List of
Imperfect Penta
-nucleotide repeats in Kluyveromyces lactis NRRL Y-1140
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_006038 | GATAG | 3 | 39416 | 39429 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | 50303223 |
| 2. | NC_006038 | CATTA | 3 | 39979 | 39992 | 14 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 3. | NC_006038 | CTCAT | 5 | 42121 | 42145 | 25 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 4. | NC_006038 | AAAGA | 3 | 43958 | 43972 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 50303227 |
| 5. | NC_006038 | TGATG | 3 | 83178 | 83191 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | 50303271 |
| 6. | NC_006038 | AATCA | 3 | 88248 | 88261 | 14 | 60.00% | 20.00% | 0.00% | 20.00% | 50303277 |
| 7. | NC_006038 | AGTAT | 3 | 104606 | 104620 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 8. | NC_006038 | TGAGA | 4 | 121409 | 121428 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 9. | NC_006038 | AATTG | 3 | 133161 | 133175 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 50303325 |
| 10. | NC_006038 | TCTTT | 3 | 156141 | 156155 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | 50303341 |
| 11. | NC_006038 | ATTTG | 3 | 176511 | 176526 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 12. | NC_006038 | GATGA | 4 | 183107 | 183126 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 13. | NC_006038 | GATAT | 3 | 185912 | 185925 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 50303365 |
| 14. | NC_006038 | TATCG | 3 | 203950 | 203963 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | 50303383 |
| 15. | NC_006038 | GATGA | 4 | 204977 | 204996 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 16. | NC_006038 | GGCTT | 3 | 226195 | 226209 | 15 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 17. | NC_006038 | AAATG | 4 | 230795 | 230813 | 19 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 18. | NC_006038 | TTTTC | 3 | 235274 | 235287 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 19. | NC_006038 | TGCTG | 3 | 247631 | 247646 | 16 | 0.00% | 40.00% | 40.00% | 20.00% | Non-Coding |
| 20. | NC_006038 | GATGA | 5 | 254331 | 254355 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 21. | NC_006038 | TCAGT | 3 | 256426 | 256440 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | 50303433 |
| 22. | NC_006038 | AAGGG | 3 | 263015 | 263029 | 15 | 40.00% | 0.00% | 60.00% | 0.00% | 50303441 |
| 23. | NC_006038 | CTCTT | 3 | 268252 | 268267 | 16 | 0.00% | 60.00% | 0.00% | 40.00% | 50303447 |
| 24. | NC_006038 | CAAGA | 3 | 271868 | 271881 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | 50303449 |
| 25. | NC_006038 | CTCAT | 3 | 293805 | 293819 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 26. | NC_006038 | AATGG | 3 | 295112 | 295125 | 14 | 40.00% | 20.00% | 40.00% | 0.00% | 50303471 |
| 27. | NC_006038 | AGGAC | 3 | 303426 | 303440 | 15 | 40.00% | 0.00% | 40.00% | 20.00% | Non-Coding |
| 28. | NC_006038 | GTTCA | 3 | 310015 | 310028 | 14 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 29. | NC_006038 | GATGA | 4 | 323733 | 323752 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 30. | NC_006038 | TTAAG | 3 | 326315 | 326329 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 31. | NC_006038 | GAGTA | 3 | 337950 | 337964 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 32. | NC_006038 | TTATT | 3 | 368630 | 368644 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | 50303543 |
| 33. | NC_006038 | CTTTT | 3 | 370043 | 370057 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 34. | NC_006038 | AATAT | 3 | 388437 | 388451 | 15 | 60.00% | 40.00% | 0.00% | 0.00% | 50303567 |
| 35. | NC_006038 | TCTTT | 3 | 399889 | 399902 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 36. | NC_006038 | AAAGA | 3 | 400747 | 400762 | 16 | 80.00% | 0.00% | 20.00% | 0.00% | 50303581 |
| 37. | NC_006038 | TAAGG | 4 | 417048 | 417068 | 21 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 38. | NC_006038 | TCATC | 4 | 422955 | 422973 | 19 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 39. | NC_006038 | CCTAG | 5 | 424850 | 424874 | 25 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 40. | NC_006038 | TTTGA | 3 | 430651 | 430666 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | 50303605 |
| 41. | NC_006038 | ATTGA | 3 | 468071 | 468084 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 50303645 |
| 42. | NC_006038 | ATTTT | 3 | 488146 | 488160 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 43. | NC_006038 | TCTCA | 3 | 530525 | 530539 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 44. | NC_006038 | TGGGT | 3 | 542790 | 542804 | 15 | 0.00% | 40.00% | 60.00% | 0.00% | Non-Coding |
| 45. | NC_006038 | CTTTG | 3 | 552278 | 552292 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 50303735 |
| 46. | NC_006038 | TTTAA | 3 | 553618 | 553631 | 14 | 40.00% | 60.00% | 0.00% | 0.00% | 50303737 |
| 47. | NC_006038 | AGATG | 3 | 559681 | 559700 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 48. | NC_006038 | TTCTT | 3 | 559739 | 559752 | 14 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 49. | NC_006038 | AAAGA | 3 | 563610 | 563623 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | 50303745 |
| 50. | NC_006038 | AAATT | 3 | 572827 | 572842 | 16 | 60.00% | 40.00% | 0.00% | 0.00% | 50303753 |
| 51. | NC_006038 | GATGA | 4 | 623140 | 623159 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 52. | NC_006038 | CGTTT | 4 | 633947 | 633965 | 19 | 0.00% | 60.00% | 20.00% | 20.00% | 50303815 |
| 53. | NC_006038 | CATCG | 3 | 648735 | 648749 | 15 | 20.00% | 20.00% | 20.00% | 40.00% | Non-Coding |
| 54. | NC_006038 | CAAAA | 3 | 678801 | 678816 | 16 | 80.00% | 0.00% | 0.00% | 20.00% | 50303855 |
| 55. | NC_006038 | ATTTT | 3 | 681039 | 681053 | 15 | 20.00% | 80.00% | 0.00% | 0.00% | Non-Coding |
| 56. | NC_006038 | ATCAA | 3 | 687074 | 687088 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 57. | NC_006038 | GATGA | 5 | 708737 | 708761 | 25 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 58. | NC_006038 | GATGA | 6 | 729455 | 729484 | 30 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 59. | NC_006038 | CTCAT | 3 | 731039 | 731053 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | 50303899 |
| 60. | NC_006038 | AAAAG | 3 | 817624 | 817638 | 15 | 80.00% | 0.00% | 20.00% | 0.00% | 50303985 |
| 61. | NC_006038 | TAAAA | 3 | 835427 | 835440 | 14 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 62. | NC_006038 | TCTGC | 3 | 848749 | 848763 | 15 | 0.00% | 40.00% | 20.00% | 40.00% | Non-Coding |
| 63. | NC_006038 | GATGC | 3 | 849337 | 849351 | 15 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 64. | NC_006038 | TTTTG | 4 | 867602 | 867621 | 20 | 0.00% | 80.00% | 20.00% | 0.00% | Non-Coding |
| 65. | NC_006038 | AATTG | 3 | 869792 | 869805 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 50304041 |
| 66. | NC_006038 | GATGA | 3 | 874039 | 874053 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 67. | NC_006038 | TTGGA | 3 | 878036 | 878050 | 15 | 20.00% | 40.00% | 40.00% | 0.00% | Non-Coding |
| 68. | NC_006038 | AAAAG | 3 | 884769 | 884782 | 14 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 69. | NC_006038 | AAGTA | 3 | 887259 | 887273 | 15 | 60.00% | 20.00% | 20.00% | 0.00% | Non-Coding |
| 70. | NC_006038 | CGTAA | 4 | 912759 | 912778 | 20 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 71. | NC_006038 | ACCAA | 3 | 917911 | 917925 | 15 | 60.00% | 0.00% | 0.00% | 40.00% | Non-Coding |
| 72. | NC_006038 | AAAAG | 4 | 918709 | 918728 | 20 | 80.00% | 0.00% | 20.00% | 0.00% | Non-Coding |
| 73. | NC_006038 | CTGTA | 3 | 935714 | 935728 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 74. | NC_006038 | CAAGA | 3 | 940571 | 940585 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 75. | NC_006038 | AATTC | 3 | 948231 | 948245 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 76. | NC_006038 | GAGAT | 7 | 953965 | 953999 | 35 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 77. | NC_006038 | ATCTG | 3 | 957493 | 957507 | 15 | 20.00% | 40.00% | 20.00% | 20.00% | Non-Coding |
| 78. | NC_006038 | AGATG | 4 | 962638 | 962658 | 21 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 79. | NC_006038 | ATACT | 3 | 969297 | 969311 | 15 | 40.00% | 40.00% | 0.00% | 20.00% | Non-Coding |
| 80. | NC_006038 | TTGAA | 3 | 973563 | 973576 | 14 | 40.00% | 40.00% | 20.00% | 0.00% | 50304147 |
| 81. | NC_006038 | AACAT | 3 | 980059 | 980073 | 15 | 60.00% | 20.00% | 0.00% | 20.00% | Non-Coding |
| 82. | NC_006038 | CTTGT | 3 | 1000453 | 1000466 | 14 | 0.00% | 60.00% | 20.00% | 20.00% | 50304177 |
| 83. | NC_006038 | AGTTT | 3 | 1014831 | 1014844 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | Non-Coding |
| 84. | NC_006038 | TGAGA | 4 | 1024027 | 1024046 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 85. | NC_006038 | TTGTC | 3 | 1024742 | 1024756 | 15 | 0.00% | 60.00% | 20.00% | 20.00% | 50304199 |
| 86. | NC_006038 | AAGAC | 3 | 1034654 | 1034667 | 14 | 60.00% | 0.00% | 20.00% | 20.00% | Non-Coding |
| 87. | NC_006038 | ATTGG | 3 | 1049320 | 1049333 | 14 | 20.00% | 40.00% | 40.00% | 0.00% | 50304223 |
| 88. | NC_006038 | AATGG | 3 | 1055542 | 1055556 | 15 | 40.00% | 20.00% | 40.00% | 0.00% | Non-Coding |
| 89. | NC_006038 | CCATT | 3 | 1083843 | 1083857 | 15 | 20.00% | 40.00% | 0.00% | 40.00% | Non-Coding |
| 90. | NC_006038 | GAAGA | 4 | 1102850 | 1102869 | 20 | 60.00% | 0.00% | 40.00% | 0.00% | 50304285 |
| 91. | NC_006038 | ATTGA | 3 | 1121016 | 1121030 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | Non-Coding |
| 92. | NC_006038 | GAACT | 5 | 1121069 | 1121093 | 25 | 40.00% | 20.00% | 20.00% | 20.00% | Non-Coding |
| 93. | NC_006038 | ATGAT | 3 | 1133714 | 1133728 | 15 | 40.00% | 40.00% | 20.00% | 0.00% | 50304319 |
| 94. | NC_006038 | ATAAA | 4 | 1168650 | 1168669 | 20 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 95. | NC_006038 | TCATT | 3 | 1191329 | 1191342 | 14 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 96. | NC_006038 | TTGAT | 3 | 1207087 | 1207100 | 14 | 20.00% | 60.00% | 20.00% | 0.00% | 50304391 |
| 97. | NC_006038 | AGATG | 4 | 1215449 | 1215468 | 20 | 40.00% | 20.00% | 40.00% | 0.00% | 50304397 |
| 98. | NC_006038 | TTGAT | 3 | 1216840 | 1216855 | 16 | 20.00% | 60.00% | 20.00% | 0.00% | 50304399 |
| 99. | NC_006038 | AATTT | 3 | 1218046 | 1218061 | 16 | 40.00% | 60.00% | 0.00% | 0.00% | Non-Coding |
| 100. | NC_006038 | TTACT | 3 | 1223412 | 1223426 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | 50304405 |
| 101. | NC_006038 | GAAAC | 3 | 1246273 | 1246287 | 15 | 60.00% | 0.00% | 20.00% | 20.00% | 50304427 |
| 102. | NC_006038 | ATAAA | 3 | 1280982 | 1280996 | 15 | 80.00% | 20.00% | 0.00% | 0.00% | Non-Coding |
| 103. | NC_006038 | TTACT | 3 | 1287624 | 1287638 | 15 | 20.00% | 60.00% | 0.00% | 20.00% | Non-Coding |
| 104. | NC_006038 | CTTTT | 3 | 1299360 | 1299374 | 15 | 0.00% | 80.00% | 0.00% | 20.00% | Non-Coding |
| 105. | NC_006038 | AGGTC | 4 | 1308586 | 1308605 | 20 | 20.00% | 20.00% | 40.00% | 20.00% | Non-Coding |
| 106. | NC_006038 | CACAA | 3 | 1317668 | 1317681 | 14 | 60.00% | 0.00% | 0.00% | 40.00% | 50304493 |