List of
Imperfect Tetra
-nucleotide repeats in Encephalitozoon cuniculi GB-M1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_003230 | CCCG | 3 | 98 | 109 | 12 | 0.00% | 0.00% | 25.00% | 75.00% | Non-Coding |
| 2. | NC_003230 | CCCA | 3 | 2351 | 2361 | 11 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 3. | NC_003230 | CCCA | 3 | 4112 | 4123 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | Non-Coding |
| 4. | NC_003230 | TGAA | 3 | 5848 | 5860 | 13 | 50.00% | 25.00% | 25.00% | 0.00% | 19172966 |
| 5. | NC_003230 | TCCT | 3 | 6433 | 6444 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19172966 |
| 6. | NC_003230 | ACCC | 3 | 11513 | 11524 | 12 | 25.00% | 0.00% | 0.00% | 75.00% | 19172971 |
| 7. | NC_003230 | CTTA | 3 | 13160 | 13171 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | Non-Coding |
| 8. | NC_003230 | CTAT | 3 | 14026 | 14036 | 11 | 25.00% | 50.00% | 0.00% | 25.00% | 19172972 |
| 9. | NC_003230 | CTTT | 3 | 16502 | 16512 | 11 | 0.00% | 75.00% | 0.00% | 25.00% | 19172974 |
| 10. | NC_003230 | TGGA | 3 | 32465 | 32476 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 19172988 |
| 11. | NC_003230 | TCCT | 3 | 37819 | 37830 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19172989 |
| 12. | NC_003230 | TTTC | 3 | 51466 | 51477 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 19173002 |
| 13. | NC_003230 | GGGT | 3 | 55759 | 55770 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | 19173004 |
| 14. | NC_003230 | GCAA | 3 | 56115 | 56127 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | 19173004 |
| 15. | NC_003230 | AGAA | 3 | 59617 | 59628 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19173008 |
| 16. | NC_003230 | CAAG | 3 | 60191 | 60201 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 19173009 |
| 17. | NC_003230 | ACCT | 3 | 62020 | 62031 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 19173011 |
| 18. | NC_003230 | TAAA | 3 | 67645 | 67656 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 19173012 |
| 19. | NC_003230 | TCCC | 3 | 71953 | 71964 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 19173015 |
| 20. | NC_003230 | AAAG | 3 | 78129 | 78140 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19173019 |
| 21. | NC_003230 | AGCA | 3 | 78529 | 78539 | 11 | 50.00% | 0.00% | 25.00% | 25.00% | 19173019 |
| 22. | NC_003230 | GATT | 3 | 82115 | 82125 | 11 | 25.00% | 50.00% | 25.00% | 0.00% | 19173023 |
| 23. | NC_003230 | TAAA | 3 | 85309 | 85319 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 24. | NC_003230 | TTCT | 3 | 86431 | 86443 | 13 | 0.00% | 75.00% | 0.00% | 25.00% | 19173028 |
| 25. | NC_003230 | TTCC | 3 | 94167 | 94178 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19173033 |
| 26. | NC_003230 | AGGG | 3 | 96775 | 96785 | 11 | 25.00% | 0.00% | 75.00% | 0.00% | 19173036 |
| 27. | NC_003230 | AGGC | 3 | 99089 | 99099 | 11 | 25.00% | 0.00% | 50.00% | 25.00% | 19173036 |
| 28. | NC_003230 | CATC | 3 | 100042 | 100054 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 19173038 |
| 29. | NC_003230 | CCAA | 3 | 102301 | 102312 | 12 | 50.00% | 0.00% | 0.00% | 50.00% | 19173041 |
| 30. | NC_003230 | TCCC | 3 | 104519 | 104529 | 11 | 0.00% | 25.00% | 0.00% | 75.00% | 19173043 |
| 31. | NC_003230 | CCCT | 3 | 106016 | 106027 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 19173046 |
| 32. | NC_003230 | GATG | 3 | 110945 | 110957 | 13 | 25.00% | 25.00% | 50.00% | 0.00% | 19173050 |
| 33. | NC_003230 | CCCT | 3 | 114364 | 114375 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 19173052 |
| 34. | NC_003230 | CTCC | 3 | 116106 | 116117 | 12 | 0.00% | 25.00% | 0.00% | 75.00% | 19173054 |
| 35. | NC_003230 | AAGG | 3 | 117676 | 117688 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 19173055 |
| 36. | NC_003230 | AGAA | 3 | 127558 | 127568 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 19173062 |
| 37. | NC_003230 | GAAA | 3 | 130515 | 130525 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 19173066 |
| 38. | NC_003230 | GTCA | 3 | 138206 | 138216 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19173074 |
| 39. | NC_003230 | GTGG | 3 | 147703 | 147714 | 12 | 0.00% | 25.00% | 75.00% | 0.00% | 19173082 |
| 40. | NC_003230 | AAAC | 3 | 148242 | 148252 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | Non-Coding |
| 41. | NC_003230 | GTTT | 3 | 165254 | 165265 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | Non-Coding |
| 42. | NC_003230 | CTTT | 3 | 170099 | 170110 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | 19173099 |
| 43. | NC_003230 | TTAA | 3 | 171725 | 171736 | 12 | 50.00% | 50.00% | 0.00% | 0.00% | 19173101 |
| 44. | NC_003230 | TAAA | 3 | 174403 | 174413 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |
| 45. | NC_003230 | CTGT | 3 | 175387 | 175397 | 11 | 0.00% | 50.00% | 25.00% | 25.00% | 19173104 |
| 46. | NC_003230 | TATC | 3 | 178469 | 178480 | 12 | 25.00% | 50.00% | 0.00% | 25.00% | 19173109 |
| 47. | NC_003230 | TTGT | 3 | 180590 | 180601 | 12 | 0.00% | 75.00% | 25.00% | 0.00% | 19173110 |
| 48. | NC_003230 | GATA | 3 | 182662 | 182672 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | 19173110 |
| 49. | NC_003230 | TGTC | 3 | 190239 | 190250 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | Non-Coding |
| 50. | NC_003230 | ATAG | 3 | 191157 | 191167 | 11 | 50.00% | 25.00% | 25.00% | 0.00% | Non-Coding |
| 51. | NC_003230 | AAAT | 3 | 191536 | 191546 | 11 | 75.00% | 25.00% | 0.00% | 0.00% | Non-Coding |