AGG | 4 | 1282024 | 1282035 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58267986 |
| 92. | NC_006687 | GTT | 4 | 1301084 | 1301095 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 58268058 |
| 93. | NC_006687 | AAC | 4 | 1305131 | 1305142 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 94. | NC_006687 | TGT | 4 | 1308258 | 1308269 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 58268010 |
| 95. | NC_006687 | GAA | 6 | 1333335 | 1333352 | 18 | 66.67% | 0.00% | 33.33% | 0.00% | 58268054 |
| 96. | NC_006687 | TGG | 4 | 1338874 | 1338885 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 97. | NC_006687 | TCT | 4 | 1348986 | 1348997 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 58267690 |
| 98. | NC_006687 | AAC | 6 | 1352286 | 1352303 | 18 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 99. | NC_006687 | ACC | 4 | 1363026 | 1363037 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 100. | NC_006687 | GAG | 4 | 1389038 | 1389049 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58267732 |
| 101. | NC_006687 | GCT | 6 | 1394183 | 1394200 | 18 | 0.00% | 33.33% | 33.33% | 33.33% | 58267744 |
| 102. | NC_006687 | CAG | 4 | 1394576 | 1394587 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 58267744 |
| 103. | NC_006687 | GTG | 5 | 1396737 | 1396751 | 15 | 0.00% | 33.33% | 66.67% | 0.00% | Non-Coding |
| 104. | NC_006687 | GGT | 4 | 1429569 | 1429580 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 58267760 |
| 105. | NC_006687 | TCT | 5 | 1430286 | 1430300 | 15 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 106. | NC_006687 | GAG | 4 | 1463673 | 1463684 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 58267782 |
| 107. | NC_006687 | GTA | 4 | 1504591 | 1504602 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 58267822 |