List of
Imperfect Tetra
-nucleotide repeats in Encephalitozoon cuniculi GB-M1
| S. No. |
Genome ID |
Motif |
Iterations |
SSR Start |
SSR End |
Tract Length |
A% |
T% |
G% |
C% |
Protein ID |
| 1. | NC_003229 | GTCC | 3 | 1161 | 1171 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 19073922 |
| 2. | NC_003229 | TCAA | 3 | 1535 | 1546 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | Non-Coding |
| 3. | NC_003229 | ATCC | 3 | 3076 | 3086 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 4. | NC_003229 | AGGG | 3 | 3760 | 3771 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 19073924 |
| 5. | NC_003229 | TCCT | 3 | 4173 | 4184 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19073924 |
| 6. | NC_003229 | CCTT | 3 | 9938 | 9949 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19073928 |
| 7. | NC_003229 | GTCA | 3 | 14383 | 14393 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19073931 |
| 8. | NC_003229 | ATAC | 3 | 15944 | 15955 | 12 | 50.00% | 25.00% | 0.00% | 25.00% | 19073932 |
| 9. | NC_003229 | TTTG | 3 | 17933 | 17943 | 11 | 0.00% | 75.00% | 25.00% | 0.00% | 19073933 |
| 10. | NC_003229 | AAAG | 3 | 22018 | 22029 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19073937 |
| 11. | NC_003229 | AAGG | 3 | 22228 | 22240 | 13 | 50.00% | 0.00% | 50.00% | 0.00% | 19073937 |
| 12. | NC_003229 | AAAG | 3 | 23280 | 23291 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19073938 |
| 13. | NC_003229 | GTAC | 3 | 36418 | 36428 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19073951 |
| 14. | NC_003229 | ATGG | 3 | 37741 | 37752 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 19073953 |
| 15. | NC_003229 | CCTT | 3 | 39333 | 39344 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19073954 |
| 16. | NC_003229 | ACAA | 3 | 39588 | 39599 | 12 | 75.00% | 0.00% | 0.00% | 25.00% | 19073954 |
| 17. | NC_003229 | GGAT | 3 | 49511 | 49522 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 19073963 |
| 18. | NC_003229 | CTAC | 3 | 52976 | 52986 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | 19073967 |
| 19. | NC_003229 | TTTA | 3 | 56446 | 56456 | 11 | 25.00% | 75.00% | 0.00% | 0.00% | 19073969 |
| 20. | NC_003229 | GGAA | 3 | 60237 | 60248 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 19073972 |
| 21. | NC_003229 | TCTT | 3 | 63148 | 63159 | 12 | 0.00% | 75.00% | 0.00% | 25.00% | Non-Coding |
| 22. | NC_003229 | CTCA | 3 | 64635 | 64647 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 19073976 |
| 23. | NC_003229 | CCAG | 3 | 67075 | 67085 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 19073977 |
| 24. | NC_003229 | GGAT | 3 | 67733 | 67743 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 19073977 |
| 25. | NC_003229 | CATC | 3 | 81342 | 81353 | 12 | 25.00% | 25.00% | 0.00% | 50.00% | 19073986 |
| 26. | NC_003229 | TGGA | 3 | 83275 | 83285 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 19073987 |
| 27. | NC_003229 | TGAC | 3 | 83738 | 83748 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19073987 |
| 28. | NC_003229 | GGAT | 3 | 86369 | 86380 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 19073990 |
| 29. | NC_003229 | CCAG | 3 | 87340 | 87350 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 19073991 |
| 30. | NC_003229 | ACAG | 3 | 92290 | 92302 | 13 | 50.00% | 0.00% | 25.00% | 25.00% | 19073996 |
| 31. | NC_003229 | CTGC | 3 | 111024 | 111034 | 11 | 0.00% | 25.00% | 25.00% | 50.00% | 19074015 |
| 32. | NC_003229 | GAAG | 3 | 119964 | 119975 | 12 | 50.00% | 0.00% | 50.00% | 0.00% | 19074026 |
| 33. | NC_003229 | GGAT | 3 | 126763 | 126773 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | 19074030 |
| 34. | NC_003229 | GCCA | 3 | 128140 | 128150 | 11 | 25.00% | 0.00% | 25.00% | 50.00% | 19074030 |
| 35. | NC_003229 | CTTG | 3 | 129284 | 129296 | 13 | 0.00% | 50.00% | 25.00% | 25.00% | 19074031 |
| 36. | NC_003229 | AGTT | 3 | 135125 | 135136 | 12 | 25.00% | 50.00% | 25.00% | 0.00% | 19074032 |
| 37. | NC_003229 | GCTT | 3 | 143487 | 143498 | 12 | 0.00% | 50.00% | 25.00% | 25.00% | 19074040 |
| 38. | NC_003229 | AGGG | 3 | 145300 | 145311 | 12 | 25.00% | 0.00% | 75.00% | 0.00% | 19074041 |
| 39. | NC_003229 | ACAA | 3 | 146557 | 146567 | 11 | 75.00% | 0.00% | 0.00% | 25.00% | 19074042 |
| 40. | NC_003229 | GTCC | 3 | 155101 | 155112 | 12 | 0.00% | 25.00% | 25.00% | 50.00% | 19074049 |
| 41. | NC_003229 | AGTC | 3 | 155675 | 155685 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19074049 |
| 42. | NC_003229 | TCAG | 3 | 159161 | 159171 | 11 | 25.00% | 25.00% | 25.00% | 25.00% | 19074051 |
| 43. | NC_003229 | TCCA | 3 | 165491 | 165503 | 13 | 25.00% | 25.00% | 0.00% | 50.00% | 19074056 |
| 44. | NC_003229 | CAGG | 3 | 166824 | 166835 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | 19074057 |
| 45. | NC_003229 | AAAG | 3 | 167286 | 167297 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19074058 |
| 46. | NC_003229 | AAAG | 3 | 174216 | 174226 | 11 | 75.00% | 0.00% | 25.00% | 0.00% | 19074063 |
| 47. | NC_003229 | AAAG | 3 | 174304 | 174315 | 12 | 75.00% | 0.00% | 25.00% | 0.00% | 19074063 |
| 48. | NC_003229 | GGAT | 3 | 174433 | 174444 | 12 | 25.00% | 25.00% | 50.00% | 0.00% | 19074063 |
| 49. | NC_003229 | AAAT | 3 | 174716 | 174727 | 12 | 75.00% | 25.00% | 0.00% | 0.00% | 19074063 |
| 50. | NC_003229 | GGAA | 3 | 177849 | 177859 | 11 | 50.00% | 0.00% | 50.00% | 0.00% | 19074065 |
| 51. | NC_003229 | TTAA | 3 | 178031 | 178041 | 11 | 50.00% | 50.00% | 0.00% | 0.00% | Non-Coding |
| 52. | NC_003229 | CTTC | 3 | 180316 | 180327 | 12 | 0.00% | 50.00% | 0.00% | 50.00% | 19074068 |
| 53. | NC_003229 | TCCA | 3 | 182342 | 182352 | 11 | 25.00% | 25.00% | 0.00% | 50.00% | Non-Coding |
| 54. | NC_003229 | GCAT | 3 | 185309 | 185321 | 13 | 25.00% | 25.00% | 25.00% | 25.00% | Non-Coding |
| 55. | NC_003229 | GGAT | 3 | 194854 | 194864 | 11 | 25.00% | 25.00% | 50.00% | 0.00% | Non-Coding |
| 56. | NC_003229 | GGCA | 3 | 196289 | 196300 | 12 | 25.00% | 0.00% | 50.00% | 25.00% | Non-Coding |
| 57. | NC_003229 | CGGG | 3 | 196655 | 196666 | 12 | 0.00% | 0.00% | 75.00% | 25.00% | Non-Coding |