List of
Perfect Penta
-nucleotide repeats in Yarrowia lipolytica CLIB122
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006068 | CATCC | 3 | 36398 | 36412 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 2. | NC_006068 | GTACT | 3 | 61070 | 61084 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 3. | NC_006068 | ATTAA | 3 | 82983 | 82997 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | Non-Coding |
| 4. | NC_006068 | GAAAA | 4 | 95775 | 95794 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 5. | NC_006068 | ATGTC | 4 | 99720 | 99739 | 20 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 6. | NC_006068 | AAATA | 3 | 125675 | 125689 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 7. | NC_006068 | ATAAA | 5 | 143899 | 143923 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 8. | NC_006068 | AATAA | 14 | 149293 | 149362 | 70 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 9. | NC_006068 | TATTT | 3 | 190546 | 190560 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 10. | NC_006068 | TTTAT | 4 | 194342 | 194361 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 11. | NC_006068 | TTATT | 6 | 205185 | 205214 | 30 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 12. | NC_006068 | ATTTA | 4 | 205221 | 205240 | 20 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 13. | NC_006068 | GTACT | 3 | 251188 | 251202 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 14. | NC_006068 | TGTTT | 3 | 274121 | 274135 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 15. | NC_006068 | ATAAA | 4 | 324387 | 324406 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 16. | NC_006068 | TACTG | 3 | 402178 | 402192 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 17. | NC_006068 | ACTGT | 3 | 451753 | 451767 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 18. | NC_006068 | TTCTT | 3 | 563931 | 563945 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NC_006068 | ATTTT | 4 | 564737 | 564756 | 20 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 20. | NC_006068 | GCCTT | 4 | 610344 | 610363 | 20 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 21. | NC_006068 | GGTGC | 3 | 615670 | 615684 | 15 | 0.00% | 20.00% | 60.00% | 20.00% | Non-Coding |
| 22. | NC_006068 | ATAAA | 4 | 652481 | 652500 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 23. | NC_006068 | TGGAA | 3 | 713736 | 713750 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | 50545964 |
| 24. | NC_006068 | GTACT | 3 | 725342 | 725356 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 25. | NC_006068 | CACCT | 3 | 788463 | 788477 | 15 | 20.00% | 20.00% | 0.00% | 60.00% | Non-Coding |
| 26. | NC_006068 | GTACA | 3 | 817649 | 817663 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 27. | NC_006068 | AGTAC | 3 | 825222 | 825236 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 28. | NC_006068 | TGTAC | 3 | 836086 | 836100 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 29. | NC_006068 | GTACT | 3 | 873420 | 873434 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 30. | NC_006068 | ACACA | 5 | 893902 | 893926 | 25 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 31. | NC_006068 | ACAAT | 3 | 899275 | 899289 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 32. | NC_006068 | TTTTA | 5 | 908538 | 908562 | 25 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 33. | NC_006068 | TACAG | 3 | 961646 | 961660 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 34. | NC_006068 | CAGTA | 3 | 962357 | 962371 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 35. | NC_006068 | TTTAT | 3 | 1023671 | 1023685 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 36. | NC_006068 | TATTT | 3 | 1073035 | 1073049 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 37. | NC_006068 | TAATT | 7 | 1096217 | 1096251 | 35 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 38. | NC_006068 | ATTTA | 3 | 1096254 | 1096268 | 15 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 39. | NC_006068 | ACAGC | 4 | 1130752 | 1130771 | 20 | 40.00% | 0.00% | 20.00% | 40.00% | Non-Coding |
| 40. | NC_006068 | TGTGT | 3 | 1319481 | 1319495 | 15 | 0.00% | 60.00% | 40.00% | 0.00% | Non-Coding |
| 41. | NC_006068 | TCTTT | 3 | 1419266 | 1419280 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 42. | NC_006068 | TGTTT | 3 | 1449663 | 1449677 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 43. | NC_006068 | TTTGT | 3 | 1573748 | 1573762 | 15 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 44. | NC_006068 | AACAC | 3 | 1680299 | 1680313 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 45. | NC_006068 | GTACA | 3 | 1794167 | 1794181 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 46. | NC_006068 | AATAA | 5 | 1813789 | 1813813 | 25 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 47. | NC_006068 | TGAGA | 3 | 1830687 | 1830701 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 48. | NC_006068 | CCAAA | 3 | 2102602 | 2102616 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 49. | NC_006068 | AGTTG | 3 | 2149985 | 2149999 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 50. | NC_006068 | TCTCC | 3 | 2316197 | 2316211 | 15 | 0.00% | 40.00% | 0.00% | 60.00% | Non-Coding |
| 51. | NC_006068 | TACTG | 3 | 2363098 | 2363112 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 52. | NC_006068 | AATGA | 3 | 2406491 | 2406505 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 53. | NC_006068 | CACGT | 3 | 2581261 | 2581275 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 54. | NC_006068 | CTTTG | 3 | 2649351 | 2649365 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 50547307 |
| 55. | NC_006068 | TTTTA | 3 | 2769557 | 2769571 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 56. | NC_006068 | GTACA | 3 | 2812728 | 2812742 | 15 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 57. | NC_006068 | GAAAA | 3 | 2834972 | 2834986 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 58. | NC_006068 | GTACT | 3 | 2840391 | 2840405 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 59. | NC_006068 | GGTTC | 3 | 2958615 | 2958629 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 60. | NC_006068 | TTATC | 3 | 2962123 | 2962137 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |