List of
Imperfect Tri
-nucleotide repeats in Encephalitozoon cuniculi GB-M1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_003230 | AGA | 6 | 846 | 862 | 17 | 66.67% | 0.00% | 33.33% | 0.00% | 19172962 |
| 2. | NC_003230 | TCA | 4 | 2246 | 2257 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | Non-Coding |
| 3. | NC_003230 | GCA | 4 | 3618 | 3628 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | Non-Coding |
| 4. | NC_003230 | TGA | 4 | 6311 | 6322 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19172966 |
| 5. | NC_003230 | GGA | 4 | 7322 | 7334 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | Non-Coding |
| 6. | NC_003230 | TTC | 4 | 9339 | 9350 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19172970 |
| 7. | NC_003230 | TCC | 4 | 9435 | 9445 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 19172970 |
| 8. | NC_003230 | GAA | 4 | 13439 | 13449 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 9. | NC_003230 | TCT | 4 | 15827 | 15838 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 10. | NC_003230 | AAG | 4 | 17885 | 17896 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19172975 |
| 11. | NC_003230 | CAA | 4 | 18028 | 18039 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19172976 |
| 12. | NC_003230 | TCT | 4 | 18070 | 18081 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19172976 |
| 13. | NC_003230 | ATC | 4 | 21876 | 21887 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19172979 |
| 14. | NC_003230 | CTT | 4 | 21939 | 21950 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19172979 |
| 15. | NC_003230 | GAA | 4 | 22739 | 22750 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19172980 |
| 16. | NC_003230 | TGG | 4 | 25902 | 25913 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 19172983 |
| 17. | NC_003230 | CAT | 4 | 26960 | 26970 | 11 | 33.33% | 33.33% | 0.00% | 33.33% | 19172984 |
| 18. | NC_003230 | ATA | 4 | 27777 | 27788 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | 19172984 |
| 19. | NC_003230 | ATC | 4 | 36971 | 36982 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19172989 |
| 20. | NC_003230 | GAT | 4 | 41292 | 41302 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | 19172994 |
| 21. | NC_003230 | AGG | 4 | 49092 | 49102 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19173000 |
| 22. | NC_003230 | TTC | 4 | 50333 | 50344 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173002 |
| 23. | NC_003230 | CAT | 4 | 50371 | 50382 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19173002 |
| 24. | NC_003230 | TCT | 4 | 50952 | 50963 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173002 |
| 25. | NC_003230 | CTT | 4 | 52983 | 52995 | 13 | 0.00% | 66.67% | 0.00% | 33.33% | 19173003 |
| 26. | NC_003230 | CTC | 4 | 53829 | 53841 | 13 | 0.00% | 33.33% | 0.00% | 66.67% | 19173003 |
| 27. | NC_003230 | CAT | 4 | 56693 | 56704 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19173004 |
| 28. | NC_003230 | AGA | 4 | 56856 | 56866 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19173004 |
| 29. | NC_003230 | GAT | 4 | 57543 | 57554 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19173005 |
| 30. | NC_003230 | TGT | 4 | 61931 | 61942 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19173011 |
| 31. | NC_003230 | AGC | 4 | 67632 | 67643 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19173012 |
| 32. | NC_003230 | AGA | 4 | 71090 | 71101 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19173015 |
| 33. | NC_003230 | CCT | 4 | 73119 | 73130 | 12 | 0.00% | 33.33% | 0.00% | 66.67% | 19173016 |
| 34. | NC_003230 | ACT | 4 | 74895 | 74906 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19173017 |
| 35. | NC_003230 | GAG | 4 | 75362 | 75373 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173018 |
| 36. | NC_003230 | GGA | 4 | 76732 | 76743 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173018 |
| 37. | NC_003230 | AGG | 4 | 80579 | 80590 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173022 |
| 38. | NC_003230 | TGC | 4 | 83583 | 83594 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19173026 |
| 39. | NC_003230 | GAG | 4 | 83754 | 83765 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173026 |
| 40. | NC_003230 | ACC | 4 | 86006 | 86017 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | 19173027 |
| 41. | NC_003230 | TCC | 4 | 87271 | 87281 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 19173028 |
| 42. | NC_003230 | CAG | 4 | 88792 | 88804 | 13 | 33.33% | 0.00% | 33.33% | 33.33% | 19173028 |
| 43. | NC_003230 | CTT | 4 | 90351 | 90362 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173030 |
| 44. | NC_003230 | CGT | 4 | 91294 | 91305 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19173030 |
| 45. | NC_003230 | AGG | 4 | 93215 | 93226 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173032 |
| 46. | NC_003230 | GAG | 5 | 94017 | 94030 | 14 | 33.33% | 0.00% | 66.67% | 0.00% | 19173033 |
| 47. | NC_003230 | TGT | 4 | 94335 | 94346 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19173034 |
| 48. | NC_003230 | GGA | 4 | 96054 | 96065 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173036 |
| 49. | NC_003230 | AGA | 4 | 102488 | 102498 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19173041 |
| 50. | NC_003230 | GTC | 4 | 102544 | 102555 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19173041 |
| 51. | NC_003230 | CTT | 4 | 103338 | 103349 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173043 |
| 52. | NC_003230 | TCC | 5 | 103356 | 103370 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 19173043 |
| 53. | NC_003230 | CTT | 4 | 103457 | 103468 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173043 |
| 54. | NC_003230 | ACT | 4 | 105730 | 105741 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19173045 |
| 55. | NC_003230 | GAG | 4 | 107412 | 107422 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19173047 |
| 56. | NC_003230 | TCC | 5 | 108118 | 108132 | 15 | 0.00% | 33.33% | 0.00% | 66.67% | 19173048 |
| 57. | NC_003230 | TGT | 4 | 110653 | 110663 | 11 | 0.00% | 66.67% | 33.33% | 0.00% | Non-Coding |
| 58. | NC_003230 | TGG | 4 | 110928 | 110939 | 12 | 0.00% | 33.33% | 66.67% | 0.00% | 19173050 |
| 59. | NC_003230 | GCG | 4 | 110991 | 111002 | 12 | 0.00% | 0.00% | 66.67% | 33.33% | 19173050 |
| 60. | NC_003230 | GAG | 4 | 111941 | 111951 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19173051 |
| 61. | NC_003230 | AGA | 4 | 113042 | 113052 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19173051 |
| 62. | NC_003230 | GAC | 4 | 113483 | 113493 | 11 | 33.33% | 0.00% | 33.33% | 33.33% | 19173051 |
| 63. | NC_003230 | CTT | 4 | 114065 | 114075 | 11 | 0.00% | 66.67% | 0.00% | 33.33% | Non-Coding |
| 64. | NC_003230 | GTT | 4 | 114206 | 114217 | 12 | 0.00% | 66.67% | 33.33% | 0.00% | 19173052 |
| 65. | NC_003230 | AAG | 4 | 117323 | 117333 | 11 | 66.67% | 0.00% | 33.33% | 0.00% | 19173055 |
| 66. | NC_003230 | CAT | 4 | 119416 | 119427 | 12 | 33.33% | 33.33% | 0.00% | 33.33% | 19173056 |
| 67. | NC_003230 | GGA | 4 | 124266 | 124277 | 12 | 33.33% | 0.00% | 66.67% | 0.00% | 19173058 |
| 68. | NC_003230 | GGA | 4 | 126566 | 126576 | 11 | 33.33% | 0.00% | 66.67% | 0.00% | 19173061 |
| 69. | NC_003230 | AGG | 4 | 126896 | 126908 | 13 | 33.33% | 0.00% | 66.67% | 0.00% | 19173061 |
| 70. | NC_003230 | AAG | 4 | 133884 | 133895 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19173068 |
| 71. | NC_003230 | AAC | 4 | 136415 | 136426 | 12 | 66.67% | 0.00% | 0.00% | 33.33% | 19173071 |
| 72. | NC_003230 | AGA | 4 | 140094 | 140105 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19173075 |
| 73. | NC_003230 | GAC | 4 | 140438 | 140449 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19173075 |
| 74. | NC_003230 | TAA | 4 | 140578 | 140589 | 12 | 66.67% | 33.33% | 0.00% | 0.00% | Non-Coding |
| 75. | NC_003230 | AGC | 4 | 146068 | 146079 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19173080 |
| 76. | NC_003230 | CCA | 4 | 148172 | 148183 | 12 | 33.33% | 0.00% | 0.00% | 66.67% | Non-Coding |
| 77. | NC_003230 | GAC | 5 | 155897 | 155911 | 15 | 33.33% | 0.00% | 33.33% | 33.33% | 19173090 |
| 78. | NC_003230 | CAG | 4 | 160441 | 160452 | 12 | 33.33% | 0.00% | 33.33% | 33.33% | 19173093 |
| 79. | NC_003230 | GAT | 4 | 161102 | 161113 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19173093 |
| 80. | NC_003230 | TCT | 4 | 168117 | 168128 | 12 | 0.00% | 66.67% | 0.00% | 33.33% | 19173098 |
| 81. | NC_003230 | GCT | 4 | 170350 | 170360 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 19173099 |
| 82. | NC_003230 | GTA | 4 | 174300 | 174311 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 83. | NC_003230 | TGA | 4 | 176330 | 176341 | 12 | 33.33% | 33.33% | 33.33% | 0.00% | 19173106 |
| 84. | NC_003230 | CTC | 4 | 176864 | 176874 | 11 | 0.00% | 33.33% | 0.00% | 66.67% | 19173107 |
| 85. | NC_003230 | TCG | 4 | 181889 | 181900 | 12 | 0.00% | 33.33% | 33.33% | 33.33% | 19173110 |
| 86. | NC_003230 | TGC | 4 | 183095 | 183105 | 11 | 0.00% | 33.33% | 33.33% | 33.33% | 19173110 |
| 87. | NC_003230 | AAG | 4 | 184305 | 184316 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19173111 |
| 88. | NC_003230 | TAT | 4 | 184754 | 184765 | 12 | 33.33% | 66.67% | 0.00% | 0.00% | 19173111 |
| 89. | NC_003230 | AGA | 4 | 188055 | 188066 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | 19173116 |
| 90. | NC_003230 | CAA | 4 | 193332 | 193342 | 11 | 66.67% | 0.00% | 0.00% | 33.33% | Non-Coding |
| 91. | NC_003230 | TGA | 4 | 193642 | 193652 | 11 | 33.33% | 33.33% | 33.33% | 0.00% | Non-Coding |
| 92. | NC_003230 | AGA | 4 | 193681 | 193692 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 93. | NC_003230 | GAA | 5 | 194164 | 194178 | 15 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |
| 94. | NC_003230 | AGA | 4 | 194214 | 194225 | 12 | 66.67% | 0.00% | 33.33% | 0.00% | Non-Coding |