MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Tropheryma whipplei TW08/27

Total Repeats: 2548

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
2501	NC_004551	GATT	2	8	896181	896188	25 %	50 %	25 %	0 %	Non-Coding
2502	NC_004551	TTAT	2	8	896231	896238	25 %	75 %	0 %	0 %	Non-Coding
2503	NC_004551	TCCT	2	8	896240	896247	0 %	50 %	0 %	50 %	Non-Coding
2504	NC_004551	GTC	2	6	896316	896321	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2505	NC_004551	CA	5	10	897724	897733	50 %	0 %	0 %	50 %	Non-Coding
2506	NC_004551	CCA	2	6	899940	899945	33.33 %	0 %	0 %	66.67 %	Non-Coding
2507	NC_004551	AC	3	6	899949	899954	50 %	0 %	0 %	50 %	Non-Coding
2508	NC_004551	TC	3	6	899988	899993	0 %	50 %	0 %	50 %	Non-Coding
2509	NC_004551	GA	3	6	900016	900021	50 %	0 %	50 %	0 %	Non-Coding
2510	NC_004551	GAGC	2	8	900127	900134	25 %	0 %	50 %	25 %	Non-Coding
2511	NC_004551	AGC	2	6	900145	900150	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2512	NC_004551	CGT	2	6	900182	900187	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2513	NC_004551	CTCG	2	8	903361	903368	0 %	25 %	25 %	50 %	Non-Coding
2514	NC_004551	TAT	2	6	903379	903384	33.33 %	66.67 %	0 %	0 %	Non-Coding
2515	NC_004551	TG	3	6	903467	903472	0 %	50 %	50 %	0 %	Non-Coding
2516	NC_004551	TGT	2	6	903582	903587	0 %	66.67 %	33.33 %	0 %	Non-Coding
2517	NC_004551	TTC	2	6	904943	904948	0 %	66.67 %	0 %	33.33 %	Non-Coding
2518	NC_004551	ACCC	2	8	907082	907089	25 %	0 %	0 %	75 %	Non-Coding
2519	NC_004551	GTCT	2	8	907099	907106	0 %	50 %	25 %	25 %	Non-Coding
2520	NC_004551	ACC	2	6	907122	907127	33.33 %	0 %	0 %	66.67 %	Non-Coding
2521	NC_004551	ACT	2	6	907181	907186	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2522	NC_004551	GAG	2	6	908773	908778	33.33 %	0 %	66.67 %	0 %	Non-Coding
2523	NC_004551	CCG	2	6	910117	910122	0 %	0 %	33.33 %	66.67 %	Non-Coding
2524	NC_004551	GCT	2	6	910164	910169	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
2525	NC_004551	CGG	2	6	910170	910175	0 %	0 %	66.67 %	33.33 %	Non-Coding
2526	NC_004551	ACA	2	6	913102	913107	66.67 %	0 %	0 %	33.33 %	Non-Coding
2527	NC_004551	ACA	2	6	913120	913125	66.67 %	0 %	0 %	33.33 %	Non-Coding
2528	NC_004551	TAC	2	6	913196	913201	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2529	NC_004551	GAG	2	6	913239	913244	33.33 %	0 %	66.67 %	0 %	Non-Coding
2530	NC_004551	AT	3	6	914295	914300	50 %	50 %	0 %	0 %	Non-Coding
2531	NC_004551	CGG	2	6	914301	914306	0 %	0 %	66.67 %	33.33 %	Non-Coding
2532	NC_004551	GGCCA	2	10	914314	914323	20 %	0 %	40 %	40 %	Non-Coding
2533	NC_004551	ACAG	2	8	914349	914356	50 %	0 %	25 %	25 %	Non-Coding
2534	NC_004551	GAA	2	6	914365	914370	66.67 %	0 %	33.33 %	0 %	Non-Coding
2535	NC_004551	GC	3	6	915629	915634	0 %	0 %	50 %	50 %	Non-Coding
2536	NC_004551	AG	3	6	916382	916387	50 %	0 %	50 %	0 %	Non-Coding
2537	NC_004551	GTT	2	6	918001	918006	0 %	66.67 %	33.33 %	0 %	Non-Coding
2538	NC_004551	CTA	2	6	921298	921303	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2539	NC_004551	A	6	6	921412	921417	100 %	0 %	0 %	0 %	Non-Coding
2540	NC_004551	GCGG	2	8	921418	921425	0 %	0 %	75 %	25 %	Non-Coding
2541	NC_004551	ACA	2	6	921435	921440	66.67 %	0 %	0 %	33.33 %	Non-Coding
2542	NC_004551	TAC	2	6	921445	921450	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
2543	NC_004551	CGA	2	6	925777	925782	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
2544	NC_004551	ATT	2	6	925792	925797	33.33 %	66.67 %	0 %	0 %	Non-Coding
2545	NC_004551	CCTTTT	2	12	925848	925859	0 %	66.67 %	0 %	33.33 %	Non-Coding
2546	NC_004551	GTAC	2	8	925869	925876	25 %	25 %	25 %	25 %	Non-Coding
2547	NC_004551	TCAA	2	8	925898	925905	50 %	25 %	0 %	25 %	Non-Coding
2548	NC_004551	AATTC	2	10	925918	925927	40 %	40 %	0 %	20 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.