FungRep

List of Perfect Tri -nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21

S. No.	Genome ID	Motif	Iterations	SSR Start	SSR End	Tract Length	A%	T%	G%	C%	Protein ID
1.	NC_006685	TTG	4	26631	26642	12	0.00%	66.67%	33.33%	0.00%	Non-Coding
2.	NC_006685	CTT	4	29485	29496	12	0.00%	66.67%	0.00%	33.33%	58264412
3.	NC_006685	TAC	5	35802	35816	15	33.33%	33.33%	0.00%	33.33%	58264426
4.	NC_006685	TCC	4	65856	65867	12	0.00%	33.33%	0.00%	66.67%	Non-Coding
5.	NC_006685	TCT	4	70676	70687	12	0.00%	66.67%	0.00%	33.33%	58264484
6.	NC_006685	CCT	4	72507	72518	12	0.00%	33.33%	0.00%	66.67%	58264484
7.	NC_006685	AGG	4	76960	76971	12	33.33%	0.00%	66.67%	0.00%	58264488
8.	NC_006685	AGA	4	87836	87847	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
9.	NC_006685	ATT	4	92573	92584	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
10.	NC_006685	GAA	4	97589	97600	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
11.	NC_006685	ATT	5	100158	100172	15	33.33%	66.67%	0.00%	0.00%	Non-Coding
12.	NC_006685	GAT	5	106806	106820	15	33.33%	33.33%	33.33%	0.00%	58264524
13.	NC_006685	AGC	4	148030	148041	12	33.33%	0.00%	33.33%	33.33%	58264372
14.	NC_006685	GAC	4	223177	223188	12	33.33%	0.00%	33.33%	33.33%	58264448
15.	NC_006685	ACA	5	225595	225609	15	66.67%	0.00%	0.00%	33.33%	58264452
16.	NC_006685	TTG	4	247448	247459	12	0.00%	66.67%	33.33%	0.00%	Non-Coding
17.	NC_006685	GCT	4	252593	252604	12	0.00%	33.33%	33.33%	33.33%	58264478
18.	NC_006685	AAG	4	261498	261509	12	66.67%	0.00%	33.33%	0.00%	58264490
19.	NC_006685	AGG	4	280987	280998	12	33.33%	0.00%	66.67%	0.00%	Non-Coding
20.	NC_006685	GAT	4	293498	293509	12	33.33%	33.33%	33.33%	0.00%	58264526
21.	NC_006685	TGT	4	296224	296235	12	0.00%	66.67%	33.33%	0.00%	Non-Coding
22.	NC_006685	GGT	4	308333	308344	12	0.00%	33.33%	66.67%	0.00%	58264544
23.	NC_006685	GCG	5	313951	313965	15	0.00%	0.00%	66.67%	33.33%	Non-Coding
24.	NC_006685	ACG	4	317078	317089	12	33.33%	0.00%	33.33%	33.33%	58265604
25.	NC_006685	GAC	5	317110	317124	15	33.33%	0.00%	33.33%	33.33%	58265604
26.	NC_006685	GTT	4	319600	319611	12	0.00%	66.67%	33.33%	0.00%	58264560
27.	NC_006685	TCT	4	323979	323990	12	0.00%	66.67%	0.00%	33.33%	58264534
28.	NC_006685	ATG	4	325109	325120	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
29.	NC_006685	GAT	4	342406	342417	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
30.	NC_006685	CTC	4	363139	363150	12	0.00%	33.33%	0.00%	66.67%	58264582
31.	NC_006685	TCG	4	365523	365534	12	0.00%	33.33%	33.33%	33.33%	58264582
32.	NC_006685	AAT	4	367047	367058	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
33.	NC_006685	TTG	4	376344	376355	12	0.00%	66.67%	33.33%	0.00%	Non-Coding
34.	NC_006685	CTG	4	389250	389261	12	0.00%	33.33%	33.33%	33.33%	58264614
35.	NC_006685	CTC	4	392180	392191	12	0.00%	33.33%	0.00%	66.67%	58264630
36.	NC_006685	CAC	5	392192	392206	15	33.33%	0.00%	0.00%	66.67%	58264630
37.	NC_006685	CGC	6	392888	392905	18	0.00%	0.00%	33.33%	66.67%	58264630
38.	NC_006685	ATC	4	397594	397605	12	33.33%	33.33%	0.00%	33.33%	58265628
39.	NC_006685	TGC	4	404478	404489	12	0.00%	33.33%	33.33%	33.33%	58264644
40.	NC_006685	GAT	4	435071	435082	12	33.33%	33.33%	33.33%	0.00%	58264676
41.	NC_006685	CGT	4	441722	441733	12	0.00%	33.33%	33.33%	33.33%	58264688
42.	NC_006685	CGA	4	467283	467294	12	33.33%	0.00%	33.33%	33.33%	58264714
43.	NC_006685	GGT	4	479584	479595	12	0.00%	33.33%	66.67%	0.00%	58265618
44.	NC_006685	TCG	5	480410	480424	15	0.00%	33.33%	33.33%	33.33%	58264734
45.	NC_006685	CGC	5	480602	480616	15	0.00%	0.00%	33.33%	66.67%	58264734
46.	NC_006685	CGG	8	481263	481286	24	0.00%	0.00%	66.67%	33.33%	58264734
47.	NC_006685	CAC	4	483635	483646	12	33.33%	0.00%	0.00%	66.67%	Non-Coding
48.	NC_006685	CCG	5	483647	483661	15	0.00%	0.00%	33.33%	66.67%	Non-Coding
49.	NC_006685	AGA	4	487868	487879	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
50.	NC_006685	CAC	5	487930	487944	15	33.33%	0.00%	0.00%	66.67%	Non-Coding
51.	NC_006685	CAA	4	489214	489225	12	66.67%	0.00%	0.00%	33.33%	58264750
52.	NC_006685	GAA	4	492277	492288	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
53.	NC_006685	CAC	14	510006	510047	42	33.33%	0.00%	0.00%	66.67%	Non-Coding
54.	NC_006685	TTA	4	519686	519697	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
55.	NC_006685	TCA	4	524927	524938	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
56.	NC_006685	TCT	5	528178	528192	15	0.00%	66.67%	0.00%	33.33%	58264572
57.	NC_006685	CAC	5	528710	528724	15	33.33%	0.00%	0.00%	66.67%	Non-Coding
58.	NC_006685	ACG	5	540645	540659	15	33.33%	0.00%	33.33%	33.33%	Non-Coding
59.	NC_006685	GAA	6	544129	544146	18	66.67%	0.00%	33.33%	0.00%	58264584
60.	NC_006685	AGG	5	544160	544174	15	33.33%	0.00%	66.67%	0.00%	58264584
61.	NC_006685	GAA	4	561279	561290	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
62.	NC_006685	AGT	4	584242	584253	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
63.	NC_006685	CAA	4	592380	592391	12	66.67%	0.00%	0.00%	33.33%	Non-Coding
64.	NC_006685	ACA	6	605604	605621	18	66.67%	0.00%	0.00%	33.33%	58264654
65.	NC_006685	GAA	4	606344	606355	12	66.67%	0.00%	33.33%	0.00%	58264654
66.	NC_006685	AGG	4	661448	661459	12	33.33%	0.00%	66.67%	0.00%	58264702
67.	NC_006685	GAA	5	663485	663499	15	66.67%	0.00%	33.33%	0.00%	58264702
68.	NC_006685	GAT	4	669906	669917	12	33.33%	33.33%	33.33%	0.00%	58265638
69.	NC_006685	GAA	4	670014	670025	12	66.67%	0.00%	33.33%	0.00%	58265638
70.	NC_006685	GAA	4	683778	683789	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
71.	NC_006685	CTA	4	683845	683856	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
72.	NC_006685	AGA	5	684310	684324	15	66.67%	0.00%	33.33%	0.00%	58264732
73.	NC_006685	GAA	6	697286	697303	18	66.67%	0.00%	33.33%	0.00%	58264748
74.	NC_006685	TCT	4	697745	697756	12	0.00%	66.67%	0.00%	33.33%	58264748
75.	NC_006685	CAA	4	725088	725099	12	66.67%	0.00%	0.00%	33.33%	Non-Coding
76.	NC_006685	GCA	5	729786	729800	15	33.33%	0.00%	33.33%	33.33%	Non-Coding
77.	NC_006685	GAT	4	737825	737836	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
78.	NC_006685	GTA	5	746370	746384	15	33.33%	33.33%	33.33%	0.00%	Non-Coding
79.	NC_006685	AAG	4	751198	751209	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
80.	NC_006685	GAC	4	777719	777730	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
81.	NC_006685	CAG	4	795843	795854	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
82.	NC_006685	GAT	4	795897	795908	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
83.	NC_006685	TCG	4	890949	890960	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
84.	NC_006685	TGC	4	921102	921113	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
85.	NC_006685	GAT	4	925825	925836	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
86.	NC_006685	GGT	4	931300	931311	12	0.00%	33.33%	66.67%	0.00%	58264850
87.	NC_006685	AAG	4	940129	940140	12	66.67%	0.00%	33.33%	0.00%	58264864
88.	NC_006685	CCT	4	941994	942005	12	0.00%	33.33%	0.00%	66.67%	58264868
89.	NC_006685	AGA	4	949631	949642	12	66.67%	0.00%	33.33%	0.00%	58264872
90.	NC_006685	TGG	4	954949	954960	12	0.00%	33.33%	66.67%	0.00%	58264876
91.	NC_006685	TGG	4	965264	965275	12	0.00%	33.33%	66.67%	0.00%	58265570
92.	NC_006685	GCA	4	965782	965793	12	33.33%	0.00%	33.33%	33.33%	58265570
93.	NC_006685	AAG	4	966397	966408	12	66.67%	0.00%	33.33%	0.00%	58265570
94.	NC_006685	ACC	7	967956	967976	21	33.33%	0.00%	0.00%	66.67%	58264892
95.	NC_006685	CTT	4	975377	975388	12	0.00%	66.67%	0.00%	33.33%	58264904
96.	NC_006685	GAA	4	976489	976500	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
97.	NC_006685	TGC	4	977666	977677	12	0.00%	33.33%	33.33%	33.33%	58264908
98.	NC_006685	TCG	4	995961	995972	12	0.00%	33.33%	33.33%	33.33%	58264922
99.	NC_006685	GAG	4	1028780	1028791	12	33.33%	0.00%	66.67%	0.00%	58264988
100.	NC_006685	TAC	4	1045440	1045451	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
101.	NC_006685	TAC	4	1045548	1045559	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
102.	NC_006685	ACT	4	1046180	1046191	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
103.	NC_006685	ATC	4	1057328	1057339	12	33.33%	33.33%	0.00%	33.33%	58265672
104.	NC_006685	TCT	4	1065635	1065646	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
105.	NC_006685	TGT	4	1069650	1069661	12	0.00%	66.67%	33.33%	0.00%	58265016
106.	NC_006685	ATT	4	1070144	1070155	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
107.	NC_006685	ATT	4	1107929	1107940	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
108.	NC_006685	GAT	4	1117618	1117629	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
109.	NC_006685	CCT	4	1137480	1137491	12	0.00%	33.33%	0.00%	66.67%	58265074
110.	NC_006685	CGG	4	1152660	1152671	12	0.00%	0.00%	66.67%	33.33%	Non-Coding
111.	NC_006685	ATC	5	1156145	1156159	15	33.33%	33.33%	0.00%	33.33%	Non-Coding
112.	NC_006685	CCG	4	1156364	1156375	12	0.00%	0.00%	33.33%	66.67%	58264870
113.	NC_006685	CTG	4	1174612	1174623	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
114.	NC_006685	CTT	4	1223099	1223110	12	0.00%	66.67%	0.00%	33.33%	58265702
115.	NC_006685	GTA	5	1227422	1227436	15	33.33%	33.33%	33.33%	0.00%	Non-Coding
116.	NC_006685	GAA	4	1235542	1235553	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
117.	NC_006685	AGT	4	1235565	1235576	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
118.	NC_006685	TCA	4	1242493	1242504	12	33.33%	33.33%	0.00%	33.33%	58264960
119.	NC_006685	TAG	5	1243849	1243863	15	33.33%	33.33%	33.33%	0.00%	Non-Coding
120.	NC_006685	TAA	4	1243871	1243882	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
121.	NC_006685	AAT	4	1252425	1252436	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
122.	NC_006685	ATA	4	1261910	1261921	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
123.	NC_006685	GTG	4	1268207	1268218	12	0.00%	33.33%	66.67%	0.00%	Non-Coding
124.	NC_006685	CCG	4	1268855	1268866	12	0.00%	0.00%	33.33%	66.67%	58265688
125.	NC_006685	GCT	4	1269281	1269292	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
126.	NC_006685	GAT	4	1270446	1270457	12	33.33%	33.33%	33.33%	0.00%	58265006
127.	NC_006685	GTC	4	1282041	1282052	12	0.00%	33.33%	33.33%	33.33%	58265022
128.	NC_006685	GCA	7	1295086	1295106	21	33.33%	0.00%	33.33%	33.33%	58265042
129.	NC_006685	TCT	4	1305671	1305682	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
130.	NC_006685	ATA	4	1309985	1309996	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
131.	NC_006685	GAC	4	1310740	1310751	12	33.33%	0.00%	33.33%	33.33%	58265058
132.	NC_006685	CAT	4	1320617	1320628	12	33.33%	33.33%	0.00%	33.33%	58265096
133.	NC_006685	AGG	4	1320952	1320963	12	33.33%	0.00%	66.67%	0.00%	58265096
134.	NC_006685	TAG	4	1321508	1321519	12	33.33%	33.33%	33.33%	0.00%	58265096
135.	NC_006685	TGG	11	1321520	1321552	33	0.00%	33.33%	66.67%	0.00%	58265096
136.	NC_006685	CTT	4	1325701	1325712	12	0.00%	66.67%	0.00%	33.33%	58265102
137.	NC_006685	TCC	4	1339542	1339553	12	0.00%	33.33%	0.00%	66.67%	Non-Coding
138.	NC_006685	CAC	4	1382689	1382700	12	33.33%	0.00%	0.00%	66.67%	Non-Coding
139.	NC_006685	TAT	4	1382710	1382721	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
140.	NC_006685	CAT	4	1402502	1402513	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
141.	NC_006685	GAC	4	1405270	1405281	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
142.	NC_006685	ATA	4	1416556	1416567	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
143.	NC_006685	CAC	5	1421169	1421183	15	33.33%	0.00%	0.00%	66.67%	Non-Coding
144.	NC_006685	AAG	4	1421579	1421590	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
145.	NC_006685	TGA	4	1425056	1425067	12	33.33%	33.33%	33.33%	0.00%	58265720
146.	NC_006685	ACT	4	1440739	1440750	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
147.	NC_006685	CGA	4	1458905	1458916	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
148.	NC_006685	ACC	5	1464779	1464793	15	33.33%	0.00%	0.00%	66.67%	Non-Coding
149.	NC_006685	AGC	5	1483258	1483272	15	33.33%	0.00%	33.33%	33.33%	58265782
150.	NC_006685	CTG	4	1490986	1490997	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
151.	NC_006685	TTC	4	1491290	1491301	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
152.	NC_006685	GAT	4	1528393	1528404	12	33.33%	33.33%	33.33%	0.00%	58265302
153.	NC_006685	GAA	4	1531811	1531822	12	66.67%	0.00%	33.33%	0.00%	58265302
154.	NC_006685	GAA	4	1549849	1549860	12	66.67%	0.00%	33.33%	0.00%	Non-Coding
155.	NC_006685	CTC	4	1565371	1565382	12	0.00%	33.33%	0.00%	66.67%	58265424
156.	NC_006685	TTA	4	1570833	1570844	12	33.33%	66.67%	0.00%	0.00%	Non-Coding
157.	NC_006685	TCC	4	1575037	1575048	12	0.00%	33.33%	0.00%	66.67%	58265734
158.	NC_006685	CTG	4	1576703	1576714	12	0.00%	33.33%	33.33%	33.33%	58265734
159.	NC_006685	GGC	4	1578150	1578161	12	0.00%	0.00%	66.67%	33.33%	58265734
160.	NC_006685	TGC	5	1644447	1644461	15	0.00%	33.33%	33.33%	33.33%	58265192
161.	NC_006685	AAT	4	1649441	1649452	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
162.	NC_006685	CAT	4	1650546	1650557	12	33.33%	33.33%	0.00%	33.33%	58265200
163.	NC_006685	GCT	4	1653245	1653256	12	0.00%	33.33%	33.33%	33.33%	58265204
164.	NC_006685	GCA	4	1656954	1656965	12	33.33%	0.00%	33.33%	33.33%	58265208
165.	NC_006685	GAT	4	1658090	1658101	12	33.33%	33.33%	33.33%	0.00%	58265208
166.	NC_006685	TCT	4	1680959	1680970	12	0.00%	66.67%	0.00%	33.33%	58265248
167.	NC_006685	CTC	4	1741182	1741193	12	0.00%	33.33%	0.00%	66.67%	58265312
168.	NC_006685	CTG	4	1748051	1748062	12	0.00%	33.33%	33.33%	33.33%	Non-Coding
169.	NC_006685	AGA	6	1751304	1751321	18	66.67%	0.00%	33.33%	0.00%	58265320
170.	NC_006685	CGA	8	1766110	1766133	24	33.33%	0.00%	33.33%	33.33%	58265650
171.	NC_006685	GAT	4	1773323	1773334	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
172.	NC_006685	TGC	4	1776180	1776191	12	0.00%	33.33%	33.33%	33.33%	58265334
173.	NC_006685	CCA	4	1779174	1779185	12	33.33%	0.00%	0.00%	66.67%	58265336
174.	NC_006685	ATG	5	1780044	1780058	15	33.33%	33.33%	33.33%	0.00%	Non-Coding
175.	NC_006685	CCT	7	1793858	1793878	21	0.00%	33.33%	0.00%	66.67%	58265432
176.	NC_006685	CAG	8	1804479	1804502	24	33.33%	0.00%	33.33%	33.33%	58265444
177.	NC_006685	ACA	4	1804505	1804516	12	66.67%	0.00%	0.00%	33.33%	58265444
178.	NC_006685	GAC	4	1814448	1814459	12	33.33%	0.00%	33.33%	33.33%	Non-Coding
179.	NC_006685	ATA	4	1814460	1814471	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
180.	NC_006685	AAG	4	1846087	1846098	12	66.67%	0.00%	33.33%	0.00%	58265468
181.	NC_006685	GTC	4	1854554	1854565	12	0.00%	33.33%	33.33%	33.33%	58265656
182.	NC_006685	GTT	12	1879297	1879332	36	0.00%	66.67%	33.33%	0.00%	58265490
183.	NC_006685	ATA	4	1892236	1892247	12	66.67%	33.33%	0.00%	0.00%	Non-Coding
184.	NC_006685	GTC	6	1896047	1896064	18	0.00%	33.33%	33.33%	33.33%	Non-Coding
185.	NC_006685	CGC	4	1920471	1920482	12	0.00%	0.00%	33.33%	66.67%	Non-Coding
186.	NC_006685	CTT	4	1929296	1929307	12	0.00%	66.67%	0.00%	33.33%	Non-Coding
187.	NC_006685	GAA	5	1933323	1933337	15	66.67%	0.00%	33.33%	0.00%	58265582
188.	NC_006685	CTA	4	1958078	1958089	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
189.	NC_006685	CCA	4	1970400	1970411	12	33.33%	0.00%	0.00%	66.67%	58265532
190.	NC_006685	ATG	4	1989736	1989747	12	33.33%	33.33%	33.33%	0.00%	Non-Coding
191.	NC_006685	TAT	5	2030475	2030489	15	33.33%	66.67%	0.00%	0.00%	58265394
192.	NC_006685	CAT	4	2031877	2031888	12	33.33%	33.33%	0.00%	33.33%	Non-Coding
193.	NC_006685	TGA	5	2033451	2033465	15	33.33%	33.33%	33.33%	0.00%	58265344
194.	NC_006685	TCC	4	2053859	2053870	12	0.00%	33.33%	0.00%	66.67%	58265396
195.	NC_006685	TCC	4	2055437	2055448	12	0.00%	33.33%	0.00%	66.67%	58265396
196.	NC_006685	TCC	4	2055455	2055466	12	0.00%	33.33%	0.00%	66.67%	58265396
197.	NC_006685	TCC	4	2055473	2055484	12	0.00%	33.33%	0.00%	66.67%	58265396
198.	NC_006685	TCC	5	2055506	2055520	15	0.00%	33.33%	0.00%	66.67%	58265396
199.	NC_006685	GCT	4	2091650	2091661	12	0.00%	33.33%	33.33%	33.33%	Non-Coding

FungREP

List of Perfect Tri -nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21

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