MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Yersinia pestis biovar Microtus str. 91001 plasmid pCRY

Total Repeats: 47

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_005814	GAA	2	6	11	16	66.67 %	0 %	33.33 %	0 %	Non-Coding
2	NC_005814	GGC	2	6	45	50	0 %	0 %	66.67 %	33.33 %	Non-Coding
3	NC_005814	GCC	2	6	82	87	0 %	0 %	33.33 %	66.67 %	Non-Coding
4	NC_005814	ATCC	2	8	119	126	25 %	25 %	0 %	50 %	Non-Coding
5	NC_005814	CAA	2	6	195	200	66.67 %	0 %	0 %	33.33 %	Non-Coding
6	NC_005814	T	7	7	471	477	0 %	100 %	0 %	0 %	Non-Coding
7	NC_005814	GTAA	2	8	495	502	50 %	25 %	25 %	0 %	Non-Coding
8	NC_005814	ATT	2	6	550	555	33.33 %	66.67 %	0 %	0 %	Non-Coding
9	NC_005814	CAG	2	6	574	579	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
10	NC_005814	TGG	2	6	583	588	0 %	33.33 %	66.67 %	0 %	Non-Coding
11	NC_005814	CCG	2	6	602	607	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_005814	ATT	2	6	652	657	33.33 %	66.67 %	0 %	0 %	Non-Coding
13	NC_005814	T	6	6	672	677	0 %	100 %	0 %	0 %	Non-Coding
14	NC_005814	ATC	2	6	1795	1800	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_005814	CTAT	2	8	1815	1822	25 %	50 %	0 %	25 %	Non-Coding
16	NC_005814	T	6	6	1855	1860	0 %	100 %	0 %	0 %	Non-Coding
17	NC_005814	AAGCG	2	10	1883	1892	40 %	0 %	40 %	20 %	Non-Coding
18	NC_005814	TTGTT	2	10	2269	2278	0 %	80 %	20 %	0 %	Non-Coding
19	NC_005814	ACAT	2	8	2286	2293	50 %	25 %	0 %	25 %	Non-Coding
20	NC_005814	AT	3	6	2336	2341	50 %	50 %	0 %	0 %	Non-Coding
21	NC_005814	TTA	2	6	2353	2358	33.33 %	66.67 %	0 %	0 %	Non-Coding
22	NC_005814	CGG	2	6	2468	2473	0 %	0 %	66.67 %	33.33 %	Non-Coding
23	NC_005814	GGA	2	6	2498	2503	33.33 %	0 %	66.67 %	0 %	Non-Coding
24	NC_005814	GCTG	2	8	3527	3534	0 %	25 %	50 %	25 %	Non-Coding
25	NC_005814	GTT	2	6	3535	3540	0 %	66.67 %	33.33 %	0 %	Non-Coding
26	NC_005814	TCA	2	6	3549	3554	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
27	NC_005814	T	7	7	3570	3576	0 %	100 %	0 %	0 %	Non-Coding
28	NC_005814	GCT	2	6	4624	4629	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_005814	CGG	2	6	4647	4652	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_005814	G	6	6	4659	4664	0 %	0 %	100 %	0 %	Non-Coding
31	NC_005814	TGA	2	6	9490	9495	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
32	NC_005814	GC	3	6	9523	9528	0 %	0 %	50 %	50 %	Non-Coding
33	NC_005814	C	6	6	9552	9557	0 %	0 %	0 %	100 %	Non-Coding
34	NC_005814	TAA	2	6	13935	13940	66.67 %	33.33 %	0 %	0 %	Non-Coding
35	NC_005814	CA	3	6	14596	14601	50 %	0 %	0 %	50 %	Non-Coding
36	NC_005814	AGC	2	6	14963	14968	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
37	NC_005814	T	6	6	14976	14981	0 %	100 %	0 %	0 %	Non-Coding
38	NC_005814	TA	3	6	17880	17885	50 %	50 %	0 %	0 %	Non-Coding
39	NC_005814	TA	3	6	18396	18401	50 %	50 %	0 %	0 %	Non-Coding
40	NC_005814	GACG	2	8	18429	18436	25 %	0 %	50 %	25 %	Non-Coding
41	NC_005814	ATTAT	2	10	19082	19091	40 %	60 %	0 %	0 %	Non-Coding
42	NC_005814	TA	3	6	19092	19097	50 %	50 %	0 %	0 %	Non-Coding
43	NC_005814	CA	3	6	19807	19812	50 %	0 %	0 %	50 %	Non-Coding
44	NC_005814	ATT	2	6	20727	20732	33.33 %	66.67 %	0 %	0 %	Non-Coding
45	NC_005814	TA	3	6	20931	20936	50 %	50 %	0 %	0 %	Non-Coding
46	NC_005814	AAC	2	6	21603	21608	66.67 %	0 %	0 %	33.33 %	Non-Coding
47	NC_005814	TTG	2	6	21692	21697	0 %	66.67 %	33.33 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.