List of Imperfect Hexa -nucleotide repeats in Cryptococcus neoformans var. neoformans JEC21

S. No. Genome ID Motif Iterations SSR Start SSR End Tract Length A% T% G% C% Protein ID
1.NC_006685AAATAA4161916422483.33%16.67%0.00%0.00%Non-Coding
2.NC_006685CCCCAT316985170021816.67%16.67%0.00%66.67%Non-Coding
3.NC_006685CCTCAG317003170201816.67%16.67%16.67%50.00%Non-Coding
4.NC_006685TTTTCT44868948711230.00%83.33%0.00%16.67%Non-Coding
5.NC_006685GAAGGA374598746161950.00%0.00%50.00%0.00%Non-Coding
6.NC_006685CCTAAA376512765291850.00%16.67%0.00%33.33%58264488
7.NC_006685TCCCGA377162771791816.67%16.67%16.67%50.00%58264488
8.NC_006685AGGAAG377278772951850.00%0.00%50.00%0.00%58264488
9.NC_006685ACCCTC478448784712416.67%16.67%0.00%66.67%58264488
10.NC_006685TGGAGA380368803851833.33%16.67%50.00%0.00%58264492
11.NC_006685AACGCA31150511150681850.00%0.00%16.67%33.33%58264346
12.NC_006685TTTCTT3201588201605180.00%83.33%0.00%16.67%58264424
13.NC_006685AGGATG32109672109841833.33%16.67%50.00%0.00%58264428
14.NC_006685TTGGGT3212173212191190.00%50.00%50.00%0.00%Non-Coding
15.NC_006685TCGAAT32285942286111833.33%33.33%16.67%16.67%58264458
16.NC_006685CTTCAA32304192304361833.33%33.33%0.00%33.33%58264458
17.NC_006685TCTTCC3254457254480240.00%50.00%0.00%50.00%58264482
18.NC_006685GCTGGG3286216286233180.00%16.67%66.67%16.67%58264508
19.NC_006685ATGGAC32937862938031833.33%16.67%33.33%16.67%58264526
20.NC_006685GCTTGT3298209298226180.00%50.00%33.33%16.67%58265616
21.NC_006685CCTTTT8310109310156480.00%66.67%0.00%33.33%58264548
22.NC_006685CTTCAT33103493103661816.67%50.00%0.00%33.33%58264548
23.NC_006685ATTGTG33104723104891816.67%50.00%33.33%0.00%58264548
24.NC_006685CAAAAA33142283142461983.33%0.00%0.00%16.67%Non-Coding
25.NC_006685GACGAG33153573153741833.33%0.00%50.00%16.67%58265602
26.NC_006685AGGGGG33163883164112416.67%0.00%83.33%0.00%Non-Coding
27.NC_006685CAGATC33200753200911733.33%16.67%16.67%33.33%Non-Coding
28.NC_006685ACCAAC33383303383471850.00%0.00%0.00%50.00%58264558
29.NC_006685CCTTAC33708403708571816.67%33.33%0.00%50.00%58265610
30.NC_006685TCTTTT3374532374549180.00%83.33%0.00%16.67%58264590
31.NC_006685AAATGA34479764479931866.67%16.67%16.67%0.00%58264700
32.NC_006685TGATCC34803784803951816.67%33.33%16.67%33.33%58264734
33.NC_006685GGGGGA44821514821742416.67%0.00%83.33%0.00%Non-Coding
34.NC_006685AGGGGG44822704822932416.67%0.00%83.33%0.00%Non-Coding
35.NC_006685CCCGCC3482381482398180.00%0.00%16.67%83.33%Non-Coding
36.NC_006685TTTATT34843214843381816.67%83.33%0.00%0.00%Non-Coding
37.NC_006685ACAAAA35571255571421883.33%0.00%0.00%16.67%Non-Coding
38.NC_006685AGCAAA35609745609911866.67%0.00%16.67%16.67%Non-Coding
39.NC_006685ATTTTT35865105865271816.67%83.33%0.00%0.00%Non-Coding
40.NC_006685TGGTGC3630219630236180.00%33.33%50.00%16.67%58264682
41.NC_006685AGGCTG36658396658561816.67%16.67%50.00%16.67%58264706
42.NC_006685GATGAG36698706698871833.33%16.67%50.00%0.00%58265638
43.NC_006685GCAGGG46814286814512416.67%0.00%66.67%16.67%58264724
44.NC_006685CTTCGT5693928693957300.00%50.00%16.67%33.33%58264744
45.NC_006685AAAAAT47044477044702483.33%16.67%0.00%0.00%Non-Coding
46.NC_006685AAAAAC37044777044931783.33%0.00%0.00%16.67%Non-Coding
47.NC_006685GTCTCT3705295705312180.00%50.00%16.67%33.33%Non-Coding
48.NC_006685TGTTTT4720572720596250.00%83.33%16.67%0.00%Non-Coding
49.NC_006685AAAAGG37381877382051966.67%0.00%33.33%0.00%Non-Coding
50.NC_006685AGAAAG38019308019471866.67%0.00%33.33%0.00%Non-Coding
51.NC_006685TGCATA38170168170341933.33%33.33%16.67%16.67%Non-Coding
52.NC_006685TCTTTA38209508209661716.67%66.67%0.00%16.67%Non-Coding
53.NC_006685TGCATA38471208471381933.33%33.33%16.67%16.67%Non-Coding
54.NC_006685TAAAGA38496298496451766.67%16.67%16.67%0.00%Non-Coding
55.NC_006685TATGCA38535618535791933.33%33.33%16.67%16.67%Non-Coding
56.NC_006685TAAAGA38583168583321766.67%16.67%16.67%0.00%Non-Coding
57.NC_006685TATGCA38935698935871933.33%33.33%16.67%16.67%Non-Coding
58.NC_006685CTCCCC4939831939854240.00%16.67%0.00%83.33%58264864
59.NC_006685GGCGGG5955148955177300.00%0.00%83.33%16.67%58264876
60.NC_006685TCTCCT3965889965906180.00%50.00%0.00%50.00%58265570
61.NC_006685TTTTCT4967213967236240.00%83.33%0.00%16.67%58264892
62.NC_006685TAGAAA39869279869441866.67%16.67%16.67%0.00%Non-Coding
63.NC_006685CATGCT3101224210122591816.67%33.33%16.67%33.33%58264966
64.NC_006685CACCTC3103660310366201816.67%16.67%0.00%66.67%58264996
65.NC_006685GAGATG4104018710402102433.33%16.67%50.00%0.00%Non-Coding
66.NC_006685TGCTGG310758131075830180.00%33.33%50.00%16.67%58265024
67.NC_006685TCTTCC310879421087959180.00%50.00%0.00%50.00%Non-Coding
68.NC_006685CTTTGC310885141088531180.00%50.00%16.67%33.33%Non-Coding
69.NC_006685TCTTCA4109983510998582416.67%50.00%0.00%33.33%58265044
70.NC_006685ATTATC3110123911012571933.33%50.00%0.00%16.67%Non-Coding
71.NC_006685GGAAAT3113633811363551850.00%16.67%33.33%0.00%Non-Coding
72.NC_006685GTACAA3113757211375891850.00%16.67%16.67%16.67%58265074
73.NC_006685TTCTGT311396821139699180.00%66.67%16.67%16.67%Non-Coding
74.NC_006685CTACTC3117993411799562316.67%33.33%0.00%50.00%Non-Coding
75.NC_006685TTTCCT312015141201531180.00%66.67%0.00%33.33%58264936
76.NC_006685GTGGAT4121115512111782416.67%33.33%50.00%0.00%Non-Coding
77.NC_006685GGGAAA3121127412112911850.00%0.00%50.00%0.00%Non-Coding
78.NC_006685GGAGAG3125347412534901733.33%0.00%66.67%0.00%58264974
79.NC_006685CTCTCC312547731254789170.00%33.33%0.00%66.67%58264978
80.NC_006685CGCTCG312558501255867180.00%16.67%33.33%50.00%58264982
81.NC_006685AGGTGC3127161212716291816.67%16.67%50.00%16.67%58265006
82.NC_006685ATGAAA3128945512894721866.67%16.67%16.67%0.00%Non-Coding
83.NC_006685AGAGGA3129609412961101750.00%0.00%50.00%0.00%58265046
84.NC_006685CAAAGG3133668913367061850.00%0.00%33.33%16.67%58265706
85.NC_006685GTGATG4136807413680992616.67%33.33%50.00%0.00%Non-Coding
86.NC_006685GACGGG3137622813762461916.67%0.00%66.67%16.67%58265090
87.NC_006685GACTCC3140843514084521816.67%16.67%16.67%50.00%58265132
88.NC_006685ACGGGC3146626014662771816.67%0.00%50.00%33.33%Non-Coding
89.NC_006685AAAAAG4150296615029892483.33%0.00%16.67%0.00%58265262
90.NC_006685TTCCCA3150565015056681916.67%33.33%0.00%50.00%58265270
91.NC_006685TTTGGG315613871561404180.00%50.00%50.00%0.00%Non-Coding
92.NC_006685GGCAGG3156730515673221816.67%0.00%66.67%16.67%58265424
93.NC_006685GAGGGG4157949315795162416.67%0.00%83.33%0.00%Non-Coding
94.NC_006685CTTTTC415891581589181240.00%66.67%0.00%33.33%58265134
95.NC_006685TTTTGT316024721602488170.00%83.33%16.67%0.00%58265154
96.NC_006685GAAAAG3161376916137861866.67%0.00%33.33%0.00%58265168
97.NC_006685CTGTAC3162754516275631916.67%33.33%16.67%33.33%58265186
98.NC_006685GACTAT3165476216547791833.33%33.33%16.67%16.67%58265204
99.NC_006685CACGAT4165772716577502433.33%16.67%16.67%33.33%58265208
100.NC_006685ATGAGG4165800716580302433.33%16.67%50.00%0.00%58265208
101.NC_006685AGGGAG3165803116580481833.33%0.00%66.67%0.00%58265208
102.NC_006685GACGAT4165806316580862433.33%16.67%33.33%16.67%58265208
103.NC_006685CAAGAA3165833016583471866.67%0.00%16.67%16.67%Non-Coding
104.NC_006685ACAGAA3165868216587001966.67%0.00%16.67%16.67%58265214
105.NC_006685CTACAC3166824316682601833.33%16.67%0.00%50.00%58265226
106.NC_006685TCCTCG316710221671039180.00%33.33%16.67%50.00%58265232
107.NC_006685ATATCC3167182016718371833.33%33.33%0.00%33.33%58265232
108.NC_006685CTTCAT3168091116809281816.67%50.00%0.00%33.33%58265248
109.NC_006685CATCCT7168098616810274216.67%33.33%0.00%50.00%58265248
110.NC_006685CCTGTT316812861681303180.00%50.00%16.67%33.33%58265248
111.NC_006685CCTGAG3172666617266831816.67%16.67%33.33%33.33%58265292
112.NC_006685CAGGAG3174334017433571833.33%0.00%50.00%16.67%58265316
113.NC_006685CAGGAG3174337017433871833.33%0.00%50.00%16.67%58265316
114.NC_006685CTGGCG417760081776031240.00%16.67%50.00%33.33%58265334
115.NC_006685CCTGCT417788431778866240.00%33.33%16.67%50.00%58265336
116.NC_006685CTACTC3177889817789151816.67%33.33%0.00%50.00%58265336
117.NC_006685GACCTG3177988617799031816.67%16.67%33.33%33.33%58265336
118.NC_006685CCCCTC317927921792809180.00%16.67%0.00%83.33%58265430
119.NC_006685TCCCTC317995931799610180.00%33.33%0.00%66.67%58265438
120.NC_006685TCTTGC417996411799664240.00%50.00%16.67%33.33%58265438
121.NC_006685GCCTTT318022311802248180.00%50.00%16.67%33.33%58265442
122.NC_006685TTGACC4180335018033732416.67%33.33%16.67%33.33%58265442
123.NC_006685CTTCTC318055771805594180.00%50.00%0.00%50.00%58265444
124.NC_006685GCTCCT318090941809111180.00%33.33%16.67%50.00%58265446
125.NC_006685CCTTGC318106791810696180.00%33.33%16.67%50.00%58265786
126.NC_006685GAACCA4184763518476582450.00%0.00%16.67%33.33%58265470
127.NC_006685CGTCCA3184790518479221816.67%16.67%16.67%50.00%Non-Coding
128.NC_006685AAAGGT3184939418494111850.00%16.67%33.33%0.00%58265472
129.NC_006685GTACTG3186887818688961916.67%33.33%33.33%16.67%Non-Coding
130.NC_006685GCACCG3187889118789081816.67%0.00%33.33%50.00%58265490
131.NC_006685CTTTTG318949541894971180.00%66.67%16.67%16.67%58265496
132.NC_006685CAGGTG3191340819134251816.67%16.67%50.00%16.67%58265504
133.NC_006685AAACAA3193379019338071883.33%0.00%0.00%16.67%58265516
134.NC_006685GGATTA3195392119539381833.33%33.33%33.33%0.00%Non-Coding
135.NC_006685TAGTCA3200050120005191933.33%33.33%16.67%16.67%58265542
136.NC_006685GATGAG3200731820073351833.33%16.67%50.00%0.00%Non-Coding
137.NC_006685GGATGA4203837320383962433.33%16.67%50.00%0.00%58265400
138.NC_006685TGGTAG3204583220458491816.67%33.33%50.00%0.00%58265348
139.NC_006685TGCCAG3204999420500111816.67%16.67%33.33%33.33%58265388
140.NC_006685GTACAA3205169320517101850.00%16.67%16.67%16.67%Non-Coding
141.NC_006685TCTTCC17205545520555561020.00%50.00%0.00%50.00%58265396
142.NC_006685CTCTGG320563792056396180.00%33.33%33.33%33.33%58265396
143.NC_006685ACCTCC3206096820609851816.67%16.67%0.00%66.67%Non-Coding
144.NC_006685TTCAAT3207259520726131933.33%50.00%0.00%16.67%58265384
145.NC_006685CTTTTT320763252076342180.00%83.33%0.00%16.67%58265356
146.NC_006685GACACT3208252620825441933.33%16.67%16.67%33.33%Non-Coding
147.NC_006685CGGGTG420847692084792240.00%16.67%66.67%16.67%58265358
148.NC_006685TGCAAG4208528320853062433.33%16.67%33.33%16.67%58265358
149.NC_006685GGAAGG3208644720864641833.33%0.00%66.67%0.00%58265360
150.NC_006685AAAGAA3209009720901141883.33%0.00%16.67%0.00%58265362
151.NC_006685GCGAGA3209396720939841833.33%0.00%50.00%16.67%58265378